Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0005651

Physical Location & Seq

Genomic Coordinates Reverse (-)

54266212 .. 54271548

Gene Structure 5337 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0371400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGTTTCGAACCCCAATTTCCAGATTCGCCACACTTTTCAGAAACCCAAATCCCCATAAACTCTTACCCACAGAACCAATTCCCATATTCACCAAAAAAGCTCGAATCTTTGGCCCCAAACAAAAGCTCAAAATGCCATCCCAGCAAATCCTACCCATAACATACCACCCCCCATCTTCAAATCCCGCCACCACTGAAAAGCTACTAGTCAAATCTGAGGAGGACCCATCAACAAGGCTCCTCCTTTATTCACATTTCGAAGATGAAGAAAAGGCCGCGCCTTTGAAGCCCCTTCTTCCCAAGTCGGCGAGCTACACATTCAACACCTCCACCACCGCCGCCGCCGCAGCAGCAGGTTCTGCCAATAACAACCAGAAGCGGCGGCGCCGGACGGCCAGCGATAACTCGCTTTATTCGTCGTCATCCAATTCCTCATCGGAGGAGGGCGCTGCCGACCGGCAATCTATCGCCGGCGATGTGGAGCACGCCGCCGCCGAGACGTACTTGATCACCCGGCTGAGCTTGAAGCTTTTGAGCTATCTTGGGGTAGGCTACAGATGGATTACAAGATTTTTGGCCCTCGGTTGTTATTCGTTTTTACTTATGCCAGGGTTTATTCAAGTTGGCTATTACTATTTCTTCTCCAAGCAGGTCCGCAGAGGTATAGTTTATGGCGATCAACCAAGAAATAGGCTAGATCTGTATCTACCCAAAAATTCTGATGGGCCAAAACCAGTCATTGCATTTGTAACTGGTGGAGCCTGGATTATTGGTTACAAAGCATGGGGTTCTCTTTTAGGAATACAGTTATCAGAACGAGACATCATAGTGGCATGCATAGATTACAGAAATTTCCCTCAGGGTACTATCAGTGATATGGTACAGGATGCTTCTCAAGGCATCTCATTTGTATGTAATCATATTGCTGAATATGGAGGCGATCCTGATAGGGTTTATGTGATGGGACAATCAGCTGGTGCACATATTGGTGCATGCTCAATTGTTGACCAGGCAATCAAGGAGCTTGGTGAAGGAGAGAGCACTTCTTGGAGTGTTTCCCAGATAAAGGCTTACTTTGGTCTTTCTGGAGGGTACAATTTGTTTAATTTAGTAGATCACTTCCACAGTCGAGGCCTATACCGTTCAATATTTTTAGGCATAATGGAAGGGGAGCATTCATTGCAACGTTTCTCTCCTGAAGTCATGATTCAGGACTCCAATGTTAGGAGTGCTGCTTCTCTTTTACCTCCTATTATTTTATTTCATGGTACTGCAGATTATTCCATACCATCAGATGCCAGTAAGAATTTTGCAGAAACTCTTCGGAGTCTTGGAGTGAAAGCTGAATCGATTCTGTATGAAGGGAAAACTCACACAGATTTGTTTCTTCAGGATCCAATGCGAGGCGGAAAAGATCAGATGTTTGAAGACTTAGTAGCTATCATTCATGAAGGTGATTCAGAGGCCCTTGCCAAAGATGCAGTGGCTCCACCAAGAAAGCGCCTTGTACCTGAGTTCATGTTGAAGTTGGCTCACAAAGTCAGCCCATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0012505 GO:0016020 GO:0016021 GO:0030176 GO:0031224 GO:0031227 GO:0031984 GO:0042175 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044232 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

517

Amino Acids

57.17

Weight (kDa)

8.61

Isoelectric Point (pI)

43.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BD-FAE	PF20434	232 - 441	1.5e-27	BD-FAE
COesterase	PF00135	232 - 329	5.4e-11	Carboxylesterase family
Abhydrolase_3	PF07859	249 - 458	2.4e-13	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50260 AT1G50260 AT3G19830 AT3G19830 AT3G19830 AT3G19830
fragaria_vesca	FvH4_4g36720 FvH4_4g36720 FvH4_4g36720 FvH4_4g36720 FvH4_4g36720 FvH4_4g36720
malus_domestica	MD13G1007800.v1.1 MD16G1000300.v1.1
prunus_persica	Prupe.1G345200_v2.0.a1
pyrus_communis	pycom13g00640 pycom16g00490
rosa_chinensis	RchiOBHm_Chr4g0446431
rosa_multiflora	Rmu_sc0008360.1_g000007 Rmu_sc0009970.1_g000002
rosa_roxburghii	Rroxscaffold_5G00386870
rosa_rugosa	Rorug04G0371300 Rorug04G0371400
rosa_samantha	Rh4AG432900 Rh4BG442000 Rh4CG459400 Rh4DG440800
rosa_wichuraiana	Rw4G036980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	344, 640
AccB1I	GGYRCC	1 cut(s)	384
AccII	CGCG	1 cut(s)	278
AclI	AACGTT	1 cut(s)	1186
AclWI	GGATC	3 cut(s)	935, 1388, 1401
AcoI	YGGCCR	1 cut(s)	393
AcsI	RAATTY	3 cut(s)	715, 850, 1306
AcuI	CTGAAG	2 cut(s)	1218, 1373
AcyI	GRCGYC	1 cut(s)	385
AfaI	GTAC	6 cut(s)	503, 865, 882, 1094, 1270, 1509
AfiI	CCNNNNNNNGG	3 cut(s)	1066, 1224, 1403
AgsI	TTSAA	8 cut(s)	180, 286, 322, 526, 620, 1146, 1427, 1525
AhlI	ACTAGT	1 cut(s)	205
AjnI	CCWGG	3 cut(s)	607, 761, 1008
Alw21I	GWGCWC	3 cut(s)	486, 982, 1043
Alw26I	GTCTC	2 cut(s)	491, 813
Alw44I	GTGCAC	1 cut(s)	978
AlwI	GGATC	3 cut(s)	935, 1388, 1401
AlwNI	CAGNNNCTG	1 cut(s)	359
AoxI	GGCC	7 cut(s)	112, 273, 393, 576, 725, 1132, 1464
ApaLI	GTGCAC	1 cut(s)	978
ApeKI	GCWGC	4 cut(s)	347, 350, 449, 1232
ApoI	RAATTY	3 cut(s)	715, 850, 1306
Asp700I	GAANNNNTTC	3 cut(s)	78, 1320, 1350
AspLEI	GCGC	4 cut(s)	280, 387, 449, 1503
AspS9I	GGNCC	6 cut(s)	113, 223, 577, 652, 725, 1465
AsuC2I	CCSGG	1 cut(s)	514
AsuHPI	GGTGA	4 cut(s)	82, 502, 1040, 1466
AsuII	TTCGAA	2 cut(s)	7, 258
AvaII	GGWCC	2 cut(s)	223, 652
AxyI	CCTNAGG	1 cut(s)	858
BaeGI	GKGCMC	1 cut(s)	982
BamHI	GGATCC	1 cut(s)	1393
BanI	GGYRCC	1 cut(s)	384
BbsI	GAAGAC	1 cut(s)	1434
Bbv12I	GWGCWC	3 cut(s)	486, 982, 1043
BbvI	GCAGC	4 cut(s)	359, 362, 436, 1219
BccI	CCATC	7 cut(s)	145, 181, 235, 552, 716, 955, 1297
BceAI	ACGGC	1 cut(s)	408
BciT130I	CCWGG	3 cut(s)	609, 763, 1010
BclI	TGATCA	1 cut(s)	507
BcnI	CCSGG	1 cut(s)	514
BcoDI	GTCTC	2 cut(s)	491, 813
BcuI	ACTAGT	1 cut(s)	205
BfaI	CTAG	3 cut(s)	206, 695, 1552
BfmI	CTRYAG	2 cut(s)	553, 1272
BfoI	RGCGCY	3 cut(s)	388, 450, 1504
BfuAI	ACCTGC	2 cut(s)	344, 640
BglII	AGATCT	1 cut(s)	697
BlpI	GCTNAGC	1 cut(s)	518
Bme1390I	CCNGG	4 cut(s)	514, 609, 763, 1010
Bme18I	GGWCC	2 cut(s)	223, 652
BmgT120I	GGNCC	6 cut(s)	113, 223, 577, 652, 725, 1465
BmiI	GGNNCC	7 cut(s)	115, 225, 239, 386, 760, 1395, 1488
BmrFI	CCNGG	4 cut(s)	514, 609, 763, 1010
BmsI	GCATC	4 cut(s)	877, 909, 1285, 1468
BpiI	GAAGAC	1 cut(s)	1434
BpmI	CTGGAG	1 cut(s)	1107
Bpu1102I	GCTNAGC	1 cut(s)	518
Bpu14I	TTCGAA	2 cut(s)	7, 258
BpuEI	CTTGAG	1 cut(s)	879
BpuMI	CCSGG	1 cut(s)	514
Bsa29I	ATCGAT	1 cut(s)	1349
BsaBI	GATNNNNATC	1 cut(s)	702
BsaHI	GRCGYC	1 cut(s)	385
BsaJI	CCNNGG	2 cut(s)	580, 608
Bsc4I	CCNNNNNNNGG	3 cut(s)	1066, 1224, 1403
Bse118I	RCCGGY	2 cut(s)	456, 470
Bse1I	ACTGG	3 cut(s)	734, 757, 1299
Bse21I	CCTNAGG	1 cut(s)	858
Bse3DI	GCAATG	2 cut(s)	738, 1178
Bse8I	GATNNNNATC	1 cut(s)	702
BseBI	CCWGG	3 cut(s)	609, 763, 1010
BseCI	ATCGAT	1 cut(s)	1349
BseDI	CCNNGG	2 cut(s)	580, 608
BseGI	GGATG	3 cut(s)	137, 422, 892
BseJI	GATNNNNATC	1 cut(s)	702
BseLI	CCNNNNNNNGG	3 cut(s)	1066, 1224, 1403
BseMI	GCAATG	2 cut(s)	738, 1178
BseMII	CTCAG	4 cut(s)	207, 509, 872, 1503
BseNI	ACTGG	3 cut(s)	734, 757, 1299
BseRI	GAGGAG	3 cut(s)	230, 233, 455
BseSI	GKGCMC	1 cut(s)	982
BseXI	GCAGC	4 cut(s)	359, 362, 436, 1219
BseYI	CCCAGC	1 cut(s)	141
Bsh1236I	CGCG	1 cut(s)	278
Bsh1285I	CGRYCG	1 cut(s)	457
BshFI	GGCC	7 cut(s)	114, 275, 395, 578, 727, 1134, 1466
BshNI	GGYRCC	1 cut(s)	384
BshVI	ATCGAT	1 cut(s)	1349
BsiEI	CGRYCG	1 cut(s)	457
BsiHKAI	GWGCWC	3 cut(s)	486, 982, 1043
BsiSI	CCGG	4 cut(s)	388, 457, 471, 514
BslFI	GGGAC	1 cut(s)	978
BslI	CCNNNNNNNGG	3 cut(s)	1066, 1224, 1403
BsmAI	GTCTC	2 cut(s)	491, 813
BsmBI	CGTCTC	1 cut(s)	491
BsmFI	GGGAC	1 cut(s)	978
BsmI	GAATGC	1 cut(s)	1174
BsnI	GGCC	7 cut(s)	114, 275, 395, 578, 727, 1134, 1466
Bsp119I	TTCGAA	2 cut(s)	7, 258
Bsp1286I	GDGCHC	3 cut(s)	486, 982, 1043
Bsp143I	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
Bsp1720I	GCTNAGC	1 cut(s)	518
BspANI	GGCC	7 cut(s)	114, 275, 395, 578, 727, 1134, 1466
BspCNI	CTCAG	4 cut(s)	208, 510, 871, 1504
BspDI	ATCGAT	1 cut(s)	1349
BspFNI	CGCG	1 cut(s)	278
BspHI	TCATGA	2 cut(s)	1203, 1447
BspLI	GGNNCC	7 cut(s)	115, 225, 239, 386, 760, 1395, 1488
BspMAI	CTGCAG	1 cut(s)	1276
BspMI	ACCTGC	2 cut(s)	344, 640
BspPI	GGATC	3 cut(s)	935, 1388, 1401
BspT104I	TTCGAA	2 cut(s)	7, 258
BspT107I	GGYRCC	1 cut(s)	384
BsrDI	GCAATG	2 cut(s)	738, 1178
BsrFI	RCCGGY	2 cut(s)	456, 470
BsrI	ACTGG	3 cut(s)	734, 757, 1299
BssAI	RCCGGY	2 cut(s)	456, 470
BssECI	CCNNGG	2 cut(s)	580, 608
BssMI	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
BssNI	GRCGYC	1 cut(s)	385
Bst2UI	CCWGG	3 cut(s)	609, 763, 1010
Bst4CI	ACNGT	3 cut(s)	807, 1127, 1142
Bst6I	CTCTTC	1 cut(s)	1326
BstACI	GRCGYC	1 cut(s)	385
BstAPI	GCANNNNNTGC	2 cut(s)	359, 1180
BstBI	TTCGAA	2 cut(s)	7, 258
BstC8I	GCNNGC	6 cut(s)	310, 397, 472, 486, 835, 994
BstDEI	CTNAG	5 cut(s)	216, 518, 858, 1432, 1512
BstF5I	GGATG	3 cut(s)	137, 422, 892
BstFNI	CGCG	1 cut(s)	278
BstH2I	RGCGCY	3 cut(s)	388, 450, 1504
BstHHI	GCGC	4 cut(s)	280, 387, 449, 1503
BstKTI	GATC	7 cut(s)	510, 679, 700, 943, 1117, 1396, 1417
BstMAI	GTCTC	2 cut(s)	491, 813
BstMBI	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
BstMCI	CGRYCG	1 cut(s)	457
BstMWI	GCNNNNNNNGC	9 cut(s)	133, 142, 286, 344, 347, 350, 359, 1180, 1478
BstNI	CCWGG	3 cut(s)	609, 763, 1010
BstNSI	RCATGY	2 cut(s)	837, 996
BstSCI	CCNGG	4 cut(s)	512, 607, 761, 1008
BstSFI	CTRYAG	2 cut(s)	553, 1272
BstSLI	GKGCMC	1 cut(s)	982
BstUI	CGCG	1 cut(s)	278
BstV1I	GCAGC	4 cut(s)	359, 362, 436, 1219
BstV2I	GAAGAC	1 cut(s)	1434
BstX2I	RGATCY	2 cut(s)	697, 1393
BstYI	RGATCY	2 cut(s)	697, 1393
Bsu15I	ATCGAT	1 cut(s)	1349
Bsu36I	CCTNAGG	1 cut(s)	858
BsuRI	GGCC	7 cut(s)	114, 275, 395, 578, 727, 1134, 1466
BsuTUI	ATCGAT	1 cut(s)	1349
BtgZI	GCGATG	1 cut(s)	489
BtsCI	GGATG	3 cut(s)	137, 422, 892
BtsI	GCAGTG	1 cut(s)	1488
BtsIMutI	CAGTG	3 cut(s)	192, 877, 1488
BveI	ACCTGC	2 cut(s)	344, 640
Cac8I	GCNNGC	6 cut(s)	310, 397, 472, 486, 835, 994
CaiI	CAGNNNCTG	1 cut(s)	359
CciI	TCATGA	2 cut(s)	1203, 1447
CfoI	GCGC	4 cut(s)	280, 387, 449, 1503
Cfr10I	RCCGGY	2 cut(s)	456, 470
Cfr13I	GGNCC	6 cut(s)	113, 223, 577, 652, 725, 1465
ClaI	ATCGAT	1 cut(s)	1349
Csp6I	GTAC	6 cut(s)	502, 864, 881, 1093, 1269, 1508
CviAII	CATG	7 cut(s)	783, 834, 993, 1204, 1265, 1448, 1519
CviQI	GTAC	6 cut(s)	502, 864, 881, 1093, 1269, 1508
DdeI	CTNAG	5 cut(s)	216, 518, 858, 1432, 1512
DinI	GGCGCC	1 cut(s)	386
DpnI	GATC	7 cut(s)	509, 678, 699, 942, 1116, 1395, 1416
DpnII	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
EaeI	YGGCCR	1 cut(s)	393
Eam1104I	CTCTTC	1 cut(s)	1326
EarI	CTCTTC	1 cut(s)	1326
EciI	GGCGGA	1 cut(s)	1422
Eco147I	AGGCCT	1 cut(s)	1134
Eco47I	GGWCC	2 cut(s)	223, 652
Eco57I	CTGAAG	2 cut(s)	1218, 1373
Eco81I	CCTNAGG	1 cut(s)	858
EcoO109I	RGGNCCY	2 cut(s)	223, 1465
EcoRII	CCWGG	3 cut(s)	607, 761, 1008
EcoT22I	ATGCAT	1 cut(s)	839
EgeI	GGCGCC	1 cut(s)	386
EheI	GGCGCC	1 cut(s)	386
Esp3I	CGTCTC	1 cut(s)	491
FaeI	CATG	7 cut(s)	786, 837, 996, 1207, 1268, 1451, 1522
FalI	AAGNNNNNCTT	2 cut(s)	1058, 1090
FaqI	GGGAC	1 cut(s)	978
FatI	CATG	7 cut(s)	782, 833, 992, 1203, 1264, 1447, 1518
FauI	CCCGC	1 cut(s)	193
FbaI	TGATCA	1 cut(s)	507
FokI	GGATG	3 cut(s)	124, 409, 899
FspBI	CTAG	3 cut(s)	206, 695, 1552
GlaI	GCGC	4 cut(s)	279, 386, 448, 1502
GsaI	CCCAGC	1 cut(s)	145
GsuI	CTGGAG	1 cut(s)	1107
HaeII	RGCGCY	3 cut(s)	388, 450, 1504
HaeIII	GGCC	7 cut(s)	114, 275, 395, 578, 727, 1134, 1466
HapII	CCGG	4 cut(s)	388, 457, 471, 514
HhaI	GCGC	4 cut(s)	280, 387, 449, 1503
Hin1I	GRCGYC	1 cut(s)	385
Hin1II	CATG	7 cut(s)	786, 837, 996, 1207, 1268, 1451, 1522
Hin6I	GCGC	4 cut(s)	278, 385, 447, 1501
HinP1I	GCGC	4 cut(s)	278, 385, 447, 1501
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HindIII	AAGCTT	1 cut(s)	527
HinfI	GANTC	8 cut(s)	24, 105, 1207, 1214, 1327, 1346, 1351, 1457
HpaII	CCGG	4 cut(s)	388, 457, 471, 514
HphI	GGTGA	4 cut(s)	82, 502, 1040, 1466
Hpy166II	GTNNAC	2 cut(s)	980, 1006
Hpy188I	TCNGA	9 cut(s)	41, 217, 439, 721, 814, 1294, 1326, 1419, 1462
Hpy188III	TCNNGA	8 cut(s)	21, 944, 1086, 1196, 1204, 1211, 1391, 1448
Hpy8I	GTNNAC	2 cut(s)	980, 1006
Hpy99I	CGWCG	1 cut(s)	421
HpyAV	CCTTC	5 cut(s)	302, 1025, 1160, 1355, 1445
HpyCH4III	ACNGT	3 cut(s)	807, 1127, 1142
HpyCH4IV	ACGT	2 cut(s)	500, 1186
HpyCH4V	TGCA	8 cut(s)	743, 837, 980, 992, 1183, 1274, 1313, 1481
HpyF10VI	GCNNNNNNNGC	9 cut(s)	133, 142, 286, 344, 347, 350, 359, 1180, 1478
HpyF3I	CTNAG	5 cut(s)	216, 518, 858, 1432, 1512
HpySE526I	ACGT	2 cut(s)	500, 1186
Hsp92I	GRCGYC	1 cut(s)	385
Hsp92II	CATG	7 cut(s)	786, 837, 996, 1207, 1268, 1451, 1522
HspAI	GCGC	4 cut(s)	278, 385, 447, 1501
KasI	GGCGCC	1 cut(s)	384
KroI	GCCGGC	1 cut(s)	470
KroNI	GCCGGC	1 cut(s)	472
Ksp22I	TGATCA	1 cut(s)	507
Kzo9I	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
LmnI	GCTCC	6 cut(s)	243, 481, 758, 1021, 1171, 1492
Lsp1109I	GCAGC	4 cut(s)	359, 362, 436, 1219
LweI	GCATC	4 cut(s)	877, 909, 1285, 1468
MaeI	CTAG	3 cut(s)	206, 695, 1552
MaeII	ACGT	2 cut(s)	500, 1186
MaeIII	GTNAC	2 cut(s)	748, 773
MalI	GATC	7 cut(s)	509, 678, 699, 942, 1116, 1395, 1416
MboI	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
MboII	GAAGA	8 cut(s)	168, 272, 278, 287, 631, 1313, 1379, 1439
MfeI	CAATTG	1 cut(s)	999
MflI	RGATCY	2 cut(s)	697, 1393
MhlI	GDGCHC	3 cut(s)	486, 982, 1043
MluCI	AATT	9 cut(s)	15, 78, 427, 715, 850, 999, 1096, 1105, 1306
Mly113I	GGCGCC	1 cut(s)	385
MlyI	GAGTC	2 cut(s)	1208, 1336
Mph1103I	ATGCAT	1 cut(s)	839
MreI	CGCCGGCG	1 cut(s)	470
MroNI	GCCGGC	1 cut(s)	470
MroXI	GAANNNNTTC	3 cut(s)	78, 1320, 1350
MseI	TTAA	1 cut(s)	1104
MslI	CAYNNNNRTG	4 cut(s)	827, 910, 987, 1452
MspA1I	CMGCKG	1 cut(s)	974
MspI	CCGG	4 cut(s)	388, 457, 471, 514
MspR9I	CCNGG	4 cut(s)	514, 609, 763, 1010
MunI	CAATTG	1 cut(s)	999
Mva1269I	GAATGC	1 cut(s)	1174
MvaI	CCWGG	3 cut(s)	609, 763, 1010
MvnI	CGCG	1 cut(s)	278
MwoI	GCNNNNNNNGC	9 cut(s)	133, 142, 286, 344, 347, 350, 359, 1180, 1478
NaeI	GCCGGC	1 cut(s)	472
NarI	GGCGCC	1 cut(s)	385
NciI	CCSGG	1 cut(s)	514
NdeII	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
NgoMIV	GCCGGC	1 cut(s)	470
NlaIII	CATG	7 cut(s)	786, 837, 996, 1207, 1268, 1451, 1522
NlaIV	GGNNCC	7 cut(s)	115, 225, 239, 386, 760, 1395, 1488
NmeAIII	GCCGAG	1 cut(s)	520
NsiI	ATGCAT	1 cut(s)	839
NspI	RCATGY	2 cut(s)	837, 996
NspV	TTCGAA	2 cut(s)	7, 258
PaeI	GCATGC	2 cut(s)	837, 996
PagI	TCATGA	2 cut(s)	1203, 1447
PceI	AGGCCT	1 cut(s)	1134
PcsI	WCGNNNNNNNCGW	2 cut(s)	413, 492
PctI	GAATGC	1 cut(s)	1174
PdiI	GCCGGC	1 cut(s)	472
PdmI	GAANNNNTTC	3 cut(s)	78, 1320, 1350
PfeI	GAWTC	6 cut(s)	24, 105, 1207, 1346, 1351, 1457
PleI	GAGTC	2 cut(s)	1208, 1335
PluTI	GGCGCC	1 cut(s)	388
PpsI	GAGTC	2 cut(s)	1208, 1335
PpuMI	RGGWCCY	1 cut(s)	223
Psp1406I	AACGTT	1 cut(s)	1186
Psp5II	RGGWCCY	1 cut(s)	223
Psp6I	CCWGG	3 cut(s)	607, 761, 1008
PspFI	CCCAGC	1 cut(s)	141
PspGI	CCWGG	3 cut(s)	607, 761, 1008
PspN4I	GGNNCC	7 cut(s)	115, 225, 239, 386, 760, 1395, 1488
PspPI	GGNCC	6 cut(s)	113, 223, 577, 652, 725, 1465
PspPPI	RGGWCCY	1 cut(s)	223
PstI	CTGCAG	1 cut(s)	1276
PstNI	CAGNNNCTG	1 cut(s)	359
PsuI	RGATCY	2 cut(s)	697, 1393
PvuII	CAGCTG	1 cut(s)	974
RsaI	GTAC	6 cut(s)	503, 865, 882, 1094, 1270, 1509
RsaNI	GTAC	6 cut(s)	502, 864, 881, 1093, 1269, 1508
RseI	CAYNNNNRTG	4 cut(s)	827, 910, 987, 1452
SaqAI	TTAA	1 cut(s)	1104
Sau3AI	GATC	7 cut(s)	507, 676, 697, 940, 1114, 1393, 1414
Sau96I	GGNCC	6 cut(s)	113, 223, 577, 652, 725, 1465
SchI	GAGTC	2 cut(s)	1208, 1336
ScrFI	CCNGG	4 cut(s)	514, 609, 763, 1010
SduI	GDGCHC	3 cut(s)	486, 982, 1043
SfaNI	GCATC	4 cut(s)	877, 909, 1285, 1468
SfcI	CTRYAG	2 cut(s)	553, 1272
SfoI	GGCGCC	1 cut(s)	386
SfuI	TTCGAA	2 cut(s)	7, 258
SgrAI	CRCCGGYG	1 cut(s)	470
SinI	GGWCC	2 cut(s)	223, 652
SmiMI	CAYNNNNRTG	4 cut(s)	827, 910, 987, 1452
SmlI	CTYRAG	1 cut(s)	894
SmoI	CTYRAG	1 cut(s)	894
SpeI	ACTAGT	1 cut(s)	205
SphI	GCATGC	2 cut(s)	837, 996
Sse9I	AATT	9 cut(s)	15, 78, 427, 715, 850, 999, 1096, 1105, 1306
SseBI	AGGCCT	1 cut(s)	1134
SspDI	GGCGCC	1 cut(s)	384
SspI	AATATT	1 cut(s)	1149
SspMI	CTAG	3 cut(s)	206, 695, 1552
StuI	AGGCCT	1 cut(s)	1134
StyD4I	CCNGG	4 cut(s)	512, 607, 761, 1008
TaaI	ACNGT	3 cut(s)	807, 1127, 1142
TaiI	ACGT	2 cut(s)	503, 1189
TaqI	TCGA	5 cut(s)	7, 103, 258, 1129, 1349
TasI	AATT	9 cut(s)	15, 78, 427, 715, 850, 999, 1096, 1105, 1306
TauI	GCSGC	8 cut(s)	278, 341, 344, 347, 382, 385, 491, 494
TfiI	GAWTC	6 cut(s)	24, 105, 1207, 1346, 1351, 1457
Tru1I	TTAA	1 cut(s)	1104
Tru9I	TTAA	1 cut(s)	1104
TscAI	CASTG	3 cut(s)	199, 877, 1488
TseI	GCWGC	4 cut(s)	347, 350, 449, 1232
TspDTI	ATGAA	7 cut(s)	279, 1167, 1253, 1374, 1436, 1464, 1507
TspRI	CASTG	3 cut(s)	199, 877, 1488
VneI	GTGCAC	1 cut(s)	978
VpaK11BI	GGWCC	2 cut(s)	223, 652
XapI	RAATTY	3 cut(s)	715, 850, 1306
XceI	RCATGY	2 cut(s)	837, 996
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1480
XmnI	GAANNNNTTC	3 cut(s)	78, 1320, 1350
XspI	CTAG	3 cut(s)	206, 695, 1552
Zsp2I	ATGCAT	1 cut(s)	839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.