Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003863

Physical Location & Seq

Genomic Coordinates Forward (+)

16345701 .. 16349581

Gene Structure 3881 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0187800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGGCAACCGTAGCAGTAGTGAACCTTAATGCAACAACCAATGGTGCTCTTGCTCATGTGGACATGGTAACATCCTCTCTTGCTCATACCGCAGAGAAGCCTGCAGTGACTTTCGAACTCGTTGCCTTAGTCACTGTAAAGAATATTCACCAGAAGGTAAATATCAATGTCGACACAATGCTTCATTGGTTCGGCGACAGAAGACAAGATGATTACAAGGGTGGGGTTCTTCTACAGCTTGTTAGTACTCAAACTGCCCCAAAGGGAGTGAAGCCGAAACTAAGCCAGGAAGCTGTATTGGATTGGACAAAGAATCCGAAAATGGGTGATGAGAAGAACAGTTACCAAGTCAAGTTTGTGGTGGACTCAACATTTGGGATGCCAGGAGCCATTACAGTGAGTAACAGATATGATGAGGAGTTTTATTTGGATAGCATTAACATTGAAGGTCTTGTTCACTTTGCCTGCAACTCTTGGGTTCAACCAGATCAGAAGTCTAAAGCTGCAAAAAGAATCTTCTTCTCTACTAAGGCATACTTACCCAATGAGACACCAGCTGGGCTGAAAGAGCTAAGAGAAATGGAGCTGATTCAACTGAGGGGCGATGGGACTGGGCTTAGATTGCAATCTGATAGAATATACGACTACGACAGTTACAATGACATTGGAAATCCAGATAAGGGAATTGAGTACATGAGACCTACCCTTGGAGGCAATGTTCACCCACACCCTAGACGCTGTCGAACTGGACGCCCTCCAACCAAGACAGATGAGAATATGGAGTCACCGGTGAGCGAATTCGAGACAATCTATGTGCCTAGAGATGAAGAGTTTGAGCAGCCCAAACAAGAAGCTCTAAATGTCGGAAAGTTGAAAGGAACTGTCCGCAATATAACTCATGCACTTTCAACAATTACTGCAGATAGAAATGTCAAGGGGTATTCGAACATCAATGGTCTGTATACAGATTCTTCTTCTCTTCAATCCAAGACCCAGCCGGGAACTCAAATTTTGAACAAAGTCCACGAATTCCTCAAATTTGACCCCCCAAAATTAAACTCAAGGGAGATATATTGTCTGCCAGATGACCAATTTGGGCGCCAAACCATTGCAGGCATAAACCCTTTAAGCATAGAAAGGCTCGAGGTTTTCCCACCTGTAAGCAAACTAGATACCTCCATTTATGGTCCTCAAGAATCAGCACTCAAGGAAGAGCATATAATAGGCCAACTAAATGGCATGTCCATACAACAGGCATTGGAAGAAAACAAACTGTTCATACTAGACTACCATGACATTTTTCTTCCATTTCTCAACAAAATAAACGCTCTAGATGACCGGAAAGCTTATGCAACACAAACAATTTTTTTCCTGACATCATTAGGAACTTTGAAGCCCATTGCTATTGAGCTCAGTCTTTCAGATTCAGCATCCAAGCAGGTTCTCACTCCTCCAATTGATGCTACGACAAGTTGGCTTTGGCAGCTTGGCAAGGCTCATGTATGCTCCAATGATGCCGGTGTTCATCAACTCGTTCATCACTGGTTACGCACCCACGCCTGCGTAGAACCGATTACAATAGCAACTCATAGACAACTGAGTGTTATGCATCCTATCTACAAGCTTCTCAAACCTCACTTGCGCTACACCTTGAAGGTAAATGCTATGGCCCGTAAGGATCTCATCAACGCCGGAGGGACAGTCGAGTCCAATTTTACTGCTGCCAAATACTGCATGGAGTTCAGTTGTGCTGCTTATCGAGATTGGTGGCGCTTTGACCTTGAAGGTCTTCCTGCAGATCTCATTAGAAGAGGAATAGCTGTACCAGACACGAGTCAAGTGCATGGGCTAAAACTACTCATTCAAGACTACCCTTATGCAACAGATGGGCTCCTCATATGGTCAGCAATTGAGACATTGGTTCAAACCTATGTTAATTACTACTACCCTAATGCAAGTTTGGTCACTTCAGATACTGAACTCCAATCCTGGTACAATGAATTTATCAATTTGGGACATGCCGATCTTCGCGACGCTAGCTGGTGGCCAAAACTCTCTACGCAGGAGGATCTCATCTCCATTCTCACCACCATCATTTGGCTCACATCAGCGCAACACGCTGCTCTAAACTTCGGGCAATACCCTTATGGTGGCCATGTCCCAACCCGCCCACCACACATGAGGAGACTAATTCCAAAAAACAATGACCCGGAGTATGCTTCTTTCATTAGGGATCCTCAGCAGTACTTCATATCCTCATTGCCGAGTTTATTTGAAGCAACGAAGTACATGGCTGTAATTGATATAATCTCGGCACATTCACCGGATGAAGAGTACATTGGGGAGAGAAAAGACTTGTCAAACTTGTCAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

791

Amino Acids

89.22

Weight (kDa)

6.04

Isoelectric Point (pI)

43.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	91 - 174	2.4e-06	PLAT/LH2 domain
Lipoxygenase	PF00305	187 - 785	2.6e-261	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20860
fragaria_vesca	FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080 FvH4_6g23080
malus_domestica	MD12G1065800.v1.1 MD14G1065800.v1.1
prunus_persica	Prupe.7G068700_v2.0.a1
pyrus_communis	pycom12g05710 pycom14g05320
rosa_chinensis	RchiOBHm_Chr3g0480931
rosa_laevigata	RLG00000023440
rosa_multiflora	Rmu_sc0006028.1_g000015 Rmu_sc0006048.1_g000005
rosa_roxburghii	Rroxscaffold_6G00400870
rosa_rugosa	Rorug03G0187700 Rorug03G0187800 Rorug03G0187900 Rorug03G0188000
rosa_samantha	Rh3AG239200 Rh3BG273400 Rh3CG269000 Rh3DG265000
rosa_wichuraiana	Rw3G021400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1705
Acc36I	ACCTGC	1 cut(s)	1429
AccB1I	GGYRCC	1 cut(s)	1098
AccB7I	CCANNNNNTGG	1 cut(s)	2097
AccI	GTMKAC	2 cut(s)	171, 962
AccII	CGCG	1 cut(s)	2031
AciI	CCGC	3 cut(s)	90, 886, 2167
AclWI	GGATC	4 cut(s)	1686, 2076, 2228, 2241
AcoI	YGGCCR	2 cut(s)	2045, 2152
AcsI	RAATTY	5 cut(s)	797, 1008, 1028, 1037, 2000
AcuI	CTGAAG	1 cut(s)	1953
AcyI	GRCGYC	2 cut(s)	751, 1099
AfaI	GTAC	7 cut(s)	247, 692, 1824, 1994, 2246, 2288, 2336
AfiI	CCNNNNNNNGG	5 cut(s)	323, 680, 707, 2097, 2150
AgeI	ACCGGT	1 cut(s)	787
AjnI	CCWGG	3 cut(s)	285, 382, 1988
AjuI	GAANNNNNNNTTGG	2 cut(s)	2322, 2354
AloI	GAACNNNNNNTCC	2 cut(s)	702, 734
Alw21I	GWGCWC	2 cut(s)	49, 1413
Alw26I	GTCTC	5 cut(s)	542, 691, 797, 1907, 2179
AlwI	GGATC	4 cut(s)	1686, 2076, 2228, 2241
AlwNI	CAGNNNCTG	1 cut(s)	1976
Ama87I	CYCGRG	1 cut(s)	1142
AoxI	GGCC	4 cut(s)	1225, 1668, 2045, 2152
ApeKI	GCWGC	6 cut(s)	503, 838, 1483, 1721, 1751, 2120
ApoI	RAATTY	5 cut(s)	797, 1008, 1028, 1037, 2000
ArsI	GACNNNNNNTTYG	2 cut(s)	356, 388
AsiGI	ACCGGT	1 cut(s)	787
Asp700I	GAANNNNTTC	1 cut(s)	1788
AspLEI	GCGC	4 cut(s)	1101, 1644, 1773, 2113
AspS9I	GGNCC	2 cut(s)	1187, 1669
AsuC2I	CCSGG	2 cut(s)	999, 2210
AsuHPI	GGTGA	7 cut(s)	140, 338, 713, 777, 802, 2077, 2313
AsuII	TTCGAA	2 cut(s)	114, 944
AsuNHI	GCTAGC	1 cut(s)	2036
AvaI	CYCGRG	1 cut(s)	1142
AvaII	GGWCC	1 cut(s)	1187
BalI	TGGCCA	2 cut(s)	2047, 2154
BamHI	GGATCC	1 cut(s)	2233
BanI	GGYRCC	1 cut(s)	1098
BanII	GRGCYC	2 cut(s)	1413, 1893
BarI	GAAGNNNNNNTAC	2 cut(s)	326, 358
BauI	CACGAG	1 cut(s)	1831
BbsI	GAAGAC	2 cut(s)	208, 1781
Bbv12I	GWGCWC	2 cut(s)	49, 1413
BbvCI	CCTCAGC	1 cut(s)	2238
BbvI	GCAGC	6 cut(s)	490, 850, 1495, 1708, 1738, 2107
BccI	CCATC	3 cut(s)	599, 1880, 2099
BcgI	CGANNNNNNTGC	4 cut(s)	104, 138, 1822, 1856
BciT130I	CCWGG	3 cut(s)	287, 384, 1990
BcnI	CCSGG	2 cut(s)	999, 2210
BcoDI	GTCTC	5 cut(s)	542, 691, 797, 1907, 2179
BfaI	CTAG	6 cut(s)	732, 819, 1169, 1283, 1331, 2037
BfmI	CTRYAG	4 cut(s)	102, 233, 918, 1794
BfoI	RGCGCY	2 cut(s)	1102, 1774
BfuAI	ACCTGC	1 cut(s)	1429
BglII	AGATCT	1 cut(s)	1798
BisI	GCNGC	6 cut(s)	504, 839, 1484, 1722, 1752, 2121
BlsI	GCNGC	6 cut(s)	505, 840, 1485, 1723, 1753, 2122
BmcAI	AGTACT	2 cut(s)	247, 2246
Bme1390I	CCNGG	5 cut(s)	287, 384, 999, 1990, 2210
Bme18I	GGWCC	1 cut(s)	1187
BmeT110I	CYCGRG	1 cut(s)	1142
BmgT120I	GGNCC	2 cut(s)	1187, 1669
BmiI	GGNNCC	4 cut(s)	388, 1100, 1892, 2235
BmrFI	CCNGG	5 cut(s)	287, 384, 999, 1990, 2210
BmrI	ACTGGG	1 cut(s)	621
BmsI	GCATC	5 cut(s)	369, 1439, 1450, 1504, 1618
BmtI	GCTAGC	1 cut(s)	2040
BmuI	ACTGGG	1 cut(s)	621
BoxI	GACNNNNGTC	1 cut(s)	1833
BpiI	GAAGAC	2 cut(s)	208, 1781
Bpu10I	CCTNAGC	1 cut(s)	2238
Bpu14I	TTCGAA	2 cut(s)	114, 944
BpuEI	CTTGAG	3 cut(s)	1045, 1176, 1190
BpuMI	CCSGG	2 cut(s)	999, 2210
BsaBI	GATNNNNATC	1 cut(s)	625
BsaHI	GRCGYC	2 cut(s)	751, 1099
BsaI	GGTCTC	1 cut(s)	691
BsaJI	CCNNGG	1 cut(s)	706
BsaWI	WCCGGW	3 cut(s)	787, 1338, 2323
BsaXI	ACNNNNNCTCC	4 cut(s)	702, 732, 1686, 1716
Bsc4I	CCNNNNNNNGG	5 cut(s)	323, 680, 707, 2097, 2150
Bse118I	RCCGGY	2 cut(s)	787, 1517
Bse1I	ACTGG	3 cut(s)	616, 751, 1547
Bse3DI	GCAATG	4 cut(s)	721, 1107, 1398, 2258
Bse8I	GATNNNNATC	1 cut(s)	625
BseBI	CCWGG	3 cut(s)	287, 384, 1990
BseDI	CCNNGG	1 cut(s)	706
BseGI	GGATG	5 cut(s)	71, 384, 1430, 1609, 2332
BseJI	GATNNNNATC	1 cut(s)	625
BseLI	CCNNNNNNNGG	5 cut(s)	323, 680, 707, 2097, 2150
BseMI	GCAATG	4 cut(s)	721, 1107, 1398, 2258
BseMII	CTCAG	4 cut(s)	587, 1426, 1589, 2252
BseNI	ACTGG	3 cut(s)	616, 751, 1547
BseRI	GAGGAG	4 cut(s)	431, 1440, 1883, 2197
BseXI	GCAGC	6 cut(s)	490, 850, 1495, 1708, 1738, 2107
BseYI	CCCAGC	2 cut(s)	557, 993
Bsh1236I	CGCG	1 cut(s)	2031
BshFI	GGCC	4 cut(s)	1227, 1670, 2047, 2154
BshNI	GGYRCC	1 cut(s)	1098
BshTI	ACCGGT	1 cut(s)	787
BsiHKAI	GWGCWC	2 cut(s)	49, 1413
BsiHKCI	CYCGRG	1 cut(s)	1142
BsiSI	CCGG	7 cut(s)	788, 998, 1339, 1518, 1692, 2210, 2324
BslFI	GGGAC	4 cut(s)	622, 1711, 2028, 2144
BslI	CCNNNNNNNGG	5 cut(s)	323, 680, 707, 2097, 2150
BsmAI	GTCTC	5 cut(s)	542, 691, 797, 1907, 2179
BsmFI	GGGAC	4 cut(s)	622, 1711, 2028, 2144
BsnI	GGCC	4 cut(s)	1227, 1670, 2047, 2154
Bso31I	GGTCTC	1 cut(s)	691
BsoBI	CYCGRG	1 cut(s)	1142
Bsp119I	TTCGAA	2 cut(s)	114, 944
Bsp1286I	GDGCHC	3 cut(s)	49, 1413, 1893
Bsp143I	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
Bsp68I	TCGCGA	1 cut(s)	2031
BspACI	CCGC	3 cut(s)	90, 886, 2167
BspANI	GGCC	4 cut(s)	1227, 1670, 2047, 2154
BspCNI	CTCAG	4 cut(s)	588, 1425, 1590, 2251
BspFNI	CGCG	1 cut(s)	2031
BspLI	GGNNCC	4 cut(s)	388, 1100, 1892, 2235
BspMAI	CTGCAG	3 cut(s)	106, 922, 1798
BspMI	ACCTGC	1 cut(s)	1429
BspOI	GCTAGC	1 cut(s)	2040
BspPI	GGATC	4 cut(s)	1686, 2076, 2228, 2241
BspQI	GCTCTTC	1 cut(s)	1206
BspT104I	TTCGAA	2 cut(s)	114, 944
BspT107I	GGYRCC	1 cut(s)	1098
BspTNI	GGTCTC	1 cut(s)	691
BsrDI	GCAATG	4 cut(s)	721, 1107, 1398, 2258
BsrFI	RCCGGY	2 cut(s)	787, 1517
BsrI	ACTGG	3 cut(s)	616, 751, 1547
BssAI	RCCGGY	2 cut(s)	787, 1517
BssECI	CCNNGG	1 cut(s)	706
BssMI	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
BssNAI	GTATAC	1 cut(s)	963
BssNI	GRCGYC	2 cut(s)	751, 1099
BssSI	CACGAG	1 cut(s)	1831
BssT1I	CCWWGG	1 cut(s)	706
Bst1107I	GTATAC	1 cut(s)	963
Bst2BI	CACGAG	1 cut(s)	1831
Bst2UI	CCWGG	3 cut(s)	287, 384, 1990
Bst4CI	ACNGT	8 cut(s)	10, 136, 341, 397, 653, 883, 1275, 1702
Bst6I	CTCTTC	5 cut(s)	822, 984, 1206, 1804, 2325
BstACI	GRCGYC	2 cut(s)	751, 1099
BstBI	TTCGAA	2 cut(s)	114, 944
BstC8I	GCNNGC	5 cut(s)	102, 466, 1114, 1561, 2038
BstDEI	CTNAG	9 cut(s)	127, 281, 528, 572, 596, 617, 1412, 1598, 2238
BstF5I	GGATG	5 cut(s)	71, 384, 1430, 1609, 2332
BstFNI	CGCG	1 cut(s)	2031
BstH2I	RGCGCY	2 cut(s)	1102, 1774
BstHHI	GCGC	4 cut(s)	1101, 1644, 1773, 2113
BstKTI	GATC	6 cut(s)	490, 1681, 1801, 2026, 2071, 2236
BstMAI	GTCTC	5 cut(s)	542, 691, 797, 1907, 2179
BstMBI	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 89, 568, 622, 1483, 2037, 2117
BstNI	CCWGG	3 cut(s)	287, 384, 1990
BstNSI	RCATGY	2 cut(s)	1243, 2021
BstPAI	GACNNNNGTC	1 cut(s)	1833
BstSCI	CCNGG	5 cut(s)	285, 382, 997, 1988, 2208
BstSFI	CTRYAG	4 cut(s)	102, 233, 918, 1794
BstUI	CGCG	1 cut(s)	2031
BstV1I	GCAGC	6 cut(s)	490, 850, 1495, 1708, 1738, 2107
BstV2I	GAAGAC	2 cut(s)	208, 1781
BstX2I	RGATCY	4 cut(s)	1678, 1798, 2068, 2233
BstXI	CCANNNNNNTGG	1 cut(s)	1235
BstYI	RGATCY	4 cut(s)	1678, 1798, 2068, 2233
BstZ17I	GTATAC	1 cut(s)	963
BsuRI	GGCC	4 cut(s)	1227, 1670, 2047, 2154
BtgZI	GCGATG	1 cut(s)	618
BtsCI	GGATG	5 cut(s)	71, 384, 1430, 1609, 2332
BtsI	GCAGTG	1 cut(s)	111
BtsIMutI	CAGTG	4 cut(s)	111, 132, 402, 1540
BtuMI	TCGCGA	1 cut(s)	2031
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	5 cut(s)	102, 466, 1114, 1561, 2038
CaiI	CAGNNNCTG	1 cut(s)	1976
CfoI	GCGC	4 cut(s)	1101, 1644, 1773, 2113
Cfr10I	RCCGGY	2 cut(s)	787, 1517
Cfr13I	GGNCC	2 cut(s)	1187, 1669
CseI	GACGC	3 cut(s)	744, 759, 2042
Csp6I	GTAC	7 cut(s)	246, 691, 1823, 1993, 2245, 2287, 2335
CspAI	ACCGGT	1 cut(s)	787
CviQI	GTAC	7 cut(s)	246, 691, 1823, 1993, 2245, 2287, 2335
DdeI	CTNAG	9 cut(s)	127, 281, 528, 572, 596, 617, 1412, 1598, 2238
DinI	GGCGCC	1 cut(s)	1100
DpnI	GATC	6 cut(s)	489, 1680, 1800, 2025, 2070, 2235
DpnII	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
DrdI	GACNNNNNNGTC	1 cut(s)	1705
DseDI	GACNNNNNNGTC	1 cut(s)	1705
EaeI	YGGCCR	2 cut(s)	2045, 2152
Eam1104I	CTCTTC	5 cut(s)	822, 984, 1206, 1804, 2325
EarI	CTCTTC	5 cut(s)	822, 984, 1206, 1804, 2325
Ecl136II	GAGCTC	1 cut(s)	1411
Eco130I	CCWWGG	1 cut(s)	706
Eco24I	GRGCYC	2 cut(s)	1413, 1893
Eco31I	GGTCTC	1 cut(s)	691
Eco47I	GGWCC	1 cut(s)	1187
Eco53kI	GAGCTC	1 cut(s)	1411
Eco57I	CTGAAG	1 cut(s)	1953
Eco88I	CYCGRG	1 cut(s)	1142
EcoICRI	GAGCTC	1 cut(s)	1411
EcoRI	GAATTC	2 cut(s)	797, 1028
EcoRII	CCWGG	3 cut(s)	285, 382, 1988
EcoT14I	CCWWGG	1 cut(s)	706
EcoT22I	ATGCAT	1 cut(s)	1611
EcoT38I	GRGCYC	2 cut(s)	1413, 1893
EgeI	GGCGCC	1 cut(s)	1100
EheI	GGCGCC	1 cut(s)	1100
ErhI	CCWWGG	1 cut(s)	706
FalI	AAGNNNNNCTT	2 cut(s)	521, 553
FaqI	GGGAC	4 cut(s)	622, 1711, 2028, 2144
FauI	CCCGC	1 cut(s)	2174
FauNDI	CATATG	1 cut(s)	1898
FblI	GTMKAC	2 cut(s)	171, 962
Fnu4HI	GCNGC	6 cut(s)	504, 839, 1484, 1722, 1752, 2121
FokI	GGATG	5 cut(s)	58, 391, 1417, 1596, 2339
FriOI	GRGCYC	2 cut(s)	1413, 1893
Fsp4HI	GCNGC	6 cut(s)	504, 839, 1484, 1722, 1752, 2121
FspBI	CTAG	6 cut(s)	732, 819, 1169, 1283, 1331, 2037
GlaI	GCGC	4 cut(s)	1100, 1643, 1772, 2112
GluI	GCNGC	6 cut(s)	504, 839, 1484, 1722, 1752, 2121
GsaI	CCCAGC	2 cut(s)	561, 997
HaeII	RGCGCY	2 cut(s)	1102, 1774
HaeIII	GGCC	4 cut(s)	1227, 1670, 2047, 2154
HapII	CCGG	7 cut(s)	788, 998, 1339, 1518, 1692, 2210, 2324
HgaI	GACGC	3 cut(s)	744, 759, 2042
HhaI	GCGC	4 cut(s)	1101, 1644, 1773, 2113
Hin1I	GRCGYC	2 cut(s)	751, 1099
Hin6I	GCGC	4 cut(s)	1099, 1642, 1771, 2111
HinP1I	GCGC	4 cut(s)	1099, 1642, 1771, 2111
HincII	GTYRAC	1 cut(s)	172
HindII	GTYRAC	1 cut(s)	172
HindIII	AAGCTT	2 cut(s)	1344, 1622
HpaII	CCGG	7 cut(s)	788, 998, 1339, 1518, 1692, 2210, 2324
HphI	GGTGA	7 cut(s)	140, 338, 713, 777, 802, 2077, 2313
Hpy166II	GTNNAC	8 cut(s)	22, 61, 172, 364, 457, 721, 963, 1024
Hpy188I	TCNGA	6 cut(s)	318, 492, 631, 866, 1423, 1972
Hpy188III	TCNNGA	8 cut(s)	674, 802, 1193, 1331, 1372, 1760, 1865, 2030
Hpy8I	GTNNAC	8 cut(s)	22, 61, 172, 364, 457, 721, 963, 1024
Hpy99I	CGWCG	1 cut(s)	2036
HpyAV	CCTTC	4 cut(s)	148, 440, 1648, 1778
HpyCH4III	ACNGT	8 cut(s)	10, 136, 341, 397, 653, 883, 1275, 1702
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 89, 568, 622, 1483, 2037, 2117
HpyF3I	CTNAG	9 cut(s)	127, 281, 528, 572, 596, 617, 1412, 1598, 2238
Hsp92I	GRCGYC	2 cut(s)	751, 1099
HspAI	GCGC	4 cut(s)	1099, 1642, 1771, 2111
KasI	GGCGCC	1 cut(s)	1098
Kzo9I	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
LguI	GCTCTTC	1 cut(s)	1206
LmnI	GCTCC	4 cut(s)	386, 583, 1511, 1896
Lsp1109I	GCAGC	6 cut(s)	490, 850, 1495, 1708, 1738, 2107
LweI	GCATC	5 cut(s)	369, 1439, 1450, 1504, 1618
MaeI	CTAG	6 cut(s)	732, 819, 1169, 1283, 1331, 2037
MaeIII	GTNAC	9 cut(s)	67, 106, 130, 341, 401, 653, 783, 1545, 1963
MalI	GATC	6 cut(s)	489, 1680, 1800, 2025, 2070, 2235
MboI	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
MfeI	CAATTG	2 cut(s)	1455, 1908
MflI	RGATCY	4 cut(s)	1678, 1798, 2068, 2233
MhlI	GDGCHC	3 cut(s)	49, 1413, 1893
MlsI	TGGCCA	2 cut(s)	2047, 2154
MluNI	TGGCCA	2 cut(s)	2047, 2154
Mly113I	GGCGCC	1 cut(s)	1099
MlyI	GAGTC	4 cut(s)	359, 791, 1715, 1843
MmeI	TCCRAC	2 cut(s)	782, 844
Mox20I	TGGCCA	2 cut(s)	2047, 2154
Mph1103I	ATGCAT	1 cut(s)	1611
MroXI	GAANNNNTTC	1 cut(s)	1788
MscI	TGGCCA	2 cut(s)	2047, 2154
MseI	TTAA	5 cut(s)	27, 438, 1055, 1127, 1935
MslI	CAYNNNNRTG	1 cut(s)	395
Msp20I	TGGCCA	2 cut(s)	2047, 2154
MspA1I	CMGCKG	1 cut(s)	557
MspI	CCGG	7 cut(s)	788, 998, 1339, 1518, 1692, 2210, 2324
MspR9I	CCNGG	5 cut(s)	287, 384, 999, 1990, 2210
MunI	CAATTG	2 cut(s)	1455, 1908
MvaI	CCWGG	3 cut(s)	287, 384, 1990
MvnI	CGCG	1 cut(s)	2031
MwoI	GCNNNNNNNGC	7 cut(s)	11, 89, 568, 622, 1483, 2037, 2117
NarI	GGCGCC	1 cut(s)	1099
NciI	CCSGG	2 cut(s)	999, 2210
NdeI	CATATG	1 cut(s)	1898
NdeII	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
NheI	GCTAGC	1 cut(s)	2036
NlaIV	GGNNCC	4 cut(s)	388, 1100, 1892, 2235
NmeAIII	GCCGAG	2 cut(s)	2289, 2291
NmuCI	GTSAC	4 cut(s)	106, 130, 783, 1963
NruI	TCGCGA	1 cut(s)	2031
NsiI	ATGCAT	1 cut(s)	1611
NspI	RCATGY	2 cut(s)	1243, 2021
NspV	TTCGAA	2 cut(s)	114, 944
PaeR7I	CTCGAG	1 cut(s)	1142
PciSI	GCTCTTC	1 cut(s)	1206
PdmI	GAANNNNTTC	1 cut(s)	1788
PfeI	GAWTC	6 cut(s)	313, 513, 589, 968, 1196, 1424
PflFI	GACNNNGTC	1 cut(s)	738
PflMI	CCANNNNNTGG	1 cut(s)	2097
PinAI	ACCGGT	1 cut(s)	787
PkrI	GCNGC	6 cut(s)	505, 840, 1485, 1723, 1753, 2122
PleI	GAGTC	4 cut(s)	359, 790, 1714, 1842
PluTI	GGCGCC	1 cut(s)	1102
PpsI	GAGTC	4 cut(s)	359, 790, 1714, 1842
PshAI	GACNNNNGTC	1 cut(s)	1833
Psp124BI	GAGCTC	1 cut(s)	1413
Psp6I	CCWGG	3 cut(s)	285, 382, 1988
PspFI	CCCAGC	2 cut(s)	557, 993
PspGI	CCWGG	3 cut(s)	285, 382, 1988
PspN4I	GGNNCC	4 cut(s)	388, 1100, 1892, 2235
PspPI	GGNCC	2 cut(s)	1187, 1669
PspXI	VCTCGAGB	1 cut(s)	1142
PstI	CTGCAG	3 cut(s)	106, 922, 1798
PstNI	CAGNNNCTG	1 cut(s)	1976
PsuI	RGATCY	4 cut(s)	1678, 1798, 2068, 2233
PsyI	GACNNNGTC	1 cut(s)	738
PvuII	CAGCTG	1 cut(s)	557
RruI	TCGCGA	1 cut(s)	2031
RsaI	GTAC	7 cut(s)	247, 692, 1824, 1994, 2246, 2288, 2336
RsaNI	GTAC	7 cut(s)	246, 691, 1823, 1993, 2245, 2287, 2335
RseI	CAYNNNNRTG	1 cut(s)	395
SacI	GAGCTC	1 cut(s)	1413
SalI	GTCGAC	1 cut(s)	170
SapI	GCTCTTC	1 cut(s)	1206
SaqAI	TTAA	5 cut(s)	27, 438, 1055, 1127, 1935
SatI	GCNGC	6 cut(s)	504, 839, 1484, 1722, 1752, 2121
Sau3AI	GATC	6 cut(s)	487, 1678, 1798, 2023, 2068, 2233
Sau96I	GGNCC	2 cut(s)	1187, 1669
ScaI	AGTACT	2 cut(s)	247, 2246
SchI	GAGTC	4 cut(s)	359, 791, 1715, 1843
ScrFI	CCNGG	5 cut(s)	287, 384, 999, 1990, 2210
SduI	GDGCHC	3 cut(s)	49, 1413, 1893
SfaNI	GCATC	5 cut(s)	369, 1439, 1450, 1504, 1618
SfcI	CTRYAG	4 cut(s)	102, 233, 918, 1794
SfoI	GGCGCC	1 cut(s)	1100
Sfr274I	CTCGAG	1 cut(s)	1142
SfuI	TTCGAA	2 cut(s)	114, 944
SgrAI	CRCCGGYG	1 cut(s)	787
SinI	GGWCC	1 cut(s)	1187
SlaI	CTCGAG	1 cut(s)	1142
SmiMI	CAYNNNNRTG	1 cut(s)	395
SmlI	CTYRAG	4 cut(s)	1060, 1142, 1191, 1205
SmoI	CTYRAG	4 cut(s)	1060, 1142, 1191, 1205
SsiI	CCGC	3 cut(s)	90, 886, 2167
SspDI	GGCGCC	1 cut(s)	1098
SspI	AATATT	1 cut(s)	145
SspMI	CTAG	6 cut(s)	732, 819, 1169, 1283, 1331, 2037
SstI	GAGCTC	1 cut(s)	1413
StyD4I	CCNGG	5 cut(s)	285, 382, 997, 1988, 2208
StyI	CCWWGG	1 cut(s)	706
TaaI	ACNGT	8 cut(s)	10, 136, 341, 397, 653, 883, 1275, 1702
TaqI	TCGA	8 cut(s)	114, 171, 742, 801, 944, 1143, 1704, 1759
TatI	WGTACW	5 cut(s)	245, 690, 2244, 2286, 2334
TfiI	GAWTC	6 cut(s)	313, 513, 589, 968, 1196, 1424
Tru1I	TTAA	5 cut(s)	27, 438, 1055, 1127, 1935
Tru9I	TTAA	5 cut(s)	27, 438, 1055, 1127, 1935
TscAI	CASTG	4 cut(s)	111, 139, 402, 1547
TseFI	GTSAC	4 cut(s)	106, 130, 783, 1963
TseI	GCWGC	6 cut(s)	503, 838, 1483, 1721, 1751, 2120
Tsp45I	GTSAC	4 cut(s)	106, 130, 783, 1963
TspDTI	ATGAA	9 cut(s)	173, 840, 1267, 1514, 1526, 2013, 2215, 2239, 2343
TspRI	CASTG	4 cut(s)	111, 139, 402, 1547
Tth111I	GACNNNGTC	1 cut(s)	738
Van91I	CCANNNNNTGG	1 cut(s)	2097
VpaK11BI	GGWCC	1 cut(s)	1187
XapI	RAATTY	5 cut(s)	797, 1008, 1028, 1037, 2000
XbaI	TCTAGA	1 cut(s)	1330
XceI	RCATGY	2 cut(s)	1243, 2021
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1732
XhoI	CTCGAG	1 cut(s)	1142
XmiI	GTMKAC	2 cut(s)	171, 962
XmnI	GAANNNNTTC	1 cut(s)	1788
XspI	CTAG	6 cut(s)	732, 819, 1169, 1283, 1331, 2037
ZrmI	AGTACT	2 cut(s)	247, 2246
Zsp2I	ATGCAT	1 cut(s)	1611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.