Rorug02G0574600
MYB Family

Protein of unknown function (DUF971)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
69982059 .. 69994433
12375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0574600.1

Sequence Viewer

Length: 5040 bp
ATGGGGCAAGTGCCTGGCAGTAGTACAGTACCAGATAAGAAGCCCTTTGTGCCAATTATACCTATAACAAGAACTTCTGAAAGAGATTATGGTGCAACTCACAATAATCAGCTCAACTATACTCCTCCCAATGACATATCTATACCATCCTCCAGAAAACCAAAAGCAAAGAGAAAAGCTAGTGATGGCGTTACTTCCTCAGTTGGGTCAGATCCCGTTGCAAGTCAAGAAGCCACTATTGGATGCTTCTGTGAGTTGGTGGAGGATTTTTGCGGCAGAGCTGAAATTTTCAGTGAGGATCGGGACGAAGCACAGTGGTTATCTATGCCTCTTTCTGATCTTAGAATGCTTGCAAATGAAATAATGTCTCTTCGTGCAAAGAGGCTTCTACATATGGTTCCTGTAGATACTTTTGTTAGATTGTTAAGGATTTTAGATCATCAGATACATGGAGCTGAAGGCTTGTCTATAAATGAACAGTCAGATTCAAATGGGGTTTCATCAATCAATTGTGCACTAGAGTCCATTCATGCAGCTTTAGCAGTAATGGCCCATAACCAGATGCCAAAGCAGCTGTATAAAGAAGAGATCATTGAAAGAATTCTGGAGTTCTCCAGGCATCAGATAATGGATGTTATGTGTGCTTGCGATCCATCATATCGTGCTTTACATAGGCCAAGTGAAAATGGGACACTTGAAGTTGAGGAAGACGAAATTCTTGATGCTGAAACTGGTTCAGCAAGCAAGAGGCGACGTAGTACTAAGACTGTTAAAGTGCAGAAATCATCATATAACAGGGTCTCTGCTGCTGTGAATAATATTCTTCAGAAAATGTGCACAATTCTTGGTTTGCTAAAGGATTTGTTGCTGATAGAAAAGTTGTCAGATAGTTGTATCTTACAACTACTGAAAACAAGCTTTACAACATTTATGGTGGATAATATCCAGCTTTTGCAACTGAAGGCAATTGGTTTGATCAGTGGGATATACTATTCATACACTCAACATCGGACTTATGTTATAGATGAGTTACTTCAGCTGCTTTGGAAGTTGCCTTTCTCGAAGCGAGCTTTGAGAGCCTATCACCTACCCGATGAAGAGCAAACGCAGATTCAAATGATCACTGCTTTGCTGATTCAGTTGGTTCACTGTAGTGCAAACCTTCCTGCACCTTTAAGGCAGGATTCAAGTGTTAATTCCATCTTAGAAGTTTCTGACAATGCTGATTATCCAATTAAAGGCCTTGAGGCAGCACAAGCAGCATGTTGTCACTTTTGGAAAGGGGTACTTCAGCGGTTTGCTAATGTCAAGAACCAGGAAGCTTCAGAATTCAAAGTTATGATGGAGAATCTTGTTACTGATCTGCTGACAACATTGAATTTACCTGAATATCCCGCTTCAGCCCCTATTCTGGAGGTTCTTTGTGTCTTGTTACTCGCGAATGCTGGGGTGAAATCTAAAGATGTAGCTGCACGTAGCATGGCTATCGACCTTCTTGGAACCATTGCTGCGAGGTTGAAGCGTGATTCTCTCCTTCGCAGTAGAGGCAAATTTTGGATATTACAGGAGTTGGTTAGTGGGGATGCGGCTGATCAGACTTATCCAAAAGATGTATGCTCTGCTTGTTTAGATGGCAGGGTTGAAAAGACTTTCTTTGTATGTCAAGGTTGTCAGAGAATGTTTCACGCAGATTGCATGGGAGTAAGAGAGCATGAAGTTCCTAACCAATCTTGGCACTGTCAGATATGCCTCTGCCGGAAACAACTTCTTGTTTTACAATCTTACTGCAAGTCACAATACAAAGATGATGGATTTAAGGATCAGAAAAGTTCAGGAAGAAAAACTGAAGTTACTTTTTCAATTACTAAACTTGAGATCGTCCAACAGTTGCTTTTGAATTACCTACAAGATACCGCATCAGCTGATGATGTTCATCTCTTTGTTCGTTGGCTTTATGTCTGCTTGTGGTACAAGGATGATCCACCAAAGTCCCAGCAGAAGTTCATTTACTATCTTGCAAGACTGAACTCAAAAGCAATAGTGCGGGATTCTGGGACTGTTTTTTCCTTGCTGACAAGGGACTTAATCAAGCAGATTACCTTAGTATTGGGACGAAATACTTCTTTTGCCAGAGGATTTGATAAGATTCTACACCTGCTTCTGGCAAGTCTAAGGGAGAATTCTCCTGTAATCAGGGCCAAGGCTTTACGAGCGGTTAGTATAGTTGTAGAGGCTGATCCGGAGGTTTTAGGTGACAAACGTGTGCAACCAGCTGTTGAAGGAAGGTTTTGTGATTCCGCAATTTCTGTTAGAGAAGCAGCACTGGAACTCGTAGGGAGGCATATTGCTTCCCATCCTGATGTTGGTTTGAAGTATTTTGAGAAGGTTGCTGAGAGAATCAAAGATACGGGTGTGAGTGTTCGAAAGCGATCTATTAGAATCATACGAGATATGTGCGTTTCAAATGGGGACTTCTCTGAATTTACTAGTGCTTGCATTGCTATCATCTCCCGTATTGGTGATGACGAATCAAGTATACAGGATCTTGTTTGCAAGACATTTTATGAGTTCTGGTTTGAGGAACATACTGGTTCACATACTCAATTCTTTGGAGATGATAGCTCTGTTCCATTGGAGGTGGCTAAAAAAACTGAACAGATTGTTGAGATGTTGAGGAGGATGCCAACACCACACCATCTTGTTACCGTCATTAAACGCAACTTAGCCCTTGATTTTTTCCCACAAGCAGCTAAAGCTGCGGGAATCAATCCCGTCTTACTTGCATCAGTACGCAATCGGTGTGAGCTAATGTGCAAGTTTTTACTGGAAAGGATATTGCAGGTAGAAGAAATGAATATCCAGGAAGTTGAGATGCGTGCACTTCCATATGTGCAAGTTCTGCATGCATTTTGTGTTGTGGATCCAACATTATGTGCACCGGTTTCTAACCCTTCACAGTTTGTGGTCACTCTTCAGCCTTATCTAAAGAGTCAGGATGATAATCGAGTGGTTGCCAAGTTATTGGAGAGCATAATATTCATAATTGATTCTGTCCTCCCTTTAGTAAGAAAGTTGCCACAAAATGTTCTTGAAGAACTTGAACAAGACTTAAAGAGCATGATTGTTCGGCATTCCTTCTTGACAGTTGTTCATGCTTGCATCAAGTGCCTCTGTGCTGTGAGTAAAGTGGCAGGAAAAGGCGCTGCTGTTGTGGAGTATCTAATTCAGGTTTTTTACAAACGGCTGGATGCTGAGGAAGTTGACAACCAGCAGAAAGCGGGGCGATCTCTTTTCTGTCTTGGAATGCTTATCCGTTATGGCAACTCTTTACTGTGTTACTCTGACCAAACAATTGATGTTGCAAGCAGTCTCGGCTTATTTAAAAGATATCTTCTAATGGACGATTTTTTCTTAAAGGCTAGATCATTGCAGGCATTGGGCTTTGTGTTAATTGCTAGGCCTGAATTTATGTTGGAAAAAGATATTGGGAAGATATTAGAGGAGACATTCTCTTCTAGCTCTGATGTCCGTCTCAAGATGCAAGCTTTGCAAAACATGTACGACTATCTTCTTGATGCTGAAACTCAATTGGGAACGGATACAACCAGTAATAATGTGGCTGATTATTCTGTGGAGGGTGGCAATGCTGTACCTGTTGCTGCGGGTGCTGGAGATACTAATATATGTGGCGGAATAGTTCAGTTGTATTGGGATAATATTCTGGAGAGATGTTTGGACTTTAATGAACAAATTCGCAGCTCTGCCCTTAAGATTGTTGAAGTTGTGCTGCGCCAAGGGCTTGTGCATCCTATTACTTGTGTTCCATTCCTTATTGCACTGGAAACAGATCCACTGGAGGCCAATTCGACATTAGCGCATCATTTGCTGATGAATATGAATGAAAAGTACCCTTCATTTTTTGAAAGCCGACTAGGGGATGGCCTTCAAATGTCTTTTGGATTTATACAATCCATACGTCCTGGTACTGAACGTGAGAACACAAAACCACCATCAAAGGCTTCTGGAAATGCAAAGGGAAAAGTTGATGATGTTTCTTTTGCTCAAGCAAGATTGGGAGTCTCTCGAATCTACAAGCTTATTCGTGCTAACCGTGTTTCAAGGAACAAATTTATGTCCTCAATTGTTCGCAAGTTTGATAATCCTAGCTGGACCACTTCAGTAGTCCCTTTCCTCATGTACTGCACGGAAATACTTGCCTTGCTGCCATTCACAACACCTGATGAGCCCCTTTATTTAGTCTATGCTATAAATAGAGTAATACAAGTTAAGGCTGGGCAACTTGAAGCAAAGCTGAAAGCTCTGACATTGCATCTGTTACAAAGAGGTGCACCCCGTGGGAATGGCGTAATTAAAGAGGACCCAGCTGCTCCGCCCTTTACAAGAGGAATGGCATCAGTGGATTTGAATGGGACAATTGAACCCGAACCAGCTTATTACATGGCAGCTATGGATTTGAATGGGACGATTGAACAAGACCCAGCTGATCAGTCTGTCTCAAATCAAGATACCGTGTTAGAGGCAAAGATGCACGGTAAAGGTTCTATCAGTTCCTCTGGCATCTCAATAGATGATGTACAGATAATCCAGGCAGACTGCCTGGCAGCTATTGCATTGCAGCTTCTTTTGAAACTGAAGAGACACCTAAAAATTGTGTATAGCTTGAATGATGCTAGGTGCCAGGCTTTCTCTCCAACCGATCCCATTAAACCTGGAGATGCTTTCTCCAAGCAGAGCATTCCTTTTGACGTCAGTGACACACATACTAACTTGCCTGGAACTTATCAAGAATTGGTACAAAGATATCAGGAATTCAAGAATGCGTTGAAGGATGATACAGTTGATTTCTCAACTTACACAGCAAATCTCAAAAGAAAACGTCCGGCCCCTAGGAAAGGAAGGAAATCTGGAGTTAGAGATGACGAGGATGACAATGATGATGATGAAGATTGGTCAGGTGGGGCTCGGAGGCTGAGTTATAGTGGGAGGAGAGGTGGCCACAGTAGAAGTCGACAACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1679

Amino Acids

187.88

Weight (kDa)

6.67

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cohesin_HEAT PF12765 737 - 778 1.1e-12 HEAT repeat associated with sister chromatid cohesion
Nipped-B_C PF12830 1229 - 1426 1.1e-51 Sister chromatid cohesion C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2163
AatII GACGTC 1 cut(s) 4770
Acc36I ACCTGC 2 cut(s) 2163, 2830
AccB1I GGYRCC 1 cut(s) 4695
AccBSI CCGCTC 1 cut(s) 2213
AccI GTMKAC 2 cut(s) 2536, 5029
AccII CGCG 1 cut(s) 1439
AccIII TCCGGA 1 cut(s) 2239
AcoI YGGCCR 1 cut(s) 5014
AcyI GRCGYC 1 cut(s) 4767
AdeI CACNNNGTG 1 cut(s) 4355
AfiI CCNNNNNNNGG 7 cut(s) 204, 1238, 1411, 2161, 2363, 3934, 4913
AflII CTTAAG 1 cut(s) 3767
AflIII ACRYGT 2 cut(s) 2260, 3555
AgeI ACCGGT 1 cut(s) 2938
AhlI ACTAGT 1 cut(s) 2486
AjuI GAANNNNNNNTTGG 4 cut(s) 222, 254, 3468, 3500
AleI CACNNNNGTG 1 cut(s) 1152
Alw21I GWGCWC 5 cut(s) 517, 839, 2881, 2938, 4351
Alw26I GTCTC 8 cut(s) 372, 805, 3374, 3497, 3536, 4084, 4519, 4651
Alw44I GTGCAC 5 cut(s) 513, 835, 2877, 2934, 4347
Aor13HI TCCGGA 1 cut(s) 2239
AoxI GGCC 9 cut(s) 549, 674, 1240, 2196, 3458, 3858, 3940, 4902, 5014
ApaLI GTGCAC 5 cut(s) 513, 835, 2877, 2934, 4347
AsiGI ACCGGT 1 cut(s) 2938
Asp700I GAANNNNTTC 3 cut(s) 600, 2119, 3750
AspA2I CCTAGG 1 cut(s) 4907
AspLEI GCGC 3 cut(s) 3203, 3792, 3877
AspS9I GGNCC 5 cut(s) 550, 2196, 4170, 4378, 4903
AsuHPI GGTGA 4 cut(s) 1076, 1462, 2264, 2531
AsuII TTCGAA 1 cut(s) 2422
AvaII GGWCC 2 cut(s) 4170, 4378
AvrII CCTAGG 1 cut(s) 4907
BaeGI GKGCMC 5 cut(s) 517, 839, 2881, 2938, 4351
BaeI ACNNNNGTAYC 4 cut(s) 399, 432, 2397, 2430
BalI TGGCCA 1 cut(s) 5016
BamHI GGATCC 1 cut(s) 2920
BanI GGYRCC 1 cut(s) 4695
BanII GRGCYC 2 cut(s) 4248, 4984
BarI GAAGNNNNNNTAC 2 cut(s) 1991, 2023
BbsI GAAGAC 1 cut(s) 714
Bbv12I GWGCWC 5 cut(s) 517, 839, 2881, 2938, 4351
BbvCI CCTCAGC 1 cut(s) 3252
BceAI ACGGC 1 cut(s) 3257
BcgI CGANNNNNNTGC 4 cut(s) 1468, 1502, 2436, 2470
BciVI GTATCC 1 cut(s) 3592
BclI TGATCA 4 cut(s) 975, 1119, 1591, 4504
BcoDI GTCTC 8 cut(s) 372, 805, 3374, 3497, 3536, 4084, 4519, 4651
BcuI ACTAGT 1 cut(s) 2486
BfmI CTRYAG 2 cut(s) 402, 1150
BfoI RGCGCY 1 cut(s) 3204
BfrI CTTAAG 1 cut(s) 3767
BfuAI ACCTGC 2 cut(s) 2163, 2830
BfuI GTATCC 1 cut(s) 3592
BlnI CCTAGG 1 cut(s) 4907
BmcAI AGTACT 1 cut(s) 760
Bme18I GGWCC 2 cut(s) 4170, 4378
BmgT120I GGNCC 5 cut(s) 550, 2196, 4170, 4378, 4903
BmiI GGNNCC 6 cut(s) 399, 1501, 2922, 4380, 4697, 4905
BpiI GAAGAC 1 cut(s) 714
BplI GAGNNNNNCTC 2 cut(s) 3494, 3526
BpmI CTGGAG 9 cut(s) 136, 598, 626, 1433, 3690, 3743, 3875, 4752, 4947
Bpu10I CCTNAGC 1 cut(s) 3252
Bpu14I TTCGAA 1 cut(s) 2422
BpuEI CTTGAG 4 cut(s) 1265, 1892, 3518, 4047
BsaAI YACGTR 1 cut(s) 1475
BsaBI GATNNNNATC 2 cut(s) 1932, 3000
BsaHI GRCGYC 1 cut(s) 4767
BsaI GGTCTC 1 cut(s) 805
BsaJI CCNNGG 4 cut(s) 2199, 3793, 4354, 4907
BsaWI WCCGGW 2 cut(s) 2239, 2938
BsaXI ACNNNNNCTCC 4 cut(s) 4978, 4996, 5008, 5026
Bsc4I CCNNNNNNNGG 7 cut(s) 204, 1238, 1411, 2161, 2363, 3934, 4913
Bse118I RCCGGY 1 cut(s) 2938
Bse1I ACTGG 7 cut(s) 736, 2328, 2593, 2829, 3606, 3843, 3858
Bse3DI GCAATG 6 cut(s) 1503, 2496, 3425, 3649, 4325, 4631
Bse8I GATNNNNATC 2 cut(s) 1932, 3000
BseAI TCCGGA 1 cut(s) 2239
BseDI CCNNGG 4 cut(s) 2199, 3793, 4354, 4907
BseJI GATNNNNATC 2 cut(s) 1932, 3000
BseLI CCNNNNNNNGG 7 cut(s) 204, 1238, 1411, 2161, 2363, 3934, 4913
BseMI GCAATG 6 cut(s) 1503, 2496, 3425, 3649, 4325, 4631
BseMII CTCAG 4 cut(s) 213, 2382, 3243, 4982
BseNI ACTGG 7 cut(s) 736, 2328, 2593, 2829, 3606, 3843, 3858
BseRI GAGGAG 4 cut(s) 114, 2689, 3515, 5020
BseSI GKGCMC 5 cut(s) 517, 839, 2881, 2938, 4351
BseYI CCCAGC 5 cut(s) 1445, 1992, 4292, 4381, 4498
BsgI GTGCAG 4 cut(s) 797, 1152, 1455, 4186
Bsh1236I CGCG 1 cut(s) 1439
BshFI GGCC 9 cut(s) 551, 676, 1242, 2198, 3460, 3860, 3942, 4904, 5016
BshNI GGYRCC 1 cut(s) 4695
BshTI ACCGGT 1 cut(s) 2938
BsiHKAI GWGCWC 5 cut(s) 517, 839, 2881, 2938, 4351
BsiSI CCGG 4 cut(s) 1756, 2240, 2939, 4901
BslI CCNNNNNNNGG 7 cut(s) 204, 1238, 1411, 2161, 2363, 3934, 4913
BsmAI GTCTC 8 cut(s) 372, 805, 3374, 3497, 3536, 4084, 4519, 4651
BsmBI CGTCTC 1 cut(s) 3536
BsmI GAATGC 6 cut(s) 351, 1447, 3130, 3309, 4755, 4843
BsnI GGCC 9 cut(s) 551, 676, 1242, 2198, 3460, 3860, 3942, 4904, 5016
Bso31I GGTCTC 1 cut(s) 805
Bsp119I TTCGAA 1 cut(s) 2422
Bsp1286I GDGCHC 7 cut(s) 517, 839, 2881, 2938, 4248, 4351, 4984
Bsp13I TCCGGA 1 cut(s) 2239
Bsp1407I TGTACA 1 cut(s) 4594
Bsp68I TCGCGA 1 cut(s) 1439
BspANI GGCC 9 cut(s) 551, 676, 1242, 2198, 3460, 3860, 3942, 4904, 5016
BspCNI CTCAG 4 cut(s) 212, 2383, 3244, 4983
BspEI TCCGGA 1 cut(s) 2239
BspFNI CGCG 1 cut(s) 1439
BspLI GGNNCC 6 cut(s) 399, 1501, 2922, 4380, 4697, 4905
BspMI ACCTGC 2 cut(s) 2163, 2830
BspQI GCTCTTC 1 cut(s) 1092
BspT104I TTCGAA 1 cut(s) 2422
BspT107I GGYRCC 1 cut(s) 4695
BspTI CTTAAG 1 cut(s) 3767
BspTNI GGTCTC 1 cut(s) 805
BsrBI CCGCTC 1 cut(s) 2213
BsrDI GCAATG 6 cut(s) 1503, 2496, 3425, 3649, 4325, 4631
BsrFI RCCGGY 1 cut(s) 2938
BsrGI TGTACA 1 cut(s) 4594
BsrI ACTGG 7 cut(s) 736, 2328, 2593, 2829, 3606, 3843, 3858
BssAI RCCGGY 1 cut(s) 2938
BssECI CCNNGG 4 cut(s) 2199, 3793, 4354, 4907
BssNAI GTATAC 1 cut(s) 2537
BssNI GRCGYC 1 cut(s) 4767
BssT1I CCWWGG 3 cut(s) 2199, 3793, 4907
Bst1107I GTATAC 1 cut(s) 2537
Bst6I CTCTTC 6 cut(s) 375, 579, 1092, 2976, 3517, 4649
BstACI GRCGYC 1 cut(s) 4767
BstAFI CTTAAG 1 cut(s) 3767
BstAPI GCANNNNNTGC 5 cut(s) 2899, 3165, 3547, 3883, 4628
BstAUI TGTACA 1 cut(s) 4594
BstBAI YACGTR 1 cut(s) 1475
BstBI TTCGAA 1 cut(s) 2422
BstDSI CCRYGG 1 cut(s) 4354
BstENI CCTNNNNNAGG 1 cut(s) 4911
BstFNI CGCG 1 cut(s) 1439
BstH2I RGCGCY 1 cut(s) 3204
BstHHI GCGC 3 cut(s) 3203, 3792, 3877
BstMAI GTCTC 8 cut(s) 372, 805, 3374, 3497, 3536, 4084, 4519, 4651
BstNSI RCATGY 3 cut(s) 1266, 2906, 3559
BstSFI CTRYAG 2 cut(s) 402, 1150
BstSLI GKGCMC 5 cut(s) 517, 839, 2881, 2938, 4351
BstUI CGCG 1 cut(s) 1439
BstV2I GAAGAC 1 cut(s) 714
BstX2I RGATCY 4 cut(s) 211, 2542, 2920, 3847
BstXI CCANNNNNNTGG 1 cut(s) 3022
BstYI RGATCY 4 cut(s) 211, 2542, 2920, 3847
BstZ17I GTATAC 1 cut(s) 2537
BsuI GTATCC 1 cut(s) 3592
BsuRI GGCC 9 cut(s) 551, 676, 1242, 2198, 3460, 3860, 3942, 4904, 5016
BtgI CCRYGG 1 cut(s) 4354
BtsI GCAGTG 1 cut(s) 1122
BtuMI TCGCGA 1 cut(s) 1439
BveI ACCTGC 2 cut(s) 2163, 2830
CfoI GCGC 3 cut(s) 3203, 3792, 3877
Cfr10I RCCGGY 1 cut(s) 2938
Cfr13I GGNCC 5 cut(s) 550, 2196, 4170, 4378, 4903
CspAI ACCGGT 1 cut(s) 2938
DraI TTTAAA 1 cut(s) 3382
DraIII CACNNNGTG 1 cut(s) 4355
EaeI YGGCCR 1 cut(s) 5014
Eam1104I CTCTTC 6 cut(s) 375, 579, 1092, 2976, 3517, 4649
EarI CTCTTC 6 cut(s) 375, 579, 1092, 2976, 3517, 4649
EciI GGCGGA 2 cut(s) 3705, 4380
Eco130I CCWWGG 3 cut(s) 2199, 3793, 4907
Eco147I AGGCCT 2 cut(s) 1242, 3460
Eco24I GRGCYC 2 cut(s) 4248, 4984
Eco31I GGTCTC 1 cut(s) 805
Eco32I GATATC 2 cut(s) 3389, 4823
Eco47I GGWCC 2 cut(s) 4170, 4378
EcoNI CCTNNNNNAGG 1 cut(s) 4911
EcoO109I RGGNCCY 1 cut(s) 4378
EcoRI GAATTC 4 cut(s) 600, 1328, 2179, 4829
EcoRV GATATC 2 cut(s) 3389, 4823
EcoT14I CCWWGG 3 cut(s) 2199, 3793, 4907
EcoT22I ATGCAT 1 cut(s) 2908
EcoT38I GRGCYC 2 cut(s) 4248, 4984
ErhI CCWWGG 3 cut(s) 2199, 3793, 4907
Esp3I CGTCTC 1 cut(s) 3536
FalI AAGNNNNNCTT 6 cut(s) 29, 61, 1272, 1304, 1637, 1669
FauI CCCGC 5 cut(s) 1402, 2037, 2752, 3271, 3655
FauNDI CATATG 2 cut(s) 393, 2887
FbaI TGATCA 4 cut(s) 975, 1119, 1591, 4504
FblI GTMKAC 2 cut(s) 2536, 5029
FriOI GRGCYC 2 cut(s) 4248, 4984
GlaI GCGC 3 cut(s) 3202, 3791, 3876
GsaI CCCAGC 5 cut(s) 1449, 1996, 4296, 4385, 4502
GsuI CTGGAG 9 cut(s) 136, 598, 626, 1433, 3690, 3743, 3875, 4752, 4947
HaeII RGCGCY 1 cut(s) 3204
HaeIII GGCC 9 cut(s) 551, 676, 1242, 2198, 3460, 3860, 3942, 4904, 5016
HapII CCGG 4 cut(s) 1756, 2240, 2939, 4901
HhaI GCGC 3 cut(s) 3203, 3792, 3877
Hin1I GRCGYC 1 cut(s) 4767
Hin6I GCGC 3 cut(s) 3201, 3790, 3875
HinP1I GCGC 3 cut(s) 3201, 3790, 3875
HincII GTYRAC 2 cut(s) 3262, 5030
HindII GTYRAC 2 cut(s) 3262, 5030
HindIII AAGCTT 4 cut(s) 916, 1320, 3543, 4094
HpaII CCGG 4 cut(s) 1756, 2240, 2939, 4901
HphI GGTGA 4 cut(s) 1076, 1462, 2264, 2531
Hpy99I CGWCG 1 cut(s) 756
HpyCH4IV ACGT 7 cut(s) 754, 1474, 2260, 3976, 3991, 4767, 4897
HpySE526I ACGT 7 cut(s) 754, 1474, 2260, 3976, 3991, 4767, 4897
Hsp92I GRCGYC 1 cut(s) 4767
HspAI GCGC 3 cut(s) 3201, 3790, 3875
Kpn2I TCCGGA 1 cut(s) 2239
Ksp22I TGATCA 4 cut(s) 975, 1119, 1591, 4504
LguI GCTCTTC 1 cut(s) 1092
LmnI GCTCC 2 cut(s) 452, 4393
MaeII ACGT 7 cut(s) 754, 1474, 2260, 3976, 3991, 4767, 4897
MbiI CCGCTC 1 cut(s) 2213
MfeI CAATTG 6 cut(s) 508, 966, 3351, 3587, 4140, 4434
MflI RGATCY 4 cut(s) 211, 2542, 2920, 3847
MhlI GDGCHC 7 cut(s) 517, 839, 2881, 2938, 4248, 4351, 4984
MlsI TGGCCA 1 cut(s) 5016
MluNI TGGCCA 1 cut(s) 5016
MlyI GAGTC 3 cut(s) 530, 2998, 4086
MmeI TCCRAC 4 cut(s) 1906, 2948, 3453, 4736
Mox20I TGGCCA 1 cut(s) 5016
Mph1103I ATGCAT 1 cut(s) 2908
MroI TCCGGA 1 cut(s) 2239
MroXI GAANNNNTTC 3 cut(s) 600, 2119, 3750
MscI TGGCCA 1 cut(s) 5016
MslI CAYNNNNRTG 2 cut(s) 1152, 2358
Msp20I TGGCCA 1 cut(s) 5016
MspA1I CMGCKG 7 cut(s) 574, 1039, 1294, 1922, 2273, 4385, 4502
MspCI CTTAAG 1 cut(s) 3767
MspI CCGG 4 cut(s) 1756, 2240, 2939, 4901
MunI CAATTG 6 cut(s) 508, 966, 3351, 3587, 4140, 4434
Mva1269I GAATGC 6 cut(s) 351, 1447, 3130, 3309, 4755, 4843
MvnI CGCG 1 cut(s) 1439
NdeI CATATG 2 cut(s) 393, 2887
NlaIV GGNNCC 6 cut(s) 399, 1501, 2922, 4380, 4697, 4905
NmeAIII GCCGAG 1 cut(s) 3351
NmuCI GTSAC 5 cut(s) 1268, 1791, 2252, 2965, 4772
NruI TCGCGA 1 cut(s) 1439
NsiI ATGCAT 1 cut(s) 2908
NspI RCATGY 3 cut(s) 1266, 2906, 3559
NspV TTCGAA 1 cut(s) 2422
OliI CACNNNNGTG 1 cut(s) 1152
PaeI GCATGC 1 cut(s) 2906
PaqCI CACCTGC 1 cut(s) 2163
PceI AGGCCT 2 cut(s) 1242, 3460
PciI ACATGT 1 cut(s) 3555
PciSI GCTCTTC 1 cut(s) 1092
PcsI WCGNNNNNNNCGW 1 cut(s) 4108
PctI GAATGC 6 cut(s) 351, 1447, 3130, 3309, 4755, 4843
PdmI GAANNNNTTC 3 cut(s) 600, 2119, 3750
PfoI TCCNGGA 1 cut(s) 2859
PinAI ACCGGT 1 cut(s) 2938
PleI GAGTC 3 cut(s) 529, 2997, 4085
PpsI GAGTC 3 cut(s) 529, 2997, 4085
Ppu21I YACGTR 1 cut(s) 1475
PpuMI RGGWCCY 1 cut(s) 4378
PscI ACATGT 1 cut(s) 3555
Psp5II RGGWCCY 1 cut(s) 4378
PspFI CCCAGC 5 cut(s) 1445, 1992, 4292, 4381, 4498
PspN4I GGNNCC 6 cut(s) 399, 1501, 2922, 4380, 4697, 4905
PspPI GGNCC 5 cut(s) 550, 2196, 4170, 4378, 4903
PspPPI RGGWCCY 1 cut(s) 4378
PsuI RGATCY 4 cut(s) 211, 2542, 2920, 3847
PvuII CAGCTG 6 cut(s) 574, 1039, 1922, 2273, 4385, 4502
RruI TCGCGA 1 cut(s) 1439
RseI CAYNNNNRTG 2 cut(s) 1152, 2358
SalI GTCGAC 1 cut(s) 5028
SapI GCTCTTC 1 cut(s) 1092
Sau96I GGNCC 5 cut(s) 550, 2196, 4170, 4378, 4903
ScaI AGTACT 1 cut(s) 760
SchI GAGTC 3 cut(s) 530, 2998, 4086
SduI GDGCHC 7 cut(s) 517, 839, 2881, 2938, 4248, 4351, 4984
SfcI CTRYAG 2 cut(s) 402, 1150
SfuI TTCGAA 1 cut(s) 2422
SinI GGWCC 2 cut(s) 4170, 4378
SmiMI CAYNNNNRTG 2 cut(s) 1152, 2358
SmlI CTYRAG 5 cut(s) 1244, 1871, 3533, 3767, 4062
SmoI CTYRAG 5 cut(s) 1244, 1871, 3533, 3767, 4062
SpeI ACTAGT 1 cut(s) 2486
SphI GCATGC 1 cut(s) 2906
SseBI AGGCCT 2 cut(s) 1242, 3460
SspI AATATT 3 cut(s) 820, 3036, 3718
StuI AGGCCT 2 cut(s) 1242, 3460
StyI CCWWGG 3 cut(s) 2199, 3793, 4907
TaiI ACGT 7 cut(s) 757, 1477, 2263, 3979, 3994, 4770, 4900
TaqI TCGA 7 cut(s) 1061, 1488, 2422, 3004, 3866, 4084, 5029
TatI WGTACW 4 cut(s) 23, 758, 4197, 4594
TauI GCSGC 2 cut(s) 276, 1589
TseFI GTSAC 5 cut(s) 1268, 1791, 2252, 2965, 4772
Tsp45I GTSAC 5 cut(s) 1268, 1791, 2252, 2965, 4772
TspGWI ACGGA 4 cut(s) 3302, 3518, 3611, 4220
Vha464I CTTAAG 1 cut(s) 3767
VneI GTGCAC 5 cut(s) 513, 835, 2877, 2934, 4347
VpaK11BI GGWCC 2 cut(s) 4170, 4378
XagI CCTNNNNNAGG 1 cut(s) 4911
XceI RCATGY 3 cut(s) 1266, 2906, 3559
XcmI CCANNNNNNNNNTGG 2 cut(s) 2360, 3613
XmaJI CCTAGG 1 cut(s) 4907
XmiI GTMKAC 2 cut(s) 2536, 5029
XmnI GAANNNNTTC 3 cut(s) 600, 2119, 3750
ZraI GACGTC 1 cut(s) 4768
ZrmI AGTACT 1 cut(s) 760
Zsp2I ATGCAT 1 cut(s) 2908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.