Rorug05G0080300

Uncharacterized conserved protein (DUF2358)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0013249
Physical Location & Seq
Forward (+)
6966305 .. 6967695
1391 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0080300.1

Sequence Viewer

Length: 963 bp
ATGCCGGTTTTCAAAACCCCATTCAACGGCTACTCCGTCAAGTTCAGCCCCTTCTACGAGTCCCGCCTCGCCGTCGCCACCTCCCAAAACTTCGGCATCCTCGGCAACGGCCGCCTCCACGTCATCGACCTCTCCCCCGCCGCCCCGGGCCCCACCCCCATCACCGAGCTCGTCTCCTTCGACACCGCCGACGGCGTCTACGACGTCGCCTGGTCCGAGTCCCACGACTCCCTCCTCGTCGCCGCCATCGCCGACGGCTCCGTCAAGCTCTACGACCTCGCCCTCCCGCCCACCTCCAACCCCCTCCGCTCCCTCCACGAGCACACGCGCGAGGTCAGCTCCGCCGACTACAACCCCACGCGCCGCGACTCGTTCCTCACCGCCTCCTGGGACGACACCGTCAAGCTCTGGACCGTCGACCGCCCCGCCTCCGTCCGCACCTTCAAGGAGCACGCCTACTGCGTCTACTCCGCCGTCTGGAACCCCCGCCACGCCGACGTCTTCGCCTCCGCCTCCGGCGACTGCACCGCACGCGTCTGGGACGTGCGTGAGCCCGGATCCACCATGATCATCCCGGCGCACGAGTTTGAGATCCTCTCCTGCGATTGGAACAAGTACGACGACTGCGTCATCGCCACCGCCTCCGTCGACAAATCGATCAAGGTCTGGGACGTCAGGTCCATCCGGGCTCCGATCTCGGTCCTCAACGGCCACGGCTACGCCGTCAGGAAAGTCAAATTCTCGCCGCACCGGCAGAGCCTGATGATGTCGTGCTCGTACGACATGTCGGTTTGCCTGTGGGATTACATGGTGGAGGATGCGCTGGTGGGGCGGTACGACCACCACTCGGAGTTCGCCGTCGGAATCGATATGAGCGTTTTGGTGGAGGGACTTCTTGCCAGCACCGGTTGGGATGAGCTTGTCTATGTTTGGCAGCACGGTACTGACCCCAGAGCGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2358

Protein Analysis

320

Amino Acids

35.63

Weight (kDa)

5.3

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_EIPR1 PF23609 55 - 137 2.6e-07 EIPR1 beta-propeller
WDR55 PF24796 62 - 227 1.3e-09 WDR55
WD40_Prp19 PF24814 62 - 184 4.3e-13 Prp19 WD40 domain
WD40_CDC20-Fz PF24807 62 - 183 4.8e-11 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 63 - 183 1.5e-18 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 66 - 225 5.9e-18 WDR3 first beta-propeller domain
Beta-prop_Aladin PF25460 69 - 227 5.9e-06 Aladin seven-bladed propeller
Beta-prop_WDR3_2nd PF25172 74 - 181 2.8e-06 WDR3 second beta-propeller domain
WD40_Gbeta PF25391 103 - 311 7.3e-11 G protein beta WD-40 repeat protein
Beta-prop_THOC3 PF25174 108 - 312 3.8e-25 THOC3 beta-propeller domain
Beta-prop_WDR5 PF25175 125 - 312 1.8e-28 WDR5 beta-propeller domain
WD40_CDC20-Fz PF24807 131 - 282 1.5e-17 CDC20/Fizzy WD40 domain
Beta-prop_EIPR1 PF23609 154 - 267 4.3e-15 EIPR1 beta-propeller
Beta-prop_EML_2 PF23414 163 - 309 6.6e-09 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd PF25047 166 - 313 1e-10 TEP-1 second beta-propeller
WD40_MABP1-WDR62_2nd PF24782 170 - 273 1.1e-10 MABP1/WDR62 second WD40 domain
Beta-prop_WDR3_2nd PF25172 194 - 316 2.2e-07 WDR3 second beta-propeller domain
WD40_Prp19 PF24814 197 - 285 1.2e-09 Prp19 WD40 domain
Beta-prop_WDR3_1st PF25173 207 - 313 1.5e-12 WDR3 first beta-propeller domain
WD40 PF00400 231 - 268 1e-06 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013249)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79510 AT1G79510
fragaria_vesca FvH4_3g14540
malus_domestica MD05G1235700.v1.1 MD10G1212200.v1.1
prunus_persica Prupe.4G130800_v2.0.a1
pyrus_communis pycom05g21250 pycom10g17980
rosa_chinensis RchiOBHm_Chr5g0023911
rosa_laevigata RLG00000032748
rosa_multiflora Rmu_sc0004175.1_g000013
rosa_roxburghii Rroxscaffold_1G00055300
rosa_rugosa Rorug05G0080300
rosa_samantha Rh5AG170600 Rh5BG167700 Rh5CG183200 Rh5DG169800
rosa_wichuraiana Rw5G015430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 260, 398, 626
AatII GACGTC 3 cut(s) 207, 501, 675
AccBSI CCGCTC 1 cut(s) 309
AccI GTMKAC 4 cut(s) 198, 417, 465, 648
AccII CGCG 5 cut(s) 328, 330, 361, 366, 534
AclWI GGATC 3 cut(s) 552, 565, 586
AcoI YGGCCR 2 cut(s) 109, 709
AcsI RAATTY 1 cut(s) 737
AcyI GRCGYC 4 cut(s) 195, 204, 498, 672
AfaI GTAC 4 cut(s) 617, 779, 836, 943
AfiI CCNNNNNNNGG 5 cut(s) 26, 387, 477, 606, 847
AflIII ACRYGT 2 cut(s) 532, 783
AgeI ACCGGT 1 cut(s) 905
AgsI TTSAA 3 cut(s) 13, 25, 445
AhdI GACNNNNNGTC 1 cut(s) 676
AjiI CACGTC 2 cut(s) 121, 544
AjnI CCWGG 2 cut(s) 209, 386
AluBI AGCT 5 cut(s) 169, 268, 339, 406, 919
AluI AGCT 5 cut(s) 169, 268, 339, 406, 919
Alw21I GWGCWC 4 cut(s) 171, 324, 453, 776
Alw26I GTCTC 1 cut(s) 178
AlwI GGATC 3 cut(s) 552, 565, 586
AlwNI CAGNNNCTG 1 cut(s) 760
Ama87I CYCGRG 1 cut(s) 145
AoxI GGCC 3 cut(s) 109, 148, 709
ApaI GGGCCC 1 cut(s) 152
ApeKI GCWGC 1 cut(s) 934
ApoI RAATTY 1 cut(s) 737
AsiGI ACCGGT 1 cut(s) 905
AspLEI GCGC 5 cut(s) 330, 363, 580, 823, 958
AspS9I GGNCC 6 cut(s) 148, 149, 213, 411, 678, 700
AsuC2I CCSGG 5 cut(s) 146, 147, 555, 575, 686
AsuHPI GGTGA 2 cut(s) 154, 370
AvaI CYCGRG 1 cut(s) 145
AvaII GGWCC 4 cut(s) 213, 411, 678, 700
BaeGI GKGCMC 1 cut(s) 152
BamHI GGATCC 1 cut(s) 557
BanII GRGCYC 4 cut(s) 152, 171, 555, 691
BauI CACGAG 2 cut(s) 317, 581
BbsI GAAGAC 1 cut(s) 493
Bbv12I GWGCWC 4 cut(s) 171, 324, 453, 776
BbvI GCAGC 1 cut(s) 946
BccI CCATC 3 cut(s) 167, 254, 689
BciT130I CCWGG 2 cut(s) 211, 388
BclI TGATCA 1 cut(s) 567
BcnI CCSGG 5 cut(s) 146, 147, 555, 575, 686
BcoDI GTCTC 1 cut(s) 178
BfoI RGCGCY 1 cut(s) 959
BglI GCCNNNNNGGC 1 cut(s) 751
BisI GCNGC 6 cut(s) 112, 141, 243, 364, 746, 935
BlsI GCNGC 6 cut(s) 113, 142, 244, 365, 747, 936
Bme1390I CCNGG 7 cut(s) 146, 147, 211, 388, 555, 575, 686
Bme18I GGWCC 4 cut(s) 213, 411, 678, 700
BmeRI GACNNNNNGTC 1 cut(s) 676
BmeT110I CYCGRG 1 cut(s) 145
BmgBI CACGTC 2 cut(s) 121, 544
BmgT120I GGNCC 6 cut(s) 148, 149, 213, 411, 678, 700
BmiI GGNNCC 6 cut(s) 150, 151, 259, 482, 559, 690
BmrFI CCNGG 7 cut(s) 146, 147, 211, 388, 555, 575, 686
BmsI GCATC 2 cut(s) 105, 808
BpiI GAAGAC 1 cut(s) 493
BplI GAGNNNNNCTC 6 cut(s) 158, 190, 323, 355, 581, 613
BpuMI CCSGG 5 cut(s) 146, 147, 555, 575, 686
Bsa29I ATCGAT 2 cut(s) 656, 867
BsaHI GRCGYC 4 cut(s) 195, 204, 498, 672
BsaJI CCNNGG 5 cut(s) 100, 144, 145, 387, 712
BsaWI WCCGGW 1 cut(s) 905
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bsc4I CCNNNNNNNGG 5 cut(s) 26, 387, 477, 606, 847
Bse118I RCCGGY 3 cut(s) 4, 750, 905
BseBI CCWGG 2 cut(s) 211, 388
BseCI ATCGAT 2 cut(s) 656, 867
BseDI CCNNGG 5 cut(s) 100, 144, 145, 387, 712
BseGI GGATG 5 cut(s) 96, 570, 681, 823, 919
BseLI CCNNNNNNNGG 5 cut(s) 26, 387, 477, 606, 847
BseRI GAGGAG 1 cut(s) 224
BseSI GKGCMC 1 cut(s) 152
BseX3I CGGCCG 1 cut(s) 109
BseXI GCAGC 1 cut(s) 946
BsgI GTGCAG 1 cut(s) 508
Bsh1236I CGCG 5 cut(s) 328, 330, 361, 366, 534
Bsh1285I CGRYCG 2 cut(s) 112, 421
BshFI GGCC 3 cut(s) 111, 150, 711
BshTI ACCGGT 1 cut(s) 905
BshVI ATCGAT 2 cut(s) 656, 867
BsiEI CGRYCG 2 cut(s) 112, 421
BsiHKAI GWGCWC 4 cut(s) 171, 324, 453, 776
BsiHKCI CYCGRG 1 cut(s) 145
BsiSI CCGG 8 cut(s) 5, 146, 516, 555, 575, 685, 751, 906
BsiWI CGTACG 1 cut(s) 777
BslFI GGGAC 6 cut(s) 46, 205, 404, 554, 683, 903
BslI CCNNNNNNNGG 5 cut(s) 26, 387, 477, 606, 847
BsmAI GTCTC 1 cut(s) 178
BsmBI CGTCTC 1 cut(s) 178
BsmFI GGGAC 6 cut(s) 46, 205, 404, 554, 683, 903
BsnI GGCC 3 cut(s) 111, 150, 711
BsoBI CYCGRG 1 cut(s) 145
Bsp120I GGGCCC 1 cut(s) 148
Bsp1286I GDGCHC 7 cut(s) 152, 171, 324, 453, 555, 691, 776
Bsp143I GATC 5 cut(s) 557, 567, 591, 657, 693
BspANI GGCC 3 cut(s) 111, 150, 711
BspDI ATCGAT 2 cut(s) 656, 867
BspFNI CGCG 5 cut(s) 328, 330, 361, 366, 534
BspLI GGNNCC 6 cut(s) 150, 151, 259, 482, 559, 690
BspPI GGATC 3 cut(s) 552, 565, 586
BsrBI CCGCTC 1 cut(s) 309
BsrFI RCCGGY 3 cut(s) 4, 750, 905
BssAI RCCGGY 3 cut(s) 4, 750, 905
BssECI CCNNGG 5 cut(s) 100, 144, 145, 387, 712
BssMI GATC 5 cut(s) 557, 567, 591, 657, 693
BssNI GRCGYC 4 cut(s) 195, 204, 498, 672
BssSI CACGAG 2 cut(s) 317, 581
Bst2BI CACGAG 2 cut(s) 317, 581
Bst2UI CCWGG 2 cut(s) 211, 388
Bst4CI ACNGT 3 cut(s) 400, 415, 941
BstACI GRCGYC 4 cut(s) 195, 204, 498, 672
BstC8I GCNNGC 3 cut(s) 453, 532, 901
BstDSI CCRYGG 1 cut(s) 712
BstF5I GGATG 5 cut(s) 96, 570, 681, 823, 919
BstFNI CGCG 5 cut(s) 328, 330, 361, 366, 534
BstH2I RGCGCY 1 cut(s) 959
BstHHI GCGC 5 cut(s) 330, 363, 580, 823, 958
BstKTI GATC 5 cut(s) 560, 570, 594, 660, 696
BstMAI GTCTC 1 cut(s) 178
BstMBI GATC 5 cut(s) 557, 567, 591, 657, 693
BstMCI CGRYCG 2 cut(s) 112, 421
BstMWI GCNNNNNNNGC 7 cut(s) 102, 111, 248, 336, 531, 751, 829
BstNI CCWGG 2 cut(s) 211, 388
BstNSI RCATGY 1 cut(s) 787
BstSCI CCNGG 7 cut(s) 144, 145, 209, 386, 553, 573, 684
BstSLI GKGCMC 1 cut(s) 152
BstUI CGCG 5 cut(s) 328, 330, 361, 366, 534
BstV1I GCAGC 1 cut(s) 946
BstV2I GAAGAC 1 cut(s) 493
BstX2I RGATCY 2 cut(s) 557, 591
BstYI RGATCY 2 cut(s) 557, 591
BstZI CGGCCG 1 cut(s) 109
Bsu15I ATCGAT 2 cut(s) 656, 867
BsuRI GGCC 3 cut(s) 111, 150, 711
BsuTUI ATCGAT 2 cut(s) 656, 867
BtgI CCRYGG 1 cut(s) 712
BtgZI GCGATG 2 cut(s) 232, 616
BtrI CACGTC 2 cut(s) 121, 544
BtsCI GGATG 5 cut(s) 96, 570, 681, 823, 919
Cac8I GCNNGC 3 cut(s) 453, 532, 901
CaiI CAGNNNCTG 1 cut(s) 760
CfoI GCGC 5 cut(s) 330, 363, 580, 823, 958
Cfr10I RCCGGY 3 cut(s) 4, 750, 905
Cfr13I GGNCC 6 cut(s) 148, 149, 213, 411, 678, 700
Cfr9I CCCGGG 1 cut(s) 145
ClaI ATCGAT 2 cut(s) 656, 867
CseI GACGC 4 cut(s) 184, 451, 523, 616
Csp6I GTAC 4 cut(s) 616, 778, 835, 942
CspAI ACCGGT 1 cut(s) 905
CviAII CATG 3 cut(s) 565, 784, 808
CviQI GTAC 4 cut(s) 616, 778, 835, 942
DpnI GATC 5 cut(s) 559, 569, 593, 659, 695
DpnII GATC 5 cut(s) 557, 567, 591, 657, 693
DrdI GACNNNNNNGTC 3 cut(s) 260, 398, 626
DriI GACNNNNNGTC 1 cut(s) 676
DseDI GACNNNNNNGTC 3 cut(s) 260, 398, 626
EaeI YGGCCR 2 cut(s) 109, 709
EagI CGGCCG 1 cut(s) 109
Eam1105I GACNNNNNGTC 1 cut(s) 676
EciI GGCGGA 3 cut(s) 331, 460, 499
Ecl136II GAGCTC 1 cut(s) 169
EclXI CGGCCG 1 cut(s) 109
Eco24I GRGCYC 4 cut(s) 152, 171, 555, 691
Eco47I GGWCC 4 cut(s) 213, 411, 678, 700
Eco52I CGGCCG 1 cut(s) 109
Eco53kI GAGCTC 1 cut(s) 169
Eco88I CYCGRG 1 cut(s) 145
EcoICRI GAGCTC 1 cut(s) 169
EcoO109I RGGNCCY 1 cut(s) 149
EcoRII CCWGG 2 cut(s) 209, 386
EcoT38I GRGCYC 4 cut(s) 152, 171, 555, 691
Esp3I CGTCTC 1 cut(s) 178
FaeI CATG 3 cut(s) 568, 787, 811
FaiI YATR 5 cut(s) 566, 785, 809, 872, 927
FaqI GGGAC 6 cut(s) 46, 205, 404, 554, 683, 903
FatI CATG 3 cut(s) 564, 783, 807
FauI CCCGC 5 cut(s) 71, 145, 294, 433, 494
FbaI TGATCA 1 cut(s) 567
FblI GTMKAC 4 cut(s) 198, 417, 465, 648
Fnu4HI GCNGC 6 cut(s) 112, 141, 243, 364, 746, 935
FokI GGATG 5 cut(s) 83, 557, 668, 830, 926
FriOI GRGCYC 4 cut(s) 152, 171, 555, 691
Fsp4HI GCNGC 6 cut(s) 112, 141, 243, 364, 746, 935
GlaI GCGC 5 cut(s) 329, 362, 579, 822, 957
GluI GCNGC 6 cut(s) 112, 141, 243, 364, 746, 935
HaeII RGCGCY 1 cut(s) 959
HaeIII GGCC 3 cut(s) 111, 150, 711
HapII CCGG 8 cut(s) 5, 146, 516, 555, 575, 685, 751, 906
HgaI GACGC 4 cut(s) 184, 451, 523, 616
HhaI GCGC 5 cut(s) 330, 363, 580, 823, 958
Hin1I GRCGYC 4 cut(s) 195, 204, 498, 672
Hin1II CATG 3 cut(s) 568, 787, 811
Hin6I GCGC 5 cut(s) 328, 361, 578, 821, 956
HinP1I GCGC 5 cut(s) 328, 361, 578, 821, 956
HincII GTYRAC 2 cut(s) 418, 649
HindII GTYRAC 2 cut(s) 418, 649
HinfI GANTC 5 cut(s) 59, 218, 227, 368, 864
HpaII CCGG 8 cut(s) 5, 146, 516, 555, 575, 685, 751, 906
HphI GGTGA 2 cut(s) 154, 370
Hpy166II GTNNAC 4 cut(s) 199, 418, 466, 649
Hpy188I TCNGA 4 cut(s) 217, 693, 850, 863
Hpy188III TCNNGA 3 cut(s) 409, 478, 727
Hpy8I GTNNAC 4 cut(s) 199, 418, 466, 649
HpyAV CCTTC 3 cut(s) 61, 187, 451
HpyCH4III ACNGT 3 cut(s) 400, 415, 941
HpyCH4IV ACGT 5 cut(s) 120, 204, 498, 543, 672
HpyCH4V TGCA 1 cut(s) 525
HpyF10VI GCNNNNNNNGC 7 cut(s) 102, 111, 248, 336, 531, 751, 829
HpySE526I ACGT 5 cut(s) 120, 204, 498, 543, 672
Hsp92I GRCGYC 4 cut(s) 195, 204, 498, 672
Hsp92II CATG 3 cut(s) 568, 787, 811
HspAI GCGC 5 cut(s) 328, 361, 578, 821, 956
Ksp22I TGATCA 1 cut(s) 567
Kzo9I GATC 5 cut(s) 557, 567, 591, 657, 693
LmnI GCTCC 5 cut(s) 263, 314, 344, 448, 694
Lsp1109I GCAGC 1 cut(s) 946
LweI GCATC 2 cut(s) 105, 808
MaeII ACGT 5 cut(s) 120, 204, 498, 543, 672
MalI GATC 5 cut(s) 559, 569, 593, 659, 695
MbiI CCGCTC 1 cut(s) 309
MboI GATC 5 cut(s) 557, 567, 591, 657, 693
MboII GAAGA 1 cut(s) 493
MflI RGATCY 2 cut(s) 557, 591
MhlI GDGCHC 7 cut(s) 152, 171, 324, 453, 555, 691, 776
MluCI AATT 1 cut(s) 737
MluI ACGCGT 1 cut(s) 532
MlyI GAGTC 4 cut(s) 68, 221, 227, 362
MmeI TCCRAC 2 cut(s) 321, 841
MspI CCGG 8 cut(s) 5, 146, 516, 555, 575, 685, 751, 906
MspR9I CCNGG 7 cut(s) 146, 147, 211, 388, 555, 575, 686
MvaI CCWGG 2 cut(s) 211, 388
MvnI CGCG 5 cut(s) 328, 330, 361, 366, 534
MwoI GCNNNNNNNGC 7 cut(s) 102, 111, 248, 336, 531, 751, 829
NciI CCSGG 5 cut(s) 146, 147, 555, 575, 686
NdeII GATC 5 cut(s) 557, 567, 591, 657, 693
NlaIII CATG 3 cut(s) 568, 787, 811
NlaIV GGNNCC 6 cut(s) 150, 151, 259, 482, 559, 690
NmeAIII GCCGAG 1 cut(s) 81
NspI RCATGY 1 cut(s) 787
PciI ACATGT 1 cut(s) 783
PcsI WCGNNNNNNNCGW 9 cut(s) 33, 177, 186, 198, 213, 459, 624, 720, 873
PfeI GAWTC 1 cut(s) 864
Pfl23II CGTACG 1 cut(s) 777
PflFI GACNNNGTC 3 cut(s) 194, 398, 626
PinAI ACCGGT 1 cut(s) 905
PkrI GCNGC 6 cut(s) 113, 142, 244, 365, 747, 936
PleI GAGTC 4 cut(s) 67, 221, 226, 362
PpsI GAGTC 4 cut(s) 67, 221, 226, 362
PscI ACATGT 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 171
Psp6I CCWGG 2 cut(s) 209, 386
PspGI CCWGG 2 cut(s) 209, 386
PspLI CGTACG 1 cut(s) 777
PspN4I GGNNCC 6 cut(s) 150, 151, 259, 482, 559, 690
PspOMI GGGCCC 1 cut(s) 148
PspPI GGNCC 6 cut(s) 148, 149, 213, 411, 678, 700
PstNI CAGNNNCTG 1 cut(s) 760
PsuI RGATCY 2 cut(s) 557, 591
PsyI GACNNNGTC 3 cut(s) 194, 398, 626
RsaI GTAC 4 cut(s) 617, 779, 836, 943
RsaNI GTAC 4 cut(s) 616, 778, 835, 942
SacI GAGCTC 1 cut(s) 171
SalI GTCGAC 2 cut(s) 416, 647
SatI GCNGC 6 cut(s) 112, 141, 243, 364, 746, 935
Sau3AI GATC 5 cut(s) 557, 567, 591, 657, 693
Sau96I GGNCC 6 cut(s) 148, 149, 213, 411, 678, 700
SchI GAGTC 4 cut(s) 68, 221, 227, 362
ScrFI CCNGG 7 cut(s) 146, 147, 211, 388, 555, 575, 686
SduI GDGCHC 7 cut(s) 152, 171, 324, 453, 555, 691, 776
SfaNI GCATC 2 cut(s) 105, 808
SinI GGWCC 4 cut(s) 213, 411, 678, 700
SmaI CCCGGG 1 cut(s) 147
Sse9I AATT 1 cut(s) 737
SstI GAGCTC 1 cut(s) 171
StyD4I CCNGG 7 cut(s) 144, 145, 209, 386, 553, 573, 684
TaaI ACNGT 3 cut(s) 400, 415, 941
TaiI ACGT 5 cut(s) 123, 207, 501, 546, 675
TaqI TCGA 6 cut(s) 126, 180, 417, 648, 656, 867
TaqII GACCGA 1 cut(s) 688
TasI AATT 1 cut(s) 737
TauI GCSGC 5 cut(s) 114, 143, 245, 366, 748
TfiI GAWTC 1 cut(s) 864
TseI GCWGC 1 cut(s) 934
TspGWI ACGGA 4 cut(s) 25, 250, 421, 634
TspMI CCCGGG 1 cut(s) 145
Tth111I GACNNNGTC 3 cut(s) 194, 398, 626
VpaK11BI GGWCC 4 cut(s) 213, 411, 678, 700
XapI RAATTY 1 cut(s) 737
XceI RCATGY 1 cut(s) 787
XmaI CCCGGG 1 cut(s) 145
XmiI GTMKAC 4 cut(s) 198, 417, 465, 648
ZraI GACGTC 3 cut(s) 205, 499, 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.