Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0015996

Physical Location & Seq

Genomic Coordinates Forward (+)

58267008 .. 58270636

Gene Structure 3629 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0453100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1872 bp

ATGATTGGGCCAATGCGTTTTGTTCACTCCAATTCCCTCCACATCATTTATTTGCTTCTCAAGAATCCCGATCATCTAACCAGAAAGCGCTTTTCCCAACCGCTGCTTTTCACTCCCATCCCAACTGTCACCCCACACACCCACATTGCCAGAAGCACTTTTCACTTCCCACAAATGGACCGGCCGGACTCCTCCTCTTCCGACGACGACGACGATCGCCAGAACCTAATCGACCAGAACGAGCGGAAGCATCAGCAGCTCCCCAGCCCTCGATCCGCCACCACTTTCCAAATCGACGACGGCGACGTCGACCACCACCGCCACCACCGCGAAATACGACGGCGTTTCGCCTCCCTCAAGCTCAGCGACTTGTTCAACAAACGCTTCCTCATCTTCTTCATCTTCATCCCTCTCTTCGTCCTCATCCTCTTCTTCACCACCGACATCAAGAGCCTCTTCTTCTCCCGCCTCTCCCTCCGCGAGTCCGAATTGCGAGCTCTCTTCTTGCTCCGCCAGCAGCAGCTCGGTCTCTTCGGCCTCTGGAACCAAACGCATCCCAATTCCACTTCGAATCACTCCAATTCCGAACTCCAGGATTTCAAATCCTCGATTTTGAAGCAGATTTCGTTGAATAAGGAGATTCAGCAGGTGTTGTTAGCTCCGCACAGCTCCGGGAACTCATCATCGGAATCCGAAGATTTCCGGGATCCGAGCCTCCTCGGCGATCGGTGTGGAGTAGTGGACCAGCGGTTTTCGGAGAGAAGAACAATCGAGTGGAAGCCTAATTCCGATAAGTACTTGTTGGCGATTTGCGTTTCGGGCCAAATGTCCAACCATTTGATCTGCTTAGAGAAGCACATGTTCTTCGCAGCATTGCTGAACCGGGTTTTGGTGATTCCTAGCCCTAAAGTGGATTACCAGTACAGCACTGTGTTGGACATTGAGCACATTAACAAATGCATTGGGAGAAAAGTTGTGGTTACTTTCGAGGAATTGGCCGAGGAGAAGAAGAATCACATCCACATTGATAGGTTCATTTGCTATTTTTCGAAGCCGATGCTTTGCTATGTGGATGATGAGCATCTCAAGAAGCTGAAGGCATTGGGAATTTCGTTCAAGAGTCGTGAGCCTGCTTGGGGGGAAGATGTGAAGAAGCCGAGCAAGAAGACTGTGCAGGATGTTATATCCTCTTCACATGAGAATGAAGAGCCTTTAGTTGCATCAAATGAAGTGATTAGCCAGAGTGAGAAGGAAAACTGGTTTTGGGGTCTGTCTGAAGTAGATGATGGAAAGATAAATGGCACCCAAACCTTTTCATCCCATGAGAATGAAAAGCCTTCAGTCCCACCAAATGAAGTGATTAGCCAACTTGAGAAGGAAGCTGGGATTTGGGGTTCGACTGAAGCAGATAATGGAAAGGTAAATGGCACCCAGACCTTTTCCATCAATGAGAACAAAGACCCTTTATTTGCATCGAATGAAGTGCTTAGCCAGATGGAGAAGGAAGCAAATACAGGGTCTGGTGGTCCGACTGAAGCATACAATGGAAAAGTAAATGGCACCCCTACCTTATCATCAATTAAAGACGAGGACCTTGGCTTTGACGAGTTCACCTTGCAGGATATGCCAAGTGATGAACTTCCCCCAATGAGCTCTGACAGTGATGCTTTGACTCTGTCTAGTTCGGAGCAATCGGATTCAAGCATTCAATCAGACGAATTAGAACCAAATGAGAACGATGAATGCAACAAGAATCTTCAACTCAATGGGACCAAAGTTGAATCCCAAGAAGATGAAACACCTTCAACACCGGCTACTGTTACTAAAAAGTGGGTCCGATGGAGGCTCATTGAAGTACCAGAAGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009937 GO:0009966 GO:0009987 GO:0010033 GO:0010476 GO:0010498 GO:0010646 GO:0019005 GO:0019538 GO:0019941 GO:0023051 GO:0023052 GO:0030163 GO:0031461 GO:0032870 GO:0032991 GO:0033993 GO:0042221 GO:0043161 GO:0043170 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1990234 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box-like

Protein Analysis

623

Amino Acids

70.96

Weight (kDa)

5.33

Isoelectric Point (pI)

50.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48170
fragaria_vesca	FvH4_6g40870
malus_domestica	MD09G1123900.v1.1 MD17G1114700.v1.1
prunus_persica	Prupe.3G200200_v2.0.a1
pyrus_communis	pycom09g04800 pycom17g10600
rosa_chinensis	RchiOBHm_Chr2g0156431
rosa_laevigata	RLG00000020912
rosa_multiflora	Rmu_sc0005392.1_g000020
rosa_roxburghii	Rroxscaffold_2G00093040
rosa_rugosa	Rorug02G0453100
rosa_samantha	Rh2BG531400 Rh2DG540400
rosa_wichuraiana	Rw2G042810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	637
AasI	GACNNNNNNGTC	1 cut(s)	305
AatII	GACGTC	1 cut(s)	309
Acc36I	ACCTGC	1 cut(s)	637
AccB1I	GGYRCC	3 cut(s)	1301, 1427, 1559
AccBSI	CCGCTC	1 cut(s)	244
AccI	GTMKAC	1 cut(s)	309
AccII	CGCG	2 cut(s)	330, 480
AclWI	GGATC	3 cut(s)	267, 701, 714
AcoI	YGGCCR	2 cut(s)	182, 996
AcsI	RAATTY	1 cut(s)	1107
AcuI	CTGAAG	5 cut(s)	1115, 1296, 1323, 1422, 1554
AcyI	GRCGYC	1 cut(s)	306
AfaI	GTAC	3 cut(s)	797, 923, 1857
AfeI	AGCGCT	1 cut(s)	89
AfiI	CCNNNNNNNGG	4 cut(s)	175, 889, 910, 1136
AflIII	ACRYGT	1 cut(s)	858
AjnI	CCWGG	1 cut(s)	591
AjuI	GAANNNNNNNTTGG	2 cut(s)	872, 904
AloI	GAACNNNNNNTCC	2 cut(s)	1378, 1410
Alw21I	GWGCWC	3 cut(s)	499, 948, 1655
Alw26I	GTCTC	1 cut(s)	533
AlwI	GGATC	3 cut(s)	267, 701, 714
AlwNI	CAGNNNCTG	1 cut(s)	1520
Aor51HI	AGCGCT	1 cut(s)	89
AoxI	GGCC	5 cut(s)	8, 182, 535, 820, 996
ApeKI	GCWGC	5 cut(s)	103, 256, 517, 520, 869
ApoI	RAATTY	1 cut(s)	1107
ArsI	GACNNNNNNTTYG	6 cut(s)	1451, 1483, 1502, 1534, 1583, 1615
AspLEI	GCGC	1 cut(s)	90
AspS9I	GGNCC	8 cut(s)	8, 178, 742, 820, 1526, 1591, 1770, 1834
AsuC2I	CCSGG	3 cut(s)	673, 704, 884
AsuHPI	GGTGA	4 cut(s)	121, 427, 904, 1603
AsuII	TTCGAA	2 cut(s)	569, 1049
AvaII	GGWCC	6 cut(s)	178, 742, 1526, 1591, 1770, 1834
BamHI	GGATCC	1 cut(s)	706
BanI	GGYRCC	3 cut(s)	1301, 1427, 1559
BanII	GRGCYC	2 cut(s)	499, 1655
BbsI	GAAGAC	1 cut(s)	1172
Bbv12I	GWGCWC	3 cut(s)	499, 948, 1655
BbvI	GCAGC	5 cut(s)	90, 268, 529, 532, 881
BccI	CCATC	5 cut(s)	125, 1280, 1451, 1489, 1833
BceAI	ACGGC	2 cut(s)	316, 356
BcgI	CGANNNNNNTGC	4 cut(s)	1039, 1073, 1465, 1499
BciT130I	CCWGG	1 cut(s)	593
BcnI	CCSGG	3 cut(s)	673, 704, 884
BcoDI	GTCTC	1 cut(s)	533
BfaI	CTAG	2 cut(s)	900, 1680
BfoI	RGCGCY	1 cut(s)	91
BfuAI	ACCTGC	1 cut(s)	637
BglI	GCCNNNNNGGC	1 cut(s)	720
BisI	GCNGC	5 cut(s)	104, 257, 518, 521, 870
BlpI	GCTNAGC	2 cut(s)	362, 1487
BlsI	GCNGC	5 cut(s)	105, 258, 519, 522, 871
BmcAI	AGTACT	1 cut(s)	797
Bme1390I	CCNGG	4 cut(s)	593, 673, 704, 884
Bme18I	GGWCC	6 cut(s)	178, 742, 1526, 1591, 1770, 1834
BmgT120I	GGNCC	8 cut(s)	8, 178, 742, 820, 1526, 1591, 1770, 1834
BmiI	GGNNCC	7 cut(s)	545, 708, 1303, 1429, 1561, 1771, 1835
BmrFI	CCNGG	4 cut(s)	593, 673, 704, 884
BmsI	GCATC	7 cut(s)	259, 562, 1047, 1090, 1229, 1481, 1654
BpiI	GAAGAC	1 cut(s)	1172
BpmI	CTGGAG	1 cut(s)	575
Bpu1102I	GCTNAGC	2 cut(s)	362, 1487
Bpu14I	TTCGAA	2 cut(s)	569, 1049
BpuEI	CTTGAG	4 cut(s)	44, 341, 1070, 1391
BpuMI	CCSGG	3 cut(s)	673, 704, 884
BsaBI	GATNNNNATC	1 cut(s)	1080
BsaHI	GRCGYC	1 cut(s)	306
BsaI	GGTCTC	1 cut(s)	533
BsaJI	CCNNGG	3 cut(s)	718, 999, 1594
Bsc4I	CCNNNNNNNGG	4 cut(s)	175, 889, 910, 1136
Bse118I	RCCGGY	2 cut(s)	180, 1810
Bse1I	ACTGG	2 cut(s)	919, 1262
Bse3DI	GCAATG	2 cut(s)	144, 872
Bse8I	GATNNNNATC	1 cut(s)	1080
BseBI	CCWGG	1 cut(s)	593
BseDI	CCNNGG	3 cut(s)	718, 999, 1594
BseGI	GGATG	8 cut(s)	117, 405, 423, 553, 1017, 1078, 1183, 1316
BseJI	GATNNNNATC	1 cut(s)	1080
BseLI	CCNNNNNNNGG	4 cut(s)	175, 889, 910, 1136
BseMI	GCAATG	2 cut(s)	144, 872
BseMII	CTCAG	1 cut(s)	376
BseNI	ACTGG	2 cut(s)	919, 1262
BseRI	GAGGAG	4 cut(s)	181, 184, 707, 1016
BseX3I	CGGCCG	1 cut(s)	182
BseXI	GCAGC	5 cut(s)	90, 268, 529, 532, 881
BseYI	CCCAGC	2 cut(s)	263, 1382
BsgI	GTGCAG	1 cut(s)	1193
Bsh1236I	CGCG	2 cut(s)	330, 480
Bsh1285I	CGRYCG	3 cut(s)	185, 217, 727
BshFI	GGCC	5 cut(s)	10, 184, 537, 822, 998
BshNI	GGYRCC	3 cut(s)	1301, 1427, 1559
BsiEI	CGRYCG	3 cut(s)	185, 217, 727
BsiHKAI	GWGCWC	3 cut(s)	499, 948, 1655
BsiSI	CCGG	6 cut(s)	181, 185, 672, 703, 883, 1811
BslFI	GGGAC	2 cut(s)	1328, 1783
BslI	CCNNNNNNNGG	4 cut(s)	175, 889, 910, 1136
BsmAI	GTCTC	1 cut(s)	533
BsmFI	GGGAC	2 cut(s)	1328, 1783
BsmI	GAATGC	2 cut(s)	1704, 1748
BsnI	GGCC	5 cut(s)	10, 184, 537, 822, 998
Bso31I	GGTCTC	1 cut(s)	533
Bsp119I	TTCGAA	2 cut(s)	569, 1049
Bsp1286I	GDGCHC	3 cut(s)	499, 948, 1655
Bsp143I	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
Bsp1720I	GCTNAGC	2 cut(s)	362, 1487
BspANI	GGCC	5 cut(s)	10, 184, 537, 822, 998
BspCNI	CTCAG	1 cut(s)	375
BspFNI	CGCG	2 cut(s)	330, 480
BspLI	GGNNCC	7 cut(s)	545, 708, 1303, 1429, 1561, 1771, 1835
BspMI	ACCTGC	1 cut(s)	637
BspPI	GGATC	3 cut(s)	267, 701, 714
BspQI	GCTCTTC	1 cut(s)	1200
BspT104I	TTCGAA	2 cut(s)	569, 1049
BspT107I	GGYRCC	3 cut(s)	1301, 1427, 1559
BspTNI	GGTCTC	1 cut(s)	533
BsrBI	CCGCTC	1 cut(s)	244
BsrDI	GCAATG	2 cut(s)	144, 872
BsrFI	RCCGGY	2 cut(s)	180, 1810
BsrI	ACTGG	2 cut(s)	919, 1262
BssAI	RCCGGY	2 cut(s)	180, 1810
BssECI	CCNNGG	3 cut(s)	718, 999, 1594
BssMI	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
BssNI	GRCGYC	1 cut(s)	306
BssT1I	CCWWGG	1 cut(s)	1594
Bst2UI	CCWGG	1 cut(s)	593
Bst4CI	ACNGT	5 cut(s)	127, 931, 1171, 1661, 1819
Bst6I	CTCTTC	8 cut(s)	202, 419, 434, 461, 506, 536, 1195, 1200
BstACI	GRCGYC	1 cut(s)	306
BstAPI	GCANNNNNTGC	1 cut(s)	1624
BstBI	TTCGAA	2 cut(s)	569, 1049
BstC8I	GCNNGC	3 cut(s)	495, 515, 1131
BstDEI	CTNAG	4 cut(s)	362, 847, 1487, 1869
BstF5I	GGATG	8 cut(s)	117, 405, 423, 553, 1017, 1078, 1183, 1316
BstFNI	CGCG	2 cut(s)	330, 480
BstH2I	RGCGCY	1 cut(s)	91
BstHHI	GCGC	1 cut(s)	90
BstKTI	GATC	6 cut(s)	73, 217, 275, 709, 727, 843
BstMAI	GTCTC	1 cut(s)	533
BstMBI	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
BstMCI	CGRYCG	3 cut(s)	185, 217, 727
BstMWI	GCNNNNNNNGC	6 cut(s)	256, 327, 514, 720, 819, 1624
BstNI	CCWGG	1 cut(s)	593
BstNSI	RCATGY	1 cut(s)	862
BstSCI	CCNGG	4 cut(s)	591, 671, 702, 882
BstUI	CGCG	2 cut(s)	330, 480
BstV1I	GCAGC	5 cut(s)	90, 268, 529, 532, 881
BstV2I	GAAGAC	1 cut(s)	1172
BstX2I	RGATCY	1 cut(s)	706
BstYI	RGATCY	1 cut(s)	706
BstZI	CGGCCG	1 cut(s)	182
BsuRI	GGCC	5 cut(s)	10, 184, 537, 822, 998
BtsCI	GGATG	8 cut(s)	117, 405, 423, 553, 1017, 1078, 1183, 1316
BtsIMutI	CAGTG	2 cut(s)	927, 1666
BveI	ACCTGC	1 cut(s)	637
Cac8I	GCNNGC	3 cut(s)	495, 515, 1131
CaiI	CAGNNNCTG	1 cut(s)	1520
CfoI	GCGC	1 cut(s)	90
Cfr10I	RCCGGY	2 cut(s)	180, 1810
Cfr13I	GGNCC	8 cut(s)	8, 178, 742, 820, 1526, 1591, 1770, 1834
Csp6I	GTAC	3 cut(s)	796, 922, 1856
CviAII	CATG	3 cut(s)	859, 1196, 1322
CviQI	GTAC	3 cut(s)	796, 922, 1856
DdeI	CTNAG	4 cut(s)	362, 847, 1487, 1869
DpnI	GATC	6 cut(s)	72, 216, 274, 708, 726, 842
DpnII	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
DrdI	GACNNNNNNGTC	1 cut(s)	305
DseDI	GACNNNNNNGTC	1 cut(s)	305
EaeI	YGGCCR	2 cut(s)	182, 996
EagI	CGGCCG	1 cut(s)	182
Eam1104I	CTCTTC	8 cut(s)	202, 419, 434, 461, 506, 536, 1195, 1200
EarI	CTCTTC	8 cut(s)	202, 419, 434, 461, 506, 536, 1195, 1200
EciI	GGCGGA	2 cut(s)	265, 500
Ecl136II	GAGCTC	2 cut(s)	497, 1653
EclXI	CGGCCG	1 cut(s)	182
Eco130I	CCWWGG	1 cut(s)	1594
Eco24I	GRGCYC	2 cut(s)	499, 1655
Eco31I	GGTCTC	1 cut(s)	533
Eco47I	GGWCC	6 cut(s)	178, 742, 1526, 1591, 1770, 1834
Eco47III	AGCGCT	1 cut(s)	89
Eco52I	CGGCCG	1 cut(s)	182
Eco53kI	GAGCTC	2 cut(s)	497, 1653
Eco57I	CTGAAG	5 cut(s)	1115, 1296, 1323, 1422, 1554
EcoICRI	GAGCTC	2 cut(s)	497, 1653
EcoO109I	RGGNCCY	1 cut(s)	1591
EcoRII	CCWGG	1 cut(s)	591
EcoT14I	CCWWGG	1 cut(s)	1594
EcoT22I	ATGCAT	1 cut(s)	962
EcoT38I	GRGCYC	2 cut(s)	499, 1655
ErhI	CCWWGG	1 cut(s)	1594
FaeI	CATG	3 cut(s)	862, 1199, 1325
FaiI	YATR	7 cut(s)	860, 1068, 1184, 1197, 1323, 1540, 1625
FalI	AAGNNNNNCTT	2 cut(s)	440, 472
FaqI	GGGAC	2 cut(s)	1328, 1783
FatI	CATG	3 cut(s)	858, 1195, 1321
FauI	CCCGC	1 cut(s)	473
FblI	GTMKAC	1 cut(s)	309
Fnu4HI	GCNGC	5 cut(s)	104, 257, 518, 521, 870
FokI	GGATG	8 cut(s)	104, 392, 410, 540, 1004, 1085, 1190, 1303
FriOI	GRGCYC	2 cut(s)	499, 1655
Fsp4HI	GCNGC	5 cut(s)	104, 257, 518, 521, 870
FspBI	CTAG	2 cut(s)	900, 1680
GlaI	GCGC	1 cut(s)	89
GluI	GCNGC	5 cut(s)	104, 257, 518, 521, 870
GsaI	CCCAGC	2 cut(s)	267, 1386
GsuI	CTGGAG	1 cut(s)	575
HaeII	RGCGCY	1 cut(s)	91
HaeIII	GGCC	5 cut(s)	10, 184, 537, 822, 998
HapII	CCGG	6 cut(s)	181, 185, 672, 703, 883, 1811
HhaI	GCGC	1 cut(s)	90
Hin1I	GRCGYC	1 cut(s)	306
Hin1II	CATG	3 cut(s)	862, 1199, 1325
Hin6I	GCGC	1 cut(s)	88
HinP1I	GCGC	1 cut(s)	88
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	1 cut(s)	1866
HpaII	CCGG	6 cut(s)	181, 185, 672, 703, 883, 1811
HphI	GGTGA	4 cut(s)	121, 427, 904, 1603
Hpy166II	GTNNAC	4 cut(s)	25, 310, 742, 1611
Hpy188III	TCNNGA	7 cut(s)	61, 68, 448, 541, 1087, 1117, 1124
Hpy8I	GTNNAC	4 cut(s)	25, 310, 742, 1611
Hpy99I	CGWCG	9 cut(s)	206, 209, 212, 215, 299, 302, 308, 311, 342
HpyAV	CCTTC	6 cut(s)	1090, 1243, 1347, 1369, 1495, 1812
HpyCH4III	ACNGT	5 cut(s)	127, 931, 1171, 1661, 1819
HpyCH4IV	ACGT	1 cut(s)	306
HpyCH4V	TGCA	6 cut(s)	960, 1174, 1220, 1472, 1618, 1746
HpyF10VI	GCNNNNNNNGC	6 cut(s)	256, 327, 514, 720, 819, 1624
HpyF3I	CTNAG	4 cut(s)	362, 847, 1487, 1869
HpySE526I	ACGT	1 cut(s)	306
Hsp92I	GRCGYC	1 cut(s)	306
Hsp92II	CATG	3 cut(s)	862, 1199, 1325
HspAI	GCGC	1 cut(s)	88
Kzo9I	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
LguI	GCTCTTC	1 cut(s)	1200
LmnI	GCTCC	5 cut(s)	264, 513, 664, 674, 1687
Lsp1109I	GCAGC	5 cut(s)	90, 268, 529, 532, 881
LweI	GCATC	7 cut(s)	259, 562, 1047, 1090, 1229, 1481, 1654
MaeI	CTAG	2 cut(s)	900, 1680
MaeII	ACGT	1 cut(s)	306
MaeIII	GTNAC	3 cut(s)	127, 979, 1819
MalI	GATC	6 cut(s)	72, 216, 274, 708, 726, 842
MbiI	CCGCTC	1 cut(s)	244
MboI	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
MflI	RGATCY	1 cut(s)	706
MhlI	GDGCHC	3 cut(s)	499, 948, 1655
MluCI	AATT	9 cut(s)	31, 488, 559, 580, 784, 992, 1107, 1578, 1718
MlyI	GAGTC	4 cut(s)	182, 491, 1129, 1666
MmeI	TCCRAC	4 cut(s)	225, 855, 915, 1553
Mph1103I	ATGCAT	1 cut(s)	962
MseI	TTAA	2 cut(s)	951, 1581
MslI	CAYNNNNRTG	2 cut(s)	1200, 1326
MspA1I	CMGCKG	2 cut(s)	103, 748
MspI	CCGG	6 cut(s)	181, 185, 672, 703, 883, 1811
MspR9I	CCNGG	4 cut(s)	593, 673, 704, 884
Mva1269I	GAATGC	2 cut(s)	1704, 1748
MvaI	CCWGG	1 cut(s)	593
MvnI	CGCG	2 cut(s)	330, 480
MwoI	GCNNNNNNNGC	6 cut(s)	256, 327, 514, 720, 819, 1624
NciI	CCSGG	3 cut(s)	673, 704, 884
NdeII	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
NlaIII	CATG	3 cut(s)	862, 1199, 1325
NlaIV	GGNNCC	7 cut(s)	545, 708, 1303, 1429, 1561, 1771, 1835
NmeAIII	GCCGAG	3 cut(s)	699, 1024, 1182
NmuCI	GTSAC	1 cut(s)	127
NsiI	ATGCAT	1 cut(s)	962
NspI	RCATGY	1 cut(s)	862
NspV	TTCGAA	2 cut(s)	569, 1049
PaqCI	CACCTGC	1 cut(s)	637
PciI	ACATGT	1 cut(s)	858
PciSI	GCTCTTC	1 cut(s)	1200
PcsI	WCGNNNNNNNCGW	5 cut(s)	210, 237, 300, 303, 306
PctI	GAATGC	2 cut(s)	1704, 1748
PfeI	GAWTC	9 cut(s)	64, 571, 640, 689, 895, 1012, 1697, 1753, 1781
PflFI	GACNNNGTC	1 cut(s)	1675
PfoI	TCCNGGA	3 cut(s)	591, 671, 702
PkrI	GCNGC	5 cut(s)	105, 258, 519, 522, 871
Ple19I	CGATCG	2 cut(s)	217, 727
PleI	GAGTC	4 cut(s)	182, 490, 1128, 1666
PpsI	GAGTC	4 cut(s)	182, 490, 1128, 1666
PpuMI	RGGWCCY	1 cut(s)	1591
PscI	ACATGT	1 cut(s)	858
Psp124BI	GAGCTC	2 cut(s)	499, 1655
Psp5II	RGGWCCY	1 cut(s)	1591
Psp6I	CCWGG	1 cut(s)	591
PspFI	CCCAGC	2 cut(s)	263, 1382
PspGI	CCWGG	1 cut(s)	591
PspN4I	GGNNCC	7 cut(s)	545, 708, 1303, 1429, 1561, 1771, 1835
PspPI	GGNCC	8 cut(s)	8, 178, 742, 820, 1526, 1591, 1770, 1834
PspPPI	RGGWCCY	1 cut(s)	1591
PstNI	CAGNNNCTG	1 cut(s)	1520
PsuI	RGATCY	1 cut(s)	706
PsyI	GACNNNGTC	1 cut(s)	1675
PvuI	CGATCG	2 cut(s)	217, 727
RsaI	GTAC	3 cut(s)	797, 923, 1857
RsaNI	GTAC	3 cut(s)	796, 922, 1856
RseI	CAYNNNNRTG	2 cut(s)	1200, 1326
SacI	GAGCTC	2 cut(s)	499, 1655
SalI	GTCGAC	1 cut(s)	308
SapI	GCTCTTC	1 cut(s)	1200
SaqAI	TTAA	2 cut(s)	951, 1581
SatI	GCNGC	5 cut(s)	104, 257, 518, 521, 870
Sau3AI	GATC	6 cut(s)	70, 214, 272, 706, 724, 840
Sau96I	GGNCC	8 cut(s)	8, 178, 742, 820, 1526, 1591, 1770, 1834
ScaI	AGTACT	1 cut(s)	797
SchI	GAGTC	4 cut(s)	182, 491, 1129, 1666
ScrFI	CCNGG	4 cut(s)	593, 673, 704, 884
SduI	GDGCHC	3 cut(s)	499, 948, 1655
SfaNI	GCATC	7 cut(s)	259, 562, 1047, 1090, 1229, 1481, 1654
SfuI	TTCGAA	2 cut(s)	569, 1049
SinI	GGWCC	6 cut(s)	178, 742, 1526, 1591, 1770, 1834
SmiMI	CAYNNNNRTG	2 cut(s)	1200, 1326
SmlI	CTYRAG	4 cut(s)	59, 356, 1085, 1370
SmoI	CTYRAG	4 cut(s)	59, 356, 1085, 1370
Sse9I	AATT	9 cut(s)	31, 488, 559, 580, 784, 992, 1107, 1578, 1718
SspMI	CTAG	2 cut(s)	900, 1680
SstI	GAGCTC	2 cut(s)	499, 1655
StyD4I	CCNGG	4 cut(s)	591, 671, 702, 882
StyI	CCWWGG	1 cut(s)	1594
TaaI	ACNGT	5 cut(s)	127, 931, 1171, 1661, 1819
TaiI	ACGT	1 cut(s)	309
TaqII	GACCGA	1 cut(s)	515
TasI	AATT	9 cut(s)	31, 488, 559, 580, 784, 992, 1107, 1578, 1718
TatI	WGTACW	2 cut(s)	795, 921
TfiI	GAWTC	9 cut(s)	64, 571, 640, 689, 895, 1012, 1697, 1753, 1781
Tru1I	TTAA	2 cut(s)	951, 1581
Tru9I	TTAA	2 cut(s)	951, 1581
TscAI	CASTG	2 cut(s)	934, 1666
TseFI	GTSAC	1 cut(s)	127
TseI	GCWGC	5 cut(s)	103, 256, 517, 520, 869
Tsp45I	GTSAC	1 cut(s)	127
TspRI	CASTG	2 cut(s)	934, 1666
Tth111I	GACNNNGTC	1 cut(s)	1675
VpaK11BI	GGWCC	6 cut(s)	178, 742, 1526, 1591, 1770, 1834
XapI	RAATTY	1 cut(s)	1107
XceI	RCATGY	1 cut(s)	862
XmiI	GTMKAC	1 cut(s)	309
XspI	CTAG	2 cut(s)	900, 1680
ZraI	GACGTC	1 cut(s)	307
ZrmI	AGTACT	1 cut(s)	797
Zsp2I	ATGCAT	1 cut(s)	962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.