Rorug03G0072800

Universal stress protein family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0015068
Physical Location & Seq
Reverse (-)
5781450 .. 5785358
3909 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0072800.1

Sequence Viewer

Length: 1605 bp
ATGTCGTTGAGGCCGAACGCGAGGGCTGAGGTCCGCCGCAACAGGTACAAGGTGGCGGTGGACGCGGAGGAGGGGCGGCGGCGCAGGGAGGACAATATGGTGGAGATCAGGAAGAATCGCAGAGAAGAGAGCCTCCAGAAGAAGCGCCGCGAGGGGTTTCAGCCGCAGCAATTGCCGGCTAATCTTCAGTCGCCGGCGCTGGAGAAGAAGCTAGAGCACTTACCGTCCATGGTTGCTGGTGTTTGGAGTGAAGAGGGCACTCTGCAGCTCGAGGCAACTACTCAGTTTAGGAAGTTGCTATCAATTGAGCGCAGCCCTCCAATTGAGGAAGTTATTCAATCTGGTGTTGTTCCTCGCTTTGTGGAGTTTCTAATGAAGGAGAACTTTCATCAACTTCAGTTCGAGGCAGCTTGGGCTCTCACAAACATTGCGTCTGGGACGTCTGAGAACACAAAGGTGGTTATTGAACATGGTGCTGTTCCTATCTTTGTCAAATTACTGAGTTCTCCAAGTGATGATGTTCGTGAGCAGGCTGTTTGGGCGTTGGGAAATGTTGCTGGTGATTCCCCAAAATGCCGGGATCTGGTACTTGGCAGTGGAGCTCTGATTCCATTGTTATCGCAGTTGAATGAGCATGCAAAGCTCTCTATGTTGAGAAATGCTACTTGGACATTGTCAAACTTTTGCAGGGGAAAGCCACAGCCTCCTTTTGATGAGGTTAAGCCAGCACTTCCAGCTCTAGCTCGTCTGATTCACTCAAATGATGAAGAAGTCTTGACTGATGCGTGTTGGGCTCTTTCATACCTTTCCGATGGTACTAATGACAAAATTCAAGCCGTTATTGAGTCCGGAGTATGCCCCAGGCTTGTTGAACTTCTGCTCCATCCATCTCCATCCGTACTCATCCCTGCTCTCCGCACAGTCGGAAATATTGTTACTGGTGATGATATGCAAACTCAGGTGATCATCCAACATCAAGCTCTTCCTTGTCTGCTGACCCTTCTGACCAACAATTTTAAAAAGAGCATCAAGAAGGAAGCTTGCTGGACAATTTCAAATATCACAGCTGGAAACAAAGAGCAGATTCAGGCTGTAGTCGACGCTAATATAATTGGTCCACTCGTTCAACTGCTTTCAACTGCTGAGTTTGATATAAAGAAAGAAGCTGCATGGGCAGTATCAAATGCGACATCTGGTGGTTCTCATGATCAAATAAAAATTCTTGTAAATCATGGGTGTATCAAGCCATTGTGTGATCTTCTTATCTGCCCCGATCCAAGAATTGTTACAGTTTGTTTAGAAGGCCTGGAGAACATCTTGAAGGTTGGAGAAGCTGAGAAGAATTTGGGCACGACAGGAGGTGTAAATCCCTATGCTCAGTCAATTGATGATGCTGAGGGGTTAGAGAAGATTGAGAATCTACAGACTCATGACAATACTGAAATTTATGAGAAGGCAGTTAAGCTTCTTGAGACATATTGGTTGGAGGACGATGACGGTGATGAAACAATGCCACCAGGTGACGTTCCAACTGTTCCTGCTGGTGGTTTCAACTTCGGAGGAAATGGTCCAAGTGTTCCATCTGGTGGATTCAACTTCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Usp

Protein Analysis

534

Amino Acids

58.66

Weight (kDa)

5.25

Isoelectric Point (pI)

50.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBB PF01749 12 - 94 7.8e-22 Importin beta binding domain
Arm PF00514 105 - 145 8.9e-10 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 108 - 230 3.8e-06 ARMC5
HEAT_EZ PF13513 131 - 185 1.1e-09 HEAT-like repeat
Arm PF00514 147 - 186 1.9e-13 Armadillo/beta-catenin-like repeat
HEAT_2 PF13646 164 - 267 4.1e-06 HEAT repeats
Arm PF00514 189 - 230 3.9e-08 Armadillo/beta-catenin-like repeat
Arm PF00514 243 - 271 4.1e-08 Armadillo/beta-catenin-like repeat
Arm PF00514 274 - 312 8.9e-10 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 278 - 470 7e-11 ARMC5
Arm PF00514 316 - 356 5.8e-10 Armadillo/beta-catenin-like repeat
Arm PF00514 358 - 397 3.9e-12 Armadillo/beta-catenin-like repeat
Arm PF00514 401 - 440 3.3e-07 Armadillo/beta-catenin-like repeat
Arm_3 PF16186 456 - 506 2.2e-20 Atypical Arm repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015068)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G53990 AT3G53990
fragaria_vesca FvH4_6g12670
malus_domestica MD04G1139800.v1.1 MD12G1155300.v1.1
prunus_persica Prupe.6G265200_v2.0.a1
pyrus_communis pycom04g12770
rosa_chinensis RchiOBHm_Chr3g0464511
rosa_laevigata RLG00000024689
rosa_roxburghii Rroxscaffold_6G00415600
rosa_rugosa Rorug03G0008900 Rorug03G0072800
rosa_samantha Rh3BG135100 Rh3CG137700 Rh3DG136400
rosa_wichuraiana Rw3G011040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 443
AccB7I CCANNNNNTGG 1 cut(s) 1586
AccI GTMKAC 1 cut(s) 1098
AccII CGCG 3 cut(s) 20, 65, 150
AccIII TCCGGA 1 cut(s) 848
AciI CCGC 9 cut(s) 34, 37, 56, 65, 76, 79, 148, 164, 916
AclWI GGATC 2 cut(s) 588, 1268
AcsI RAATTY 4 cut(s) 828, 1218, 1342, 1443
AcuI CTGAAG 3 cut(s) 170, 380, 1582
AcyI GRCGYC 1 cut(s) 440
AdeI CACNNNGTG 1 cut(s) 1520
AfaI GTAC 4 cut(s) 47, 588, 817, 900
AfiI CCNNNNNNNGG 3 cut(s) 583, 1544, 1586
AjnI CCWGG 3 cut(s) 860, 1305, 1516
AjuI GAANNNNNNNTTGG 2 cut(s) 649, 681
AleI CACNNNNGTG 1 cut(s) 455
AloI GAACNNNNNNTCC 2 cut(s) 864, 896
Alw21I GWGCWC 2 cut(s) 219, 604
Alw26I GTCTC 1 cut(s) 1466
AlwI GGATC 2 cut(s) 588, 1268
Ama87I CYCGRG 1 cut(s) 269
Aor13HI TCCGGA 1 cut(s) 848
AoxI GGCC 2 cut(s) 11, 1303
ApeKI GCWGC 5 cut(s) 166, 265, 312, 407, 1166
ApoI RAATTY 4 cut(s) 828, 1218, 1342, 1443
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
Asp700I GAANNNNTTC 1 cut(s) 333
AspLEI GCGC 4 cut(s) 84, 147, 199, 312
AspS9I GGNCC 3 cut(s) 31, 1115, 1568
AsuC2I CCSGG 1 cut(s) 578
AsuHPI GGTGA 5 cut(s) 572, 953, 973, 1511, 1532
AvaI CYCGRG 1 cut(s) 269
AvaII GGWCC 3 cut(s) 31, 1115, 1568
BaeGI GKGCMC 2 cut(s) 260, 1352
BanII GRGCYC 3 cut(s) 418, 604, 796
Bbv12I GWGCWC 2 cut(s) 219, 604
BbvCI CCTCAGC 2 cut(s) 27, 1395
BbvI GCAGC 5 cut(s) 178, 277, 324, 419, 1153
BccI CCATC 5 cut(s) 806, 891, 895, 901, 1588
BceAI ACGGC 1 cut(s) 821
BciT130I CCWGG 3 cut(s) 862, 1307, 1518
BclI TGATCA 2 cut(s) 963, 1207
BcnI CCSGG 1 cut(s) 578
BcoDI GTCTC 1 cut(s) 1466
BfaI CTAG 2 cut(s) 212, 740
BfmI CTRYAG 3 cut(s) 263, 1092, 1421
BfoI RGCGCY 2 cut(s) 148, 200
Bme1390I CCNGG 4 cut(s) 578, 862, 1307, 1518
Bme18I GGWCC 3 cut(s) 31, 1115, 1568
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 3 cut(s) 31, 1115, 1568
BmrFI CCNGG 4 cut(s) 578, 862, 1307, 1518
BmsI GCATC 3 cut(s) 772, 1035, 1381
BpmI CTGGAG 3 cut(s) 119, 221, 1328
Bpu10I CCTNAGC 2 cut(s) 27, 1395
BpuEI CTTGAG 1 cut(s) 1490
BpuMI CCSGG 1 cut(s) 578
BsaHI GRCGYC 1 cut(s) 440
BsaJI CCNNGG 2 cut(s) 228, 860
BsaWI WCCGGW 1 cut(s) 848
BsaXI ACNNNNNCTCC 2 cut(s) 864, 894
Bsc4I CCNNNNNNNGG 3 cut(s) 583, 1544, 1586
Bse118I RCCGGY 2 cut(s) 175, 193
Bse1I ACTGG 1 cut(s) 943
Bse3DI GCAATG 1 cut(s) 426
BseAI TCCGGA 1 cut(s) 848
BseBI CCWGG 3 cut(s) 862, 1307, 1518
BseDI CCNNGG 2 cut(s) 228, 860
BseGI GGATG 4 cut(s) 883, 893, 903, 966
BseLI CCNNNNNNNGG 3 cut(s) 583, 1544, 1586
BseMI GCAATG 1 cut(s) 426
BseMII CTCAG 9 cut(s) 18, 296, 435, 491, 971, 1134, 1326, 1386, 1391
BseNI ACTGG 1 cut(s) 943
BseRI GAGGAG 1 cut(s) 83
BseSI GKGCMC 2 cut(s) 260, 1352
BseXI GCAGC 5 cut(s) 178, 277, 324, 419, 1153
Bsh1236I CGCG 3 cut(s) 20, 65, 150
BshFI GGCC 2 cut(s) 13, 1305
BsiHKAI GWGCWC 2 cut(s) 219, 604
BsiHKCI CYCGRG 1 cut(s) 269
BsiSI CCGG 4 cut(s) 176, 194, 577, 849
BslFI GGGAC 1 cut(s) 451
BslI CCNNNNNNNGG 3 cut(s) 583, 1544, 1586
BsmAI GTCTC 1 cut(s) 1466
BsmFI GGGAC 1 cut(s) 451
BsnI GGCC 2 cut(s) 13, 1305
BsoBI CYCGRG 1 cut(s) 269
Bsp1286I GDGCHC 6 cut(s) 219, 260, 418, 604, 796, 1352
Bsp13I TCCGGA 1 cut(s) 848
Bsp143I GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
Bsp19I CCATGG 1 cut(s) 228
BspACI CCGC 9 cut(s) 34, 37, 56, 65, 76, 79, 148, 164, 916
BspANI GGCC 2 cut(s) 13, 1305
BspCNI CTCAG 9 cut(s) 19, 295, 436, 492, 970, 1135, 1327, 1387, 1390
BspEI TCCGGA 1 cut(s) 848
BspFNI CGCG 3 cut(s) 20, 65, 150
BspHI TCATGA 2 cut(s) 1204, 1429
BspMAI CTGCAG 1 cut(s) 267
BspPI GGATC 2 cut(s) 588, 1268
BspQI GCTCTTC 1 cut(s) 987
BsrDI GCAATG 1 cut(s) 426
BsrFI RCCGGY 2 cut(s) 175, 193
BsrI ACTGG 1 cut(s) 943
BssAI RCCGGY 2 cut(s) 175, 193
BssECI CCNNGG 2 cut(s) 228, 860
BssMI GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
BssNI GRCGYC 1 cut(s) 440
BssT1I CCWWGG 1 cut(s) 228
Bst2UI CCWGG 3 cut(s) 862, 1307, 1518
Bst4CI ACNGT 5 cut(s) 225, 922, 1291, 1499, 1534
Bst6I CTCTTC 3 cut(s) 120, 246, 987
BstACI GRCGYC 1 cut(s) 440
BstAPI GCANNNNNTGC 1 cut(s) 172
BstC8I GCNNGC 6 cut(s) 177, 195, 531, 636, 726, 1042
BstDEI CTNAG 9 cut(s) 27, 282, 444, 500, 957, 1143, 1335, 1377, 1395
BstDSI CCRYGG 1 cut(s) 228
BstF5I GGATG 4 cut(s) 883, 893, 903, 966
BstFNI CGCG 3 cut(s) 20, 65, 150
BstH2I RGCGCY 2 cut(s) 148, 200
BstHHI GCGC 4 cut(s) 84, 147, 199, 312
BstKTI GATC 6 cut(s) 108, 583, 966, 1210, 1258, 1276
BstMAI GTCTC 1 cut(s) 1466
BstMBI GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
BstMWI GCNNNNNNNGC 8 cut(s) 62, 172, 413, 539, 640, 734, 791, 1172
BstNI CCWGG 3 cut(s) 862, 1307, 1518
BstNSI RCATGY 1 cut(s) 638
BstSCI CCNGG 4 cut(s) 576, 860, 1305, 1516
BstSFI CTRYAG 3 cut(s) 263, 1092, 1421
BstSLI GKGCMC 2 cut(s) 260, 1352
BstUI CGCG 3 cut(s) 20, 65, 150
BstV1I GCAGC 5 cut(s) 178, 277, 324, 419, 1153
BstX2I RGATCY 1 cut(s) 580
BstYI RGATCY 1 cut(s) 580
BsuRI GGCC 2 cut(s) 13, 1305
BtgI CCRYGG 1 cut(s) 228
BtsCI GGATG 4 cut(s) 883, 893, 903, 966
BtsI GCAGTG 1 cut(s) 601
BtsIMutI CAGTG 1 cut(s) 601
Cac8I GCNNGC 6 cut(s) 177, 195, 531, 636, 726, 1042
CciI TCATGA 2 cut(s) 1204, 1429
CfoI GCGC 4 cut(s) 84, 147, 199, 312
Cfr10I RCCGGY 2 cut(s) 175, 193
Cfr13I GGNCC 3 cut(s) 31, 1115, 1568
CseI GACGC 3 cut(s) 71, 420, 1109
CsiI ACCWGGT 1 cut(s) 1516
Csp6I GTAC 4 cut(s) 46, 587, 816, 899
CviAII CATG 7 cut(s) 229, 470, 635, 1170, 1205, 1232, 1430
CviQI GTAC 4 cut(s) 46, 587, 816, 899
DdeI CTNAG 9 cut(s) 27, 282, 444, 500, 957, 1143, 1335, 1377, 1395
DpnI GATC 6 cut(s) 107, 582, 965, 1209, 1257, 1275
DpnII GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
DraI TTTAAA 1 cut(s) 1018
DraIII CACNNNGTG 1 cut(s) 1520
Eam1104I CTCTTC 3 cut(s) 120, 246, 987
EarI CTCTTC 3 cut(s) 120, 246, 987
EciI GGCGGA 1 cut(s) 23
Ecl136II GAGCTC 1 cut(s) 602
Eco130I CCWWGG 1 cut(s) 228
Eco147I AGGCCT 1 cut(s) 1305
Eco24I GRGCYC 3 cut(s) 418, 604, 796
Eco47I GGWCC 3 cut(s) 31, 1115, 1568
Eco53kI GAGCTC 1 cut(s) 602
Eco57I CTGAAG 3 cut(s) 170, 380, 1582
Eco88I CYCGRG 1 cut(s) 269
EcoICRI GAGCTC 1 cut(s) 602
EcoRII CCWGG 3 cut(s) 860, 1305, 1516
EcoT14I CCWWGG 1 cut(s) 228
EcoT38I GRGCYC 3 cut(s) 418, 604, 796
ErhI CCWWGG 1 cut(s) 228
FaeI CATG 7 cut(s) 232, 473, 638, 1173, 1208, 1235, 1433
FalI AAGNNNNNCTT 2 cut(s) 368, 400
FaqI GGGAC 1 cut(s) 451
FatI CATG 7 cut(s) 228, 469, 634, 1169, 1204, 1231, 1429
FbaI TGATCA 2 cut(s) 963, 1207
FblI GTMKAC 1 cut(s) 1098
FokI GGATG 4 cut(s) 870, 880, 890, 953
FriOI GRGCYC 3 cut(s) 418, 604, 796
FspBI CTAG 2 cut(s) 212, 740
GlaI GCGC 4 cut(s) 83, 146, 198, 311
GsuI CTGGAG 3 cut(s) 119, 221, 1328
HaeII RGCGCY 2 cut(s) 148, 200
HaeIII GGCC 2 cut(s) 13, 1305
HapII CCGG 4 cut(s) 176, 194, 577, 849
HgaI GACGC 3 cut(s) 71, 420, 1109
HhaI GCGC 4 cut(s) 84, 147, 199, 312
Hin1I GRCGYC 1 cut(s) 440
Hin1II CATG 7 cut(s) 232, 473, 638, 1173, 1208, 1235, 1433
Hin6I GCGC 4 cut(s) 82, 145, 197, 310
HinP1I GCGC 4 cut(s) 82, 145, 197, 310
HincII GTYRAC 1 cut(s) 1099
HindII GTYRAC 1 cut(s) 1099
HindIII AAGCTT 2 cut(s) 1038, 1463
HinfI GANTC 9 cut(s) 115, 563, 607, 751, 845, 1084, 1417, 1426, 1590
HpaII CCGG 4 cut(s) 176, 194, 577, 849
HphI GGTGA 5 cut(s) 572, 953, 973, 1511, 1532
Hpy166II GTNNAC 3 cut(s) 61, 1099, 1118
Hpy188I TCNGA 7 cut(s) 445, 606, 750, 811, 926, 1005, 1559
Hpy8I GTNNAC 3 cut(s) 61, 1099, 1118
Hpy99I CGWCG 1 cut(s) 1103
HpyAV CCTTC 6 cut(s) 370, 1010, 1027, 1295, 1315, 1447
HpyCH4III ACNGT 5 cut(s) 225, 922, 1291, 1499, 1534
HpyCH4IV ACGT 2 cut(s) 440, 1524
HpyCH4V TGCA 5 cut(s) 265, 638, 687, 952, 1169
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 172, 413, 539, 640, 734, 791, 1172
HpyF3I CTNAG 9 cut(s) 27, 282, 444, 500, 957, 1143, 1335, 1377, 1395
HpySE526I ACGT 2 cut(s) 440, 1524
Hsp92I GRCGYC 1 cut(s) 440
Hsp92II CATG 7 cut(s) 232, 473, 638, 1173, 1208, 1235, 1433
HspAI GCGC 4 cut(s) 82, 145, 197, 310
Kpn2I TCCGGA 1 cut(s) 848
KroI GCCGGC 2 cut(s) 175, 193
KroNI GCCGGC 2 cut(s) 177, 195
Ksp22I TGATCA 2 cut(s) 963, 1207
Kzo9I GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
LguI GCTCTTC 1 cut(s) 987
LmnI GCTCC 2 cut(s) 599, 885
Lsp1109I GCAGC 5 cut(s) 178, 277, 324, 419, 1153
LweI GCATC 3 cut(s) 772, 1035, 1381
MabI ACCWGGT 1 cut(s) 1516
MaeI CTAG 2 cut(s) 212, 740
MaeII ACGT 2 cut(s) 440, 1524
MaeIII GTNAC 3 cut(s) 934, 1285, 1520
MalI GATC 6 cut(s) 107, 582, 965, 1209, 1257, 1275
MboI GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
MfeI CAATTG 4 cut(s) 170, 303, 321, 1383
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 6 cut(s) 219, 260, 418, 604, 796, 1352
MlyI GAGTC 2 cut(s) 854, 1420
MmeI TCCRAC 5 cut(s) 904, 994, 1306, 1464, 1553
MreI CGCCGGCG 1 cut(s) 193
MroI TCCGGA 1 cut(s) 848
MroNI GCCGGC 2 cut(s) 175, 193
MroXI GAANNNNTTC 1 cut(s) 333
MseI TTAA 3 cut(s) 720, 1017, 1461
MslI CAYNNNNRTG 2 cut(s) 455, 759
MspA1I CMGCKG 1 cut(s) 1067
MspI CCGG 4 cut(s) 176, 194, 577, 849
MspR9I CCNGG 4 cut(s) 578, 862, 1307, 1518
MunI CAATTG 4 cut(s) 170, 303, 321, 1383
MvaI CCWGG 3 cut(s) 862, 1307, 1518
MvnI CGCG 3 cut(s) 20, 65, 150
MwoI GCNNNNNNNGC 8 cut(s) 62, 172, 413, 539, 640, 734, 791, 1172
NaeI GCCGGC 2 cut(s) 177, 195
NciI CCSGG 1 cut(s) 578
NcoI CCATGG 1 cut(s) 228
NdeII GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
NgoMIV GCCGGC 2 cut(s) 175, 193
NlaIII CATG 7 cut(s) 232, 473, 638, 1173, 1208, 1235, 1433
NmuCI GTSAC 1 cut(s) 1520
NspI RCATGY 1 cut(s) 638
OliI CACNNNNGTG 1 cut(s) 455
PaeI GCATGC 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 269
PagI TCATGA 2 cut(s) 1204, 1429
PceI AGGCCT 1 cut(s) 1305
PciSI GCTCTTC 1 cut(s) 987
PcsI WCGNNNNNNNCGW 1 cut(s) 11
PdiI GCCGGC 2 cut(s) 177, 195
PdmI GAANNNNTTC 1 cut(s) 333
PfeI GAWTC 7 cut(s) 115, 563, 607, 751, 1084, 1417, 1590
PflFI GACNNNGTC 1 cut(s) 673
PflMI CCANNNNNTGG 1 cut(s) 1586
PleI GAGTC 2 cut(s) 853, 1420
PpsI GAGTC 2 cut(s) 853, 1420
Psp124BI GAGCTC 1 cut(s) 604
Psp6I CCWGG 3 cut(s) 860, 1305, 1516
PspGI CCWGG 3 cut(s) 860, 1305, 1516
PspPI GGNCC 3 cut(s) 31, 1115, 1568
PspXI VCTCGAGB 1 cut(s) 269
PstI CTGCAG 1 cut(s) 267
PsuI RGATCY 1 cut(s) 580
PsyI GACNNNGTC 1 cut(s) 673
PvuII CAGCTG 1 cut(s) 1067
RsaI GTAC 4 cut(s) 47, 588, 817, 900
RsaNI GTAC 4 cut(s) 46, 587, 816, 899
RseI CAYNNNNRTG 2 cut(s) 455, 759
SacI GAGCTC 1 cut(s) 604
SalI GTCGAC 1 cut(s) 1097
SapI GCTCTTC 1 cut(s) 987
SaqAI TTAA 3 cut(s) 720, 1017, 1461
Sau3AI GATC 6 cut(s) 105, 580, 963, 1207, 1255, 1273
Sau96I GGNCC 3 cut(s) 31, 1115, 1568
SchI GAGTC 2 cut(s) 854, 1420
ScrFI CCNGG 4 cut(s) 578, 862, 1307, 1518
SduI GDGCHC 6 cut(s) 219, 260, 418, 604, 796, 1352
SexAI ACCWGGT 1 cut(s) 1516
SfaNI GCATC 3 cut(s) 772, 1035, 1381
SfcI CTRYAG 3 cut(s) 263, 1092, 1421
Sfr274I CTCGAG 1 cut(s) 269
SgrAI CRCCGGYG 1 cut(s) 193
SinI GGWCC 3 cut(s) 31, 1115, 1568
SlaI CTCGAG 1 cut(s) 269
SmiMI CAYNNNNRTG 2 cut(s) 455, 759
SmlI CTYRAG 2 cut(s) 269, 1469
SmoI CTYRAG 2 cut(s) 269, 1469
SphI GCATGC 1 cut(s) 638
SseBI AGGCCT 1 cut(s) 1305
SsiI CCGC 9 cut(s) 34, 37, 56, 65, 76, 79, 148, 164, 916
SspI AATATT 1 cut(s) 931
SspMI CTAG 2 cut(s) 212, 740
SstI GAGCTC 1 cut(s) 604
StuI AGGCCT 1 cut(s) 1305
StyD4I CCNGG 4 cut(s) 576, 860, 1305, 1516
StyI CCWWGG 1 cut(s) 228
TaaI ACNGT 5 cut(s) 225, 922, 1291, 1499, 1534
TaiI ACGT 2 cut(s) 443, 1527
TaqI TCGA 3 cut(s) 270, 402, 1098
TauI GCSGC 5 cut(s) 39, 79, 82, 150, 166
TfiI GAWTC 7 cut(s) 115, 563, 607, 751, 1084, 1417, 1590
Tru1I TTAA 3 cut(s) 720, 1017, 1461
Tru9I TTAA 3 cut(s) 720, 1017, 1461
TscAI CASTG 1 cut(s) 601
TseFI GTSAC 1 cut(s) 1520
TseI GCWGC 5 cut(s) 166, 265, 312, 407, 1166
Tsp45I GTSAC 1 cut(s) 1520
TspDTI ATGAA 5 cut(s) 377, 389, 780, 789, 1518
TspGWI ACGGA 1 cut(s) 886
TspRI CASTG 1 cut(s) 601
Tth111I GACNNNGTC 1 cut(s) 673
Van91I CCANNNNNTGG 1 cut(s) 1586
VpaK11BI GGWCC 3 cut(s) 31, 1115, 1568
XapI RAATTY 4 cut(s) 828, 1218, 1342, 1443
XceI RCATGY 1 cut(s) 638
XhoI CTCGAG 1 cut(s) 269
XmiI GTMKAC 1 cut(s) 1098
XmnI GAANNNNTTC 1 cut(s) 333
XspI CTAG 2 cut(s) 212, 740
ZraI GACGTC 1 cut(s) 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.