Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0018941

Physical Location & Seq

Genomic Coordinates Reverse (-)

7023868 .. 7025890

Gene Structure 2023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0090100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGCAAGCTCAAGGTCAAGGTCCAAAACGAAAACGAAAACGAAAACCCAAACCCAGACTACGATTAAGGTTAACAGCCCCCACATTGATAACATTGTGTTTGACAGTAGCAGCCTTCCTTCACCTCTTTGGGAAGACGGCTACAGGCCAGGCATCGTGGCTGGCCCAGGGGACCCGGAGGACTTGCCTGAAGTTTTCGACAAGGTGATGAACAGCCCTGAAGGCTTTATGAAGAATTTTGTGAAGATGTTTGATAACCTGTTAACAGACGGCTACAAGGACTTGGCTATGGAGATTGGGAATAGTCTTACGGAAGAGGGTGTTATACCCCAGATTATGGTCTTGACAGGGATTATTGATGAGTATGCTGAGGCTGGCAAGACCATGGAGGCTCTTTATGTGTACAGGATGATTTGGGAACATTGTGCCCTCAATGCTTACACTTACAGTGTTATCATCAAAGCACTAGCTGCGGATCCGGAGCCCAATTTTCTTGGGGTCGCCAAGGAATGTGTGATGGAGATGATGGGGAAGGGAATGCAGCCCAATGCCAAGACTTACACGGCCGTGCTTGAGGCGTATGCAGGGCATGAGAAGATGGAGGAGGGCAAGATGTTTCTGCAGGAGATGAAAGCGAATGGGTTTGTGGCGGACAGGAAGGCAATGAGGGCTATGAGAAATGTTCTCAAGAGTAAACGATCTCTGGTCAAAACCATCATTGAGATTCTGTTTGATAACTCGGAAGACTATTCAGGTGACTCAGAAGATGATGATGATGCTATAAAGAAATCCAACAAAATGATGGAATATTTTAACTTCCCTCCTAATGGCTATGCTGGCAACAAACACGTCGTTGAGGACGACCCAGAAAACCCCAAAGATTTGGAACAAGTCTTCGACATAATGTGCAAGACAGAACCCCTCATCCACACTTTCACCAGGATGGTGAACATGCTAAAAAAAGATGGATTTCTGTCCCAAGCCCAGGAGATAAGGGCTGAGTTAGACTTGGGAGGAAATATACCTGAAGTCGTGACACACACCGGCGTCATTGAGATCTATGCCAAGAGTGATCAAGCCAAGGAGGCTCACAAGGTTTTCCTGCGCATGTTATCCCTCGGAGTTGCTCCAAATGCATACACTTATAGTGTTATCATTAAGGCACTTGCTAAAGACTCTAACTTCCTTGAAGATGCTAAGAAGTACTTGCGGGAAATGATGGATAAGGGAATGCAGCCCAATGCCAGGACATACACCCCTGTGTTCAAGGCCTTTGCCCGGCTGGAGGAGGATAATGTGAAGAAAGGGAAGGACTTTCTGATGGAGATGAAAGCTAAGGGATTCAGGGTTAAAAAGAAGGCTGTGATGGAGGTTCTCAAGGGAAGAAAAGGACCTGTGGTTGAAACCGTTATCAGTATTCTCTTCGGCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005666 GO:0030880 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0055029 GO:0061695 GO:0070013 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03020 ko04623 ko05169 map00230 map00240 map01100 map03020 map04623 map05169

Pfam Domains

Protein Families

HTH_9 RNA_pol_Rpc82

Protein Analysis

477

Amino Acids

53.66

Weight (kDa)

5.96

Isoelectric Point (pI)

40.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	342 - 391	1.3e-11	PPR repeat family
PPR_3	PF13812	342 - 389	6.7e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	356 - 460	5e-10	Pentacotripeptide-repeat region of PRORP

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0018941)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0346601 RchiOBHm_Chr2g0108991
rosa_multiflora	Rmu_sc0000762.1_g000062 Rmu_sc0001512.1_g000007 Rmu_sc0004343.1_g000007
rosa_rugosa	Rorug03G0090100 Rorug04G0254300 Rorug05G0270300 Rorug07G0046000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1106
AccB7I	CCANNNNNTGG	1 cut(s)	337
AccIII	TCCGGA	1 cut(s)	478
AciI	CCGC	3 cut(s)	473, 650, 1210
AclWI	GGATC	2 cut(s)	470, 483
AcoI	YGGCCR	1 cut(s)	564
AcsI	RAATTY	1 cut(s)	235
AcuI	CTGAAG	3 cut(s)	210, 240, 1047
AcyI	GRCGYC	1 cut(s)	1047
AfaI	GTAC	2 cut(s)	404, 1205
AfiI	CCNNNNNNNGG	6 cut(s)	337, 827, 985, 1245, 1278, 1285
AflIII	ACRYGT	1 cut(s)	847
AgsI	TTSAA	3 cut(s)	1190, 1267, 1403
AjiI	CACGTC	1 cut(s)	850
AjnI	CCWGG	5 cut(s)	148, 166, 938, 984, 1244
AleI	CACNNNNGTG	2 cut(s)	566, 1259
AloI	GAACNNNNNNTCC	2 cut(s)	909, 941
AluBI	AGCT	3 cut(s)	9, 470, 1334
AluI	AGCT	3 cut(s)	9, 470, 1334
AlwI	GGATC	2 cut(s)	470, 483
Aor13HI	TCCGGA	1 cut(s)	478
AoxI	GGCC	4 cut(s)	146, 163, 564, 1269
ApeKI	GCWGC	4 cut(s)	111, 470, 541, 1234
ApoI	RAATTY	1 cut(s)	235
AspLEI	GCGC	1 cut(s)	1107
AspS9I	GGNCC	4 cut(s)	21, 164, 172, 1391
AsuC2I	CCSGG	2 cut(s)	176, 1279
AsuHPI	GGTGA	5 cut(s)	114, 217, 767, 928, 958
AvaII	GGWCC	3 cut(s)	21, 172, 1391
BaeGI	GKGCMC	1 cut(s)	430
BamHI	GGATCC	1 cut(s)	475
BanII	GRGCYC	1 cut(s)	486
BbsI	GAAGAC	3 cut(s)	141, 750, 886
BbvCI	CCTCAGC	1 cut(s)	369
BbvI	GCAGC	4 cut(s)	123, 457, 553, 1246
BceAI	ACGGC	4 cut(s)	154, 286, 551, 579
BciT130I	CCWGG	5 cut(s)	150, 168, 940, 986, 1246
BclI	TGATCA	1 cut(s)	1072
BcnI	CCSGG	2 cut(s)	176, 1279
BfaI	CTAG	1 cut(s)	467
BfmI	CTRYAG	2 cut(s)	142, 620
BglI	GCCNNNNNGGC	2 cut(s)	222, 1085
BglII	AGATCT	1 cut(s)	1056
BisI	GCNGC	4 cut(s)	112, 471, 542, 1235
BlsI	GCNGC	4 cut(s)	113, 472, 543, 1236
BmcAI	AGTACT	1 cut(s)	1205
Bme1390I	CCNGG	7 cut(s)	150, 168, 176, 940, 986, 1246, 1279
Bme18I	GGWCC	3 cut(s)	21, 172, 1391
BmgBI	CACGTC	1 cut(s)	850
BmgT120I	GGNCC	4 cut(s)	21, 164, 172, 1391
BmiI	GGNNCC	4 cut(s)	173, 174, 477, 483
BmrFI	CCNGG	7 cut(s)	150, 168, 176, 940, 986, 1246, 1279
BmsI	GCATC	3 cut(s)	162, 766, 1183
BpiI	GAAGAC	3 cut(s)	141, 750, 886
BpmI	CTGGAG	1 cut(s)	1304
Bpu10I	CCTNAGC	2 cut(s)	369, 1335
BpuEI	CTTGAG	3 cut(s)	593, 671, 1361
BpuMI	CCSGG	2 cut(s)	176, 1279
BsaHI	GRCGYC	1 cut(s)	1047
BsaJI	CCNNGG	7 cut(s)	166, 167, 384, 504, 984, 1080, 1117
BsaWI	WCCGGW	1 cut(s)	478
Bsc4I	CCNNNNNNNGG	6 cut(s)	337, 827, 985, 1245, 1278, 1285
Bse118I	RCCGGY	1 cut(s)	1043
Bse3DI	GCAATG	1 cut(s)	669
BseAI	TCCGGA	1 cut(s)	478
BseBI	CCWGG	5 cut(s)	150, 168, 940, 986, 1246
BseDI	CCNNGG	7 cut(s)	166, 167, 384, 504, 984, 1080, 1117
BseGI	GGATG	3 cut(s)	414, 924, 948
BseLI	CCNNNNNNNGG	6 cut(s)	337, 827, 985, 1245, 1278, 1285
BseMI	GCAATG	1 cut(s)	669
BseMII	CTCAG	3 cut(s)	360, 774, 990
BseRI	GAGGAG	2 cut(s)	617, 1301
BseSI	GKGCMC	1 cut(s)	430
BseX3I	CGGCCG	1 cut(s)	564
BseXI	GCAGC	4 cut(s)	123, 457, 553, 1246
Bsh1285I	CGRYCG	1 cut(s)	567
BshFI	GGCC	4 cut(s)	148, 165, 566, 1271
BsiEI	CGRYCG	1 cut(s)	567
BsiSI	CCGG	4 cut(s)	176, 479, 1044, 1279
BslFI	GGGAC	2 cut(s)	185, 961
BslI	CCNNNNNNNGG	6 cut(s)	337, 827, 985, 1245, 1278, 1285
BsmFI	GGGAC	2 cut(s)	185, 961
BsmI	GAATGC	2 cut(s)	543, 1236
BsnI	GGCC	4 cut(s)	148, 165, 566, 1271
Bsp1286I	GDGCHC	2 cut(s)	430, 486
Bsp13I	TCCGGA	1 cut(s)	478
Bsp1407I	TGTACA	1 cut(s)	402
Bsp143I	GATC	4 cut(s)	475, 698, 1056, 1072
Bsp19I	CCATGG	1 cut(s)	384
BspACI	CCGC	3 cut(s)	473, 650, 1210
BspANI	GGCC	4 cut(s)	148, 165, 566, 1271
BspCNI	CTCAG	3 cut(s)	361, 773, 991
BspEI	TCCGGA	1 cut(s)	478
BspLI	GGNNCC	4 cut(s)	173, 174, 477, 483
BspMAI	CTGCAG	1 cut(s)	624
BspPI	GGATC	2 cut(s)	470, 483
BsrDI	GCAATG	1 cut(s)	669
BsrFI	RCCGGY	1 cut(s)	1043
BsrGI	TGTACA	1 cut(s)	402
BssAI	RCCGGY	1 cut(s)	1043
BssECI	CCNNGG	7 cut(s)	166, 167, 384, 504, 984, 1080, 1117
BssMI	GATC	4 cut(s)	475, 698, 1056, 1072
BssNI	GRCGYC	1 cut(s)	1047
BssT1I	CCWWGG	3 cut(s)	384, 504, 1080
Bst2UI	CCWGG	5 cut(s)	150, 168, 940, 986, 1246
Bst4CI	ACNGT	3 cut(s)	107, 449, 1408
Bst6I	CTCTTC	2 cut(s)	309, 1427
BstACI	GRCGYC	1 cut(s)	1047
BstAPI	GCANNNNNTGC	1 cut(s)	470
BstAUI	TGTACA	1 cut(s)	402
BstC8I	GCNNGC	4 cut(s)	7, 163, 376, 838
BstDEI	CTNAG	5 cut(s)	369, 760, 999, 1197, 1335
BstDSI	CCRYGG	1 cut(s)	384
BstF5I	GGATG	3 cut(s)	414, 924, 948
BstHHI	GCGC	1 cut(s)	1107
BstKTI	GATC	4 cut(s)	478, 701, 1059, 1075
BstMBI	GATC	4 cut(s)	475, 698, 1056, 1072
BstMCI	CGRYCG	1 cut(s)	567
BstMWI	GCNNNNNNNGC	7 cut(s)	222, 434, 470, 668, 837, 1085, 1133
BstNI	CCWGG	5 cut(s)	150, 168, 940, 986, 1246
BstNSI	RCATGY	2 cut(s)	955, 1111
BstSCI	CCNGG	7 cut(s)	148, 166, 174, 938, 984, 1244, 1277
BstSFI	CTRYAG	2 cut(s)	142, 620
BstSLI	GKGCMC	1 cut(s)	430
BstV1I	GCAGC	4 cut(s)	123, 457, 553, 1246
BstV2I	GAAGAC	3 cut(s)	141, 750, 886
BstX2I	RGATCY	2 cut(s)	475, 1056
BstXI	CCANNNNNNTGG	1 cut(s)	883
BstYI	RGATCY	2 cut(s)	475, 1056
BstZI	CGGCCG	1 cut(s)	564
BsuRI	GGCC	4 cut(s)	148, 165, 566, 1271
BtgI	CCRYGG	1 cut(s)	384
BtrI	CACGTC	1 cut(s)	850
BtsCI	GGATG	3 cut(s)	414, 924, 948
BtsIMutI	CAGTG	1 cut(s)	454
Cac8I	GCNNGC	4 cut(s)	7, 163, 376, 838
CfoI	GCGC	1 cut(s)	1107
Cfr10I	RCCGGY	1 cut(s)	1043
Cfr13I	GGNCC	4 cut(s)	21, 164, 172, 1391
CseI	GACGC	1 cut(s)	1036
Csp6I	GTAC	2 cut(s)	403, 1204
CviAII	CATG	4 cut(s)	385, 590, 952, 1108
CviQI	GTAC	2 cut(s)	403, 1204
DdeI	CTNAG	5 cut(s)	369, 760, 999, 1197, 1335
DpnI	GATC	4 cut(s)	477, 700, 1058, 1074
DpnII	GATC	4 cut(s)	475, 698, 1056, 1072
EaeI	YGGCCR	1 cut(s)	564
EagI	CGGCCG	1 cut(s)	564
Eam1104I	CTCTTC	2 cut(s)	309, 1427
EarI	CTCTTC	2 cut(s)	309, 1427
EciI	GGCGGA	1 cut(s)	665
EclXI	CGGCCG	1 cut(s)	564
Eco130I	CCWWGG	3 cut(s)	384, 504, 1080
Eco147I	AGGCCT	1 cut(s)	1271
Eco24I	GRGCYC	1 cut(s)	486
Eco47I	GGWCC	3 cut(s)	21, 172, 1391
Eco52I	CGGCCG	1 cut(s)	564
Eco57I	CTGAAG	3 cut(s)	210, 240, 1047
EcoO109I	RGGNCCY	2 cut(s)	172, 1391
EcoRII	CCWGG	5 cut(s)	148, 166, 938, 984, 1244
EcoT14I	CCWWGG	3 cut(s)	384, 504, 1080
EcoT22I	ATGCAT	1 cut(s)	1138
EcoT38I	GRGCYC	1 cut(s)	486
ErhI	CCWWGG	3 cut(s)	384, 504, 1080
FaeI	CATG	4 cut(s)	388, 593, 955, 1111
FalI	AAGNNNNNCTT	2 cut(s)	1190, 1222
FaqI	GGGAC	2 cut(s)	185, 961
FatI	CATG	4 cut(s)	384, 589, 951, 1107
FauI	CCCGC	1 cut(s)	1203
FbaI	TGATCA	1 cut(s)	1072
Fnu4HI	GCNGC	4 cut(s)	112, 471, 542, 1235
FokI	GGATG	3 cut(s)	421, 911, 955
FriOI	GRGCYC	1 cut(s)	486
Fsp4HI	GCNGC	4 cut(s)	112, 471, 542, 1235
FspBI	CTAG	1 cut(s)	467
FspI	TGCGCA	1 cut(s)	1106
GlaI	GCGC	1 cut(s)	1106
GluI	GCNGC	4 cut(s)	112, 471, 542, 1235
GsuI	CTGGAG	1 cut(s)	1304
HaeIII	GGCC	4 cut(s)	148, 165, 566, 1271
HapII	CCGG	4 cut(s)	176, 479, 1044, 1279
HgaI	GACGC	1 cut(s)	1036
HhaI	GCGC	1 cut(s)	1107
Hin1I	GRCGYC	1 cut(s)	1047
Hin1II	CATG	4 cut(s)	388, 593, 955, 1111
Hin6I	GCGC	1 cut(s)	1105
HinP1I	GCGC	1 cut(s)	1105
HincII	GTYRAC	2 cut(s)	73, 264
HindII	GTYRAC	2 cut(s)	73, 264
HinfI	GANTC	4 cut(s)	724, 758, 1175, 1341
HpaI	GTTAAC	2 cut(s)	73, 264
HpaII	CCGG	4 cut(s)	176, 479, 1044, 1279
HphI	GGTGA	5 cut(s)	114, 217, 767, 928, 958
Hpy166II	GTNNAC	5 cut(s)	73, 264, 403, 695, 949
Hpy188I	TCNGA	4 cut(s)	742, 763, 1121, 1320
Hpy188III	TCNNGA	4 cut(s)	343, 479, 688, 1033
Hpy8I	GTNNAC	5 cut(s)	73, 264, 403, 695, 949
Hpy99I	CGWCG	1 cut(s)	854
HpyAV	CCTTC	7 cut(s)	125, 129, 215, 526, 652, 1303, 1351
HpyCH4III	ACNGT	3 cut(s)	107, 449, 1408
HpyCH4IV	ACGT	1 cut(s)	849
HpyCH4V	TGCA	6 cut(s)	541, 584, 622, 909, 1136, 1234
HpyF10VI	GCNNNNNNNGC	7 cut(s)	222, 434, 470, 668, 837, 1085, 1133
HpyF3I	CTNAG	5 cut(s)	369, 760, 999, 1197, 1335
HpySE526I	ACGT	1 cut(s)	849
Hsp92I	GRCGYC	1 cut(s)	1047
Hsp92II	CATG	4 cut(s)	388, 593, 955, 1111
HspAI	GCGC	1 cut(s)	1105
KflI	GGGWCCC	1 cut(s)	172
Kpn2I	TCCGGA	1 cut(s)	478
Ksp22I	TGATCA	1 cut(s)	1072
KspAI	GTTAAC	2 cut(s)	73, 264
Kzo9I	GATC	4 cut(s)	475, 698, 1056, 1072
LmnI	GCTCC	2 cut(s)	481, 1132
Lsp1109I	GCAGC	4 cut(s)	123, 457, 553, 1246
LweI	GCATC	3 cut(s)	162, 766, 1183
MaeI	CTAG	1 cut(s)	467
MaeII	ACGT	1 cut(s)	849
MaeIII	GTNAC	2 cut(s)	755, 1033
MalI	GATC	4 cut(s)	477, 700, 1058, 1074
MboI	GATC	4 cut(s)	475, 698, 1056, 1072
MflI	RGATCY	2 cut(s)	475, 1056
MhlI	GDGCHC	2 cut(s)	430, 486
MluCI	AATT	2 cut(s)	235, 487
MlyI	GAGTC	2 cut(s)	752, 1169
MmeI	TCCRAC	1 cut(s)	816
Mph1103I	ATGCAT	1 cut(s)	1138
MroI	TCCGGA	1 cut(s)	478
MseI	TTAA	6 cut(s)	66, 72, 263, 813, 1158, 1350
MslI	CAYNNNNRTG	3 cut(s)	566, 941, 1259
MspI	CCGG	4 cut(s)	176, 479, 1044, 1279
MspR9I	CCNGG	7 cut(s)	150, 168, 176, 940, 986, 1246, 1279
Mva1269I	GAATGC	2 cut(s)	543, 1236
MvaI	CCWGG	5 cut(s)	150, 168, 940, 986, 1246
MwoI	GCNNNNNNNGC	7 cut(s)	222, 434, 470, 668, 837, 1085, 1133
NciI	CCSGG	2 cut(s)	176, 1279
NcoI	CCATGG	1 cut(s)	384
NdeII	GATC	4 cut(s)	475, 698, 1056, 1072
NlaIII	CATG	4 cut(s)	388, 593, 955, 1111
NlaIV	GGNNCC	4 cut(s)	173, 174, 477, 483
NmuCI	GTSAC	2 cut(s)	755, 1033
NsbI	TGCGCA	1 cut(s)	1106
NsiI	ATGCAT	1 cut(s)	1138
NspI	RCATGY	2 cut(s)	955, 1111
OliI	CACNNNNGTG	2 cut(s)	566, 1259
PasI	CCCWGGG	1 cut(s)	167
PceI	AGGCCT	1 cut(s)	1271
PcsI	WCGNNNNNNNCGW	1 cut(s)	858
PctI	GAATGC	2 cut(s)	543, 1236
PfeI	GAWTC	2 cut(s)	724, 1341
PflMI	CCANNNNNTGG	1 cut(s)	337
PkrI	GCNGC	4 cut(s)	113, 472, 543, 1236
PleI	GAGTC	2 cut(s)	752, 1169
PpsI	GAGTC	2 cut(s)	752, 1169
PpuMI	RGGWCCY	2 cut(s)	172, 1391
Psp5II	RGGWCCY	2 cut(s)	172, 1391
Psp6I	CCWGG	5 cut(s)	148, 166, 938, 984, 1244
PspGI	CCWGG	5 cut(s)	148, 166, 938, 984, 1244
PspN4I	GGNNCC	4 cut(s)	173, 174, 477, 483
PspPI	GGNCC	4 cut(s)	21, 164, 172, 1391
PspPPI	RGGWCCY	2 cut(s)	172, 1391
PstI	CTGCAG	1 cut(s)	624
PsuI	RGATCY	2 cut(s)	475, 1056
RsaI	GTAC	2 cut(s)	404, 1205
RsaNI	GTAC	2 cut(s)	403, 1204
RseI	CAYNNNNRTG	3 cut(s)	566, 941, 1259
SaqAI	TTAA	6 cut(s)	66, 72, 263, 813, 1158, 1350
SatI	GCNGC	4 cut(s)	112, 471, 542, 1235
Sau3AI	GATC	4 cut(s)	475, 698, 1056, 1072
Sau96I	GGNCC	4 cut(s)	21, 164, 172, 1391
ScaI	AGTACT	1 cut(s)	1205
SchI	GAGTC	2 cut(s)	752, 1169
ScrFI	CCNGG	7 cut(s)	150, 168, 176, 940, 986, 1246, 1279
SduI	GDGCHC	2 cut(s)	430, 486
SfaNI	GCATC	3 cut(s)	162, 766, 1183
SfcI	CTRYAG	2 cut(s)	142, 620
SgrAI	CRCCGGYG	1 cut(s)	1043
SinI	GGWCC	3 cut(s)	21, 172, 1391
SmiMI	CAYNNNNRTG	3 cut(s)	566, 941, 1259
SmlI	CTYRAG	4 cut(s)	10, 572, 686, 1376
SmoI	CTYRAG	4 cut(s)	10, 572, 686, 1376
Sse9I	AATT	2 cut(s)	235, 487
SseBI	AGGCCT	1 cut(s)	1271
SsiI	CCGC	3 cut(s)	473, 650, 1210
SspI	AATATT	1 cut(s)	809
SspMI	CTAG	1 cut(s)	467
StuI	AGGCCT	1 cut(s)	1271
StyD4I	CCNGG	7 cut(s)	148, 166, 174, 938, 984, 1244, 1277
StyI	CCWWGG	3 cut(s)	384, 504, 1080
TaaI	ACNGT	3 cut(s)	107, 449, 1408
TaiI	ACGT	1 cut(s)	852
TaqI	TCGA	2 cut(s)	198, 897
TasI	AATT	2 cut(s)	235, 487
TatI	WGTACW	2 cut(s)	402, 1203
TfiI	GAWTC	2 cut(s)	724, 1341
Tru1I	TTAA	6 cut(s)	66, 72, 263, 813, 1158, 1350
Tru9I	TTAA	6 cut(s)	66, 72, 263, 813, 1158, 1350
TscAI	CASTG	1 cut(s)	454
TseFI	GTSAC	2 cut(s)	755, 1033
TseI	GCWGC	4 cut(s)	111, 470, 541, 1234
Tsp45I	GTSAC	2 cut(s)	755, 1033
TspDTI	ATGAA	4 cut(s)	224, 245, 644, 1343
TspGWI	ACGGA	1 cut(s)	326
TspRI	CASTG	1 cut(s)	454
Van91I	CCANNNNNTGG	1 cut(s)	337
VpaK11BI	GGWCC	3 cut(s)	21, 172, 1391
XapI	RAATTY	1 cut(s)	235
XceI	RCATGY	2 cut(s)	955, 1111
XcmI	CCANNNNNNNNNTGG	1 cut(s)	799
XspI	CTAG	1 cut(s)	467
ZrmI	AGTACT	1 cut(s)	1205
Zsp2I	ATGCAT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.