Rorug04G0077800

Calcium-dependent protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0017037
Physical Location & Seq
Reverse (-)
11990623 .. 11998013
7391 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0077800.1

Sequence Viewer

Length: 2292 bp
ATGAGAAAGGAGTGTCATCCATTGTTGAGTGGAGCTAGCAGAGGATCAGCAGGTGAAGATGGAAGGTCATACAAACATGGGTTATCATCAGCTGAGATGGAGTCTTTGGCAAGCGTCTGCGAGGCTATATTTCCTCCTTTGCCATTGGCGGATCCTAGTTTTGAAGGGAAGAAGGAGGAGCTATCTGGAAATAAGGCTGTGCAGTCCTTCTACCAGGCTTCTGGGGCCCAAACTGGAATCCCAGATGAGGTTGCAGAGCTATTGGTGAAGAGGGCTTTTATGGAAGCCGTGGTTCTCGTTAGAGTGGTTTTATGGATCCTAAGCAGTAGGTTGGGGACTCTACTGTTGTGTGGTTCTCTTTGCTTGGGTGACACGTGGCCCTTCGTTCACAAGTTCTCATGTCTGCCATTGGAGAAGAGAGAGAGGGTTCTGCAGAGGTGGTTCAGTCACAGGTTTCTCACCCCTATTAGGCTTGCTTTTCTTTACGTCAAGATCCTTTGCCTCTTCATTTTCTTCACCCGGGTTGATGAAAATGCTGAAAACCCAGCATGGGAAGCCATTGGATATCAAGTAGAACCAGCTGAGAACCCGAAAAGAGTCCCAGAAGAGAGGCCTCTTCACAAGGGAATCATAGAAACCATGTACCAAACTGACACTAGCCTTCTGGATTCTCTTGCTGACAAAGGCCTCAAAGTCACACTTGACTCCAAAAACAACCTCTACAAGATCAAATGTGATGTGGTAATTGTTGGCTCTGGCTGTGGAGGAGGTGTTGCAGCAGCTGTTCTAGCAAGTTCAGGCCAGAAAGTGATTGTTCTTGAGAAAGGGAACTACTTCACTGCGTCGGATTACTCGTCTCTGGAAGGTCCATCCCAGGATCAACTGTATGAATCAGGAGGCATTCTTGCAACTGTTGATGGGAAAGTAATGATTCAGGCTGGATCAACAGTTGGTGGTGGCTCTGCTGTTAACTGGTCAGCCTGCATTAGAACACCAGACTCTTTGCTTCAGGAATGGGCCAAGGATCAAAAGATTGCCTTCTTCGGGGGATCTGAATACGTTTCTGCAATGGATGCTGTGTGTGAGAGAATCGGGGTTACAGAGAGTTGTGTAGAGGAGGGGTTCCAAAATCAAGTGCTGCGAAAAGGGTGTGAGAATTTAGGCCTTGCAGTTCACTTTGCCCCTCGCAATTCTTCGGAGAAGCATTATTGTGGATCGTGCGGTTATGGATGTAAGAAAGGAGAGAAAAAGGGGACTGATTCTACATGGCTGGTGGATGCAGTGGATCATGGTGCAGTGATCTTATCCGGTTGCAAAGCCGAGAGATTTGTATTGGAAAAGAGCTACAAGAGTGGAAGTATAAGGAAGAAGAAATGCTTGGGAGTAATGGCAAAAAGTTTATGTAACAACATAACAAAGAGACTGCAAATTGAGGCAAAAGTAACAATTTCAGCATGTGGAGCTCTTTTGACACCTCCCTTAATGATCTCTAGTGGACTAAAGAACCGGCACATTGGTCGAAATCTTCATCTCCACCCTGTCCTAATGGCCTGGGGATACTTCCCTGACTCGATTAAATCAGAATTCAAGGGTAAAAGCTATGAGGGTGGAATAATCACATCGGTCCATGAGGTCGTCTCAGCAGACTCTAGGCCAAGAGCCATCATTGAAACTCCTGCATTAGGGCCTGGAACATTTGCTGCTTTGTACCCCTGGGTGTCTGGACTAGACATAAAGAAAAGGATGCTGAGATTTTCAAGAACTGCACATGTGATTGTAATAATCCGGGATAAGGGTTCCGGGGTTGTTAGGACAGAGGGAAGAGCAAGCTTTGAGCTTGATGCATCAGACAAAGAGAACATGAAGGCTGGTTTGAGGCAGGCACTTAGGATTCTGATAGCAGCAGGAGCAGTTGAAGTTGGCACTCACCGCAGTGATGGGCTGAGACTCAAATGTGAAGGGACTGATAAGAAGGAAATAGAGGAGTTTTTGGACCAAGTTTCTGCAGATGAAGGGCCACAGTCACTGGTAGAGAAATGGACAACCTATTCCTCAGCTCATCAAATGGGGAGCTGTAGAATGGGAATCAATGAAAAAGAAGGCGCGGTTGATCAGAATGGGGAGAGCTGGGAAGCCGAAGGCCTATTCGTCTGTGATGGTAGTGTGTTGCCTAGTGCTGTTGGTGTCAATCCAATGATCACCATTGAATCAACTGCTTACTTTCTCTCAAAGAGAATAGCCGAATCTCTAAGAAAACGACAGTTTTCTGTGTTGGTTGATTCCTTTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010769 GO:0010857 GO:0010959 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0022603 GO:0022604 GO:0022898 GO:0023052 GO:0032409 GO:0032412 GO:0032870 GO:0032879 GO:0033993 GO:0034762 GO:0034765 GO:0035556 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043266 GO:0043269 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045595 GO:0046777 GO:0047484 GO:0048519 GO:0048583 GO:0048585 GO:0048638 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051128 GO:0051239 GO:0051510 GO:0051716 GO:0060284 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0080092 GO:0080134 GO:0097305 GO:0097306 GO:0140096 GO:1901000 GO:1901001 GO:1901016 GO:1901379 GO:1901564 GO:1901700 GO:1901701 GO:1901979 GO:1904062 GO:2000241 GO:2001257
KEGG Pathways
Metabolic & Signaling
ko04626 ko05145 map04626 map05145
Pfam Domains
Protein Families
EF-hand_1 EF-hand_5 EF-hand_6 EF-hand_7 EF-hand_8 Pkinase

Protein Analysis

763

Amino Acids

83.08

Weight (kDa)

7.72

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 293 - 514 2.7e-76 GMC oxidoreductase
GMC_oxred_C PF05199 611 - 736 2.5e-23 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G31500
fragaria_vesca FvH4_4g11140
malus_domestica MD09G1092200.v1.1 MD17G1082100.v1.1
prunus_persica Prupe.1G190700_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0407071
rosa_laevigata RLG00000008739
rosa_multiflora Rmu_sc0000600.1_g000002
rosa_rugosa Rorug04G0077800
rosa_samantha Rh4AG142500 Rh4CG149000 Rh4DG136600
rosa_wichuraiana Rw4G011610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 41
Acc36I ACCTGC 1 cut(s) 41
AccII CGCG 1 cut(s) 2105
AciI CCGC 4 cut(s) 149, 1221, 1930, 2105
AcsI RAATTY 2 cut(s) 1156, 1583
AcuI CTGAAG 1 cut(s) 992
AcvI CACGTG 1 cut(s) 375
AfaI GTAC 2 cut(s) 644, 1709
AfiI CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
AflIII ACRYGT 2 cut(s) 372, 1768
AgsI TTSAA 6 cut(s) 164, 1588, 1670, 1758, 1916, 2207
AjnI CCWGG 5 cut(s) 213, 873, 1550, 1687, 1712
AjuI GAANNNNNNNTTGG 2 cut(s) 1361, 1393
AleI CACNNNNGTG 1 cut(s) 1932
Alw21I GWGCWC 1 cut(s) 1465
Alw26I GTCTC 4 cut(s) 861, 1414, 1642, 1939
AlwNI CAGNNNCTG 2 cut(s) 782, 2026
Ama87I CYCGRG 1 cut(s) 519
ApaI GGGCCC 1 cut(s) 229
ApeKI GCWGC 5 cut(s) 776, 779, 1138, 1700, 1901
ApoI RAATTY 2 cut(s) 1156, 1583
Asp700I GAANNNNTTC 1 cut(s) 833
AspLEI GCGC 1 cut(s) 2105
AspS9I GGNCC 9 cut(s) 225, 226, 378, 866, 1017, 1624, 1685, 1993, 2015
AsuC2I CCSGG 4 cut(s) 520, 521, 1787, 1801
AsuHPI GGTGA 7 cut(s) 65, 277, 380, 451, 508, 1919, 2191
AsuNHI GCTAGC 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 519
AvaII GGWCC 3 cut(s) 866, 1624, 1993
BaeGI GKGCMC 1 cut(s) 229
BamHI GGATCC 2 cut(s) 151, 315
BanII GRGCYC 2 cut(s) 229, 1465
BbrPI CACGTG 1 cut(s) 375
Bbv12I GWGCWC 1 cut(s) 1465
BbvCI CCTCAGC 1 cut(s) 2053
BbvI GCAGC 5 cut(s) 788, 791, 1125, 1687, 1913
BccI CCATC 7 cut(s) 53, 91, 877, 911, 1670, 1931, 2150
BceAI ACGGC 1 cut(s) 272
BcgI CGANNNNNNTGC 2 cut(s) 1499, 1533
BciT130I CCWGG 5 cut(s) 215, 875, 1552, 1689, 1714
BciVI GTATCC 1 cut(s) 1550
BclI TGATCA 2 cut(s) 2110, 2196
BcnI CCSGG 4 cut(s) 520, 521, 1787, 1801
BcoDI GTCTC 4 cut(s) 861, 1414, 1642, 1939
BfaI CTAG 8 cut(s) 36, 156, 657, 788, 1491, 1650, 1727, 2172
BfmI CTRYAG 3 cut(s) 431, 2004, 2074
BfuAI ACCTGC 1 cut(s) 41
BfuI GTATCC 1 cut(s) 1550
BisI GCNGC 5 cut(s) 777, 780, 1139, 1701, 1902
BlsI GCNGC 5 cut(s) 778, 781, 1140, 1702, 1903
Bme1390I CCNGG 9 cut(s) 215, 520, 521, 875, 1552, 1689, 1714, 1787, 1801
Bme18I GGWCC 3 cut(s) 866, 1624, 1993
BmeT110I CYCGRG 1 cut(s) 519
BmgT120I GGNCC 9 cut(s) 225, 226, 378, 866, 1017, 1624, 1685, 1993, 2015
BmiI GGNNCC 6 cut(s) 153, 226, 227, 317, 1124, 1798
BmrFI CCNGG 9 cut(s) 215, 520, 521, 875, 1552, 1689, 1714, 1787, 1801
BmsI GCATC 5 cut(s) 1063, 1267, 1734, 1831, 1853
BmtI GCTAGC 1 cut(s) 39
BplI GAGNNNNNCTC 2 cut(s) 1622, 1654
Bpu10I CCTNAGC 2 cut(s) 320, 2053
BpuEI CTTGAG 1 cut(s) 839
BpuMI CCSGG 4 cut(s) 520, 521, 1787, 1801
BsaAI YACGTR 1 cut(s) 375
BsaJI CCNNGG 8 cut(s) 288, 519, 873, 1020, 1551, 1712, 1713, 1800
BsaWI WCCGGW 1 cut(s) 1307
BsaXI ACNNNNNCTCC 2 cut(s) 756, 786
Bsc4I CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
Bse118I RCCGGY 1 cut(s) 1506
Bse1I ACTGG 3 cut(s) 238, 977, 2031
Bse3DI GCAATG 1 cut(s) 1074
BseBI CCWGG 5 cut(s) 215, 875, 1552, 1689, 1714
BseDI CCNNGG 8 cut(s) 288, 519, 873, 1020, 1551, 1712, 1713, 1800
BseGI GGATG 6 cut(s) 16, 869, 1078, 1235, 1282, 1749
BseLI CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
BseMI GCAATG 1 cut(s) 1074
BseMII CTCAG 6 cut(s) 84, 573, 1653, 1739, 1934, 2067
BseNI ACTGG 3 cut(s) 238, 977, 2031
BseRI GAGGAG 4 cut(s) 191, 780, 1130, 1997
BseSI GKGCMC 1 cut(s) 229
BseXI GCAGC 5 cut(s) 788, 791, 1125, 1687, 1913
BseYI CCCAGC 2 cut(s) 544, 2127
BsgI GTGCAG 3 cut(s) 221, 1314, 1749
Bsh1236I CGCG 1 cut(s) 2105
BsiHKAI GWGCWC 1 cut(s) 1465
BsiHKCI CYCGRG 1 cut(s) 519
BsiSI CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
BslFI GGGAC 4 cut(s) 349, 584, 1267, 1975
BslI CCNNNNNNNGG 6 cut(s) 247, 468, 550, 1044, 1682, 1792
BsmAI GTCTC 4 cut(s) 861, 1414, 1642, 1939
BsmBI CGTCTC 2 cut(s) 861, 1642
BsmFI GGGAC 4 cut(s) 349, 584, 1267, 1975
BsmI GAATGC 1 cut(s) 900
BsoBI CYCGRG 1 cut(s) 519
Bsp120I GGGCCC 1 cut(s) 225
Bsp1286I GDGCHC 2 cut(s) 229, 1465
BspACI CCGC 4 cut(s) 149, 1221, 1930, 2105
BspCNI CTCAG 6 cut(s) 85, 574, 1652, 1740, 1935, 2066
BspFNI CGCG 1 cut(s) 2105
BspLI GGNNCC 6 cut(s) 153, 226, 227, 317, 1124, 1798
BspMAI CTGCAG 2 cut(s) 435, 2008
BspMI ACCTGC 1 cut(s) 41
BspOI GCTAGC 1 cut(s) 39
BspQI GCTCTTC 1 cut(s) 1816
BsrDI GCAATG 1 cut(s) 1074
BsrFI RCCGGY 1 cut(s) 1506
BsrI ACTGG 3 cut(s) 238, 977, 2031
BssAI RCCGGY 1 cut(s) 1506
BssECI CCNNGG 8 cut(s) 288, 519, 873, 1020, 1551, 1712, 1713, 1800
BssT1I CCWWGG 1 cut(s) 1020
Bst2UI CCWGG 5 cut(s) 215, 875, 1552, 1689, 1714
Bst4CI ACNGT 6 cut(s) 345, 885, 913, 949, 2022, 2262
Bst6I CTCTTC 6 cut(s) 263, 410, 509, 600, 621, 1816
BstAPI GCANNNNNTGC 1 cut(s) 1073
BstBAI YACGTR 1 cut(s) 375
BstC8I GCNNGC 6 cut(s) 37, 112, 474, 982, 1828, 1881
BstDEI CTNAG 9 cut(s) 93, 320, 582, 1639, 1748, 1886, 1943, 2053, 2249
BstDSI CCRYGG 1 cut(s) 288
BstENI CCTNNNNNAGG 1 cut(s) 1680
BstF5I GGATG 6 cut(s) 16, 869, 1078, 1235, 1282, 1749
BstFNI CGCG 1 cut(s) 2105
BstHHI GCGC 1 cut(s) 2105
BstMAI GTCTC 4 cut(s) 861, 1414, 1642, 1939
BstMWI GCNNNNNNNGC 7 cut(s) 224, 554, 788, 1073, 1460, 1907, 1929
BstNI CCWGG 5 cut(s) 215, 875, 1552, 1689, 1714
BstNSI RCATGY 2 cut(s) 1458, 1772
BstSCI CCNGG 9 cut(s) 213, 518, 519, 873, 1550, 1687, 1712, 1785, 1799
BstSFI CTRYAG 3 cut(s) 431, 2004, 2074
BstSLI GKGCMC 1 cut(s) 229
BstUI CGCG 1 cut(s) 2105
BstV1I GCAGC 5 cut(s) 788, 791, 1125, 1687, 1913
BstX2I RGATCY 4 cut(s) 151, 315, 492, 1049
BstXI CCANNNNNNTGG 1 cut(s) 221
BstYI RGATCY 4 cut(s) 151, 315, 492, 1049
BsuI GTATCC 1 cut(s) 1550
BtgI CCRYGG 1 cut(s) 288
BtsCI GGATG 6 cut(s) 16, 869, 1078, 1235, 1282, 1749
BtsI GCAGTG 4 cut(s) 837, 1287, 1302, 1939
BtsIMutI CAGTG 5 cut(s) 837, 1287, 1302, 1939, 2024
BveI ACCTGC 1 cut(s) 41
Cac8I GCNNGC 6 cut(s) 37, 112, 474, 982, 1828, 1881
CaiI CAGNNNCTG 2 cut(s) 782, 2026
CfoI GCGC 1 cut(s) 2105
Cfr10I RCCGGY 1 cut(s) 1506
Cfr13I GGNCC 9 cut(s) 225, 226, 378, 866, 1017, 1624, 1685, 1993, 2015
Cfr9I CCCGGG 1 cut(s) 519
CseI GACGC 2 cut(s) 103, 831
Csp6I GTAC 2 cut(s) 643, 1708
CviQI GTAC 2 cut(s) 643, 1708
DdeI CTNAG 9 cut(s) 93, 320, 582, 1639, 1748, 1886, 1943, 2053, 2249
Eam1104I CTCTTC 6 cut(s) 263, 410, 509, 600, 621, 1816
EarI CTCTTC 6 cut(s) 263, 410, 509, 600, 621, 1816
EciI GGCGGA 1 cut(s) 164
Ecl136II GAGCTC 1 cut(s) 1463
Eco130I CCWWGG 1 cut(s) 1020
Eco147I AGGCCT 4 cut(s) 613, 687, 1164, 2142
Eco24I GRGCYC 2 cut(s) 229, 1465
Eco32I GATATC 1 cut(s) 566
Eco47I GGWCC 3 cut(s) 866, 1624, 1993
Eco53kI GAGCTC 1 cut(s) 1463
Eco57I CTGAAG 1 cut(s) 992
Eco72I CACGTG 1 cut(s) 375
Eco88I CYCGRG 1 cut(s) 519
EcoICRI GAGCTC 1 cut(s) 1463
EcoNI CCTNNNNNAGG 1 cut(s) 1680
EcoO109I RGGNCCY 2 cut(s) 225, 1685
EcoRI GAATTC 1 cut(s) 1583
EcoRII CCWGG 5 cut(s) 213, 873, 1550, 1687, 1712
EcoRV GATATC 1 cut(s) 566
EcoT14I CCWWGG 1 cut(s) 1020
EcoT22I ATGCAT 1 cut(s) 1846
EcoT38I GRGCYC 2 cut(s) 229, 1465
ErhI CCWWGG 1 cut(s) 1020
Esp3I CGTCTC 2 cut(s) 861, 1642
FalI AAGNNNNNCTT 6 cut(s) 684, 716, 1022, 1054, 1361, 1393
FaqI GGGAC 4 cut(s) 349, 584, 1267, 1975
FbaI TGATCA 2 cut(s) 2110, 2196
Fnu4HI GCNGC 5 cut(s) 777, 780, 1139, 1701, 1902
FokI GGATG 6 cut(s) 3, 856, 1085, 1242, 1289, 1756
FriOI GRGCYC 2 cut(s) 229, 1465
Fsp4HI GCNGC 5 cut(s) 777, 780, 1139, 1701, 1902
FspBI CTAG 8 cut(s) 36, 156, 657, 788, 1491, 1650, 1727, 2172
GlaI GCGC 1 cut(s) 2104
GluI GCNGC 5 cut(s) 777, 780, 1139, 1701, 1902
GsaI CCCAGC 2 cut(s) 548, 2131
HapII CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
HgaI GACGC 2 cut(s) 103, 831
HhaI GCGC 1 cut(s) 2105
Hin6I GCGC 1 cut(s) 2103
HinP1I GCGC 1 cut(s) 2103
HincII GTYRAC 1 cut(s) 970
HindII GTYRAC 1 cut(s) 970
HindIII AAGCTT 1 cut(s) 1828
HpaI GTTAAC 1 cut(s) 970
HpaII CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
HphI GGTGA 7 cut(s) 65, 277, 380, 451, 508, 1919, 2191
Hpy166II GTNNAC 4 cut(s) 388, 970, 1174, 1496
Hpy188I TCNGA 7 cut(s) 847, 1054, 1198, 1582, 1849, 1896, 2115
Hpy188III TCNNGA 9 cut(s) 186, 490, 665, 818, 860, 894, 1010, 1722, 1758
Hpy8I GTNNAC 4 cut(s) 388, 970, 1174, 1496
Hpy99I CGWCG 1 cut(s) 847
HpyCH4III ACNGT 6 cut(s) 345, 885, 913, 949, 2022, 2262
HpyCH4IV ACGT 3 cut(s) 374, 486, 1059
HpyF10VI GCNNNNNNNGC 7 cut(s) 224, 554, 788, 1073, 1460, 1907, 1929
HpyF3I CTNAG 9 cut(s) 93, 320, 582, 1639, 1748, 1886, 1943, 2053, 2249
HpySE526I ACGT 3 cut(s) 374, 486, 1059
HspAI GCGC 1 cut(s) 2103
Ksp22I TGATCA 2 cut(s) 2110, 2196
KspAI GTTAAC 1 cut(s) 970
LguI GCTCTTC 1 cut(s) 1816
LmnI GCTCC 5 cut(s) 32, 178, 1460, 1907, 2070
Lsp1109I GCAGC 5 cut(s) 788, 791, 1125, 1687, 1913
LweI GCATC 5 cut(s) 1063, 1267, 1734, 1831, 1853
MaeI CTAG 8 cut(s) 36, 156, 657, 788, 1491, 1650, 1727, 2172
MaeII ACGT 3 cut(s) 374, 486, 1059
MaeIII GTNAC 7 cut(s) 368, 446, 694, 1096, 1403, 1441, 2022
MflI RGATCY 4 cut(s) 151, 315, 492, 1049
MhlI GDGCHC 2 cut(s) 229, 1465
MluCI AATT 6 cut(s) 744, 1156, 1189, 1428, 1446, 1583
MlyI GAGTC 8 cut(s) 110, 331, 606, 698, 992, 1562, 1640, 1941
MmeI TCCRAC 1 cut(s) 825
Mph1103I ATGCAT 1 cut(s) 1846
MroXI GAANNNNTTC 1 cut(s) 833
MseI TTAA 4 cut(s) 969, 1481, 1575, 2290
MslI CAYNNNNRTG 2 cut(s) 1209, 1932
MspA1I CMGCKG 3 cut(s) 92, 581, 782
MspI CCGG 5 cut(s) 520, 1308, 1507, 1786, 1800
MspR9I CCNGG 9 cut(s) 215, 520, 521, 875, 1552, 1689, 1714, 1787, 1801
Mva1269I GAATGC 1 cut(s) 900
MvaI CCWGG 5 cut(s) 215, 875, 1552, 1689, 1714
MvnI CGCG 1 cut(s) 2105
MwoI GCNNNNNNNGC 7 cut(s) 224, 554, 788, 1073, 1460, 1907, 1929
NciI CCSGG 4 cut(s) 520, 521, 1787, 1801
NheI GCTAGC 1 cut(s) 35
NlaIV GGNNCC 6 cut(s) 153, 226, 227, 317, 1124, 1798
NmeAIII GCCGAG 1 cut(s) 1345
NmuCI GTSAC 4 cut(s) 368, 446, 694, 2022
NsiI ATGCAT 1 cut(s) 1846
NspI RCATGY 2 cut(s) 1458, 1772
OliI CACNNNNGTG 1 cut(s) 1932
PaqCI CACCTGC 1 cut(s) 41
PasI CCCWGGG 1 cut(s) 1713
PceI AGGCCT 4 cut(s) 613, 687, 1164, 2142
PciI ACATGT 1 cut(s) 1768
PciSI GCTCTTC 1 cut(s) 1816
PcsI WCGNNNNNNNCGW 1 cut(s) 851
PctI GAATGC 1 cut(s) 900
PdmI GAANNNNTTC 1 cut(s) 833
PfoI TCCNGGA 1 cut(s) 1785
PkrI GCNGC 5 cut(s) 778, 781, 1140, 1702, 1903
PleI GAGTC 8 cut(s) 109, 331, 605, 698, 992, 1562, 1640, 1941
PmaCI CACGTG 1 cut(s) 375
PmlI CACGTG 1 cut(s) 375
PpsI GAGTC 8 cut(s) 109, 331, 605, 698, 992, 1562, 1640, 1941
Ppu21I YACGTR 1 cut(s) 375
PscI ACATGT 1 cut(s) 1768
Psp124BI GAGCTC 1 cut(s) 1465
Psp6I CCWGG 5 cut(s) 213, 873, 1550, 1687, 1712
PspCI CACGTG 1 cut(s) 375
PspFI CCCAGC 2 cut(s) 544, 2127
PspGI CCWGG 5 cut(s) 213, 873, 1550, 1687, 1712
PspN4I GGNNCC 6 cut(s) 153, 226, 227, 317, 1124, 1798
PspOMI GGGCCC 1 cut(s) 225
PspPI GGNCC 9 cut(s) 225, 226, 378, 866, 1017, 1624, 1685, 1993, 2015
PstI CTGCAG 2 cut(s) 435, 2008
PstNI CAGNNNCTG 2 cut(s) 782, 2026
PsuI RGATCY 4 cut(s) 151, 315, 492, 1049
PvuII CAGCTG 3 cut(s) 92, 581, 782
RsaI GTAC 2 cut(s) 644, 1709
RsaNI GTAC 2 cut(s) 643, 1708
RseI CAYNNNNRTG 2 cut(s) 1209, 1932
SacI GAGCTC 1 cut(s) 1465
SapI GCTCTTC 1 cut(s) 1816
SaqAI TTAA 4 cut(s) 969, 1481, 1575, 2290
SatI GCNGC 5 cut(s) 777, 780, 1139, 1701, 1902
Sau96I GGNCC 9 cut(s) 225, 226, 378, 866, 1017, 1624, 1685, 1993, 2015
SchI GAGTC 8 cut(s) 110, 331, 606, 698, 992, 1562, 1640, 1941
ScrFI CCNGG 9 cut(s) 215, 520, 521, 875, 1552, 1689, 1714, 1787, 1801
SduI GDGCHC 2 cut(s) 229, 1465
SfaNI GCATC 5 cut(s) 1063, 1267, 1734, 1831, 1853
SfcI CTRYAG 3 cut(s) 431, 2004, 2074
SinI GGWCC 3 cut(s) 866, 1624, 1993
SmaI CCCGGG 1 cut(s) 521
SmiMI CAYNNNNRTG 2 cut(s) 1209, 1932
SmlI CTYRAG 1 cut(s) 818
SmoI CTYRAG 1 cut(s) 818
Sse9I AATT 6 cut(s) 744, 1156, 1189, 1428, 1446, 1583
SseBI AGGCCT 4 cut(s) 613, 687, 1164, 2142
SsiI CCGC 4 cut(s) 149, 1221, 1930, 2105
SspMI CTAG 8 cut(s) 36, 156, 657, 788, 1491, 1650, 1727, 2172
SstI GAGCTC 1 cut(s) 1465
StuI AGGCCT 4 cut(s) 613, 687, 1164, 2142
StyD4I CCNGG 9 cut(s) 213, 518, 519, 873, 1550, 1687, 1712, 1785, 1799
StyI CCWWGG 1 cut(s) 1020
TaaI ACNGT 6 cut(s) 345, 885, 913, 949, 2022, 2262
TaiI ACGT 3 cut(s) 377, 489, 1062
TaqI TCGA 2 cut(s) 1519, 1571
TaqII GACCGA 1 cut(s) 1612
TasI AATT 6 cut(s) 744, 1156, 1189, 1428, 1446, 1583
Tru1I TTAA 4 cut(s) 969, 1481, 1575, 2290
Tru9I TTAA 4 cut(s) 969, 1481, 1575, 2290
TscAI CASTG 5 cut(s) 844, 1287, 1302, 1939, 2031
TseFI GTSAC 4 cut(s) 368, 446, 694, 2022
TseI GCWGC 5 cut(s) 776, 779, 1138, 1700, 1901
Tsp45I GTSAC 4 cut(s) 368, 446, 694, 2022
TspDTI ATGAA 7 cut(s) 496, 543, 903, 1517, 1877, 2025, 2106
TspMI CCCGGG 1 cut(s) 519
TspRI CASTG 5 cut(s) 844, 1287, 1302, 1939, 2031
VpaK11BI GGWCC 3 cut(s) 866, 1624, 1993
XagI CCTNNNNNAGG 1 cut(s) 1680
XapI RAATTY 2 cut(s) 1156, 1583
XceI RCATGY 2 cut(s) 1458, 1772
XmaI CCCGGG 1 cut(s) 519
XmnI GAANNNNTTC 1 cut(s) 833
XspI CTAG 8 cut(s) 36, 156, 657, 788, 1491, 1650, 1727, 2172
Zsp2I ATGCAT 1 cut(s) 1846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.