Rorug05G0141700

Metallothionein-like protein type 3-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0011138
Physical Location & Seq
Forward (+)
12942310 .. 12951271
8962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0141700.1

Sequence Viewer

Length: 2709 bp
ATGGGAGAAAGTATGAAACATATCAAAACTCCAAAAGTCCGTAATCTGGGTCCTGTGGAAATAGGTACGTGTCCCACGTCAGTTCTTCAGGGTCGAGTTTGTAAGTCTGCCTTGACGGGGAGATGTAGGGAAGCCTTCTTCTCTCCAAAACTTTTCCCCCGAAGCGAAACTGAGACAGTCACCGCCACCACCCAAACCACAGTGTTTGCCGCCGAAGCTGAGAACTTCGCCGCCGCCTTCGATTCATTTTTGGTTCTAAACAATCACACACACCTGCAGCAATGTAAGTCGTCGAGGATTTGCGTCAAGAATTTGCCGAAACACGTCGACGATAAGAAGCTCCGGGAGCTTTTCTCCGAGAAAGGAGAAGTCACGGACGCCAAGCTCATGCGAACCAAGGAAGGCAAGAGCCGCCAGTTCGCTTTCATAGGGTTCCGCTCCGAGCTTCAAGCTCAGGAGGCCATCAAATACTTCAATAAAACTTTTATTGATACTTACCGGATTAGTTGCGAGCTTGCTCGGAAAGTTGGGGATCCCGAGATTCCCAGGCCGTGGAGTCGACATACTAAGGAGAAAGAGAAGGAGAAGGAGAAGAGAGAGAGTGAAGGTGCTGCCGCGGCGGAGGCGAAAAGCCGGAGCGGAGTGGGAGGGAAGAGGAGTGAGGATGAGGATGAGATTGATGATCCTAAGCTGAAGGAGTTTTTGCAGGTGATGCAGCCTAGGGCTAAGTCGAAATTGTGGTCGAATGACACTGTGATTGCTAATGTTGAGGGGAAAATTGGGAAAGGAGAGAAGAAGAGAGAGCAGAGGAAGAAGGGGAATGAAGAGAGTTTGGCGACGATGGATGTGGAGGTAGAGGAGGATGTGGAGAAGGATGATTCGCACAATGTGGCCAAGGATAATGTGGTTTCGGATATGGATTACTTCAAGAGTAGAGTGAAGAAGGATTGGTCGGATTCCGAAAGTAGTGACAGTGATGATGAGGAAGAGGAGGAGGAGGAAGGTGAAGAATTAGATGCGAAGGAAGAAGCTGAGGTAAATGAAGAAGAGGCAGGAGAGGAACAAGTACTTGCACAGAGTAATCCTTCGTCCAGTTTGAAAGATGAGAAAGATGATACGCTTGATACTAGTCGGCTTTTTGTTCGGAATTTGCCATTTACAGCAACAGAGGACGAGTTGGAAGAGCATTTTAGCAAATTCGGGGATGCACAAGTTCATCTTGTTATTGATAAAGAAATGAATCGGTCCAAGGGCATTGCTTATGTTCTTTACTCGCATCCAGAATCGGCACAAAGGGCATTAGAAGAATTAGACGGTTCAATTTTTCAAGGAAGATTGTTGCATGTTATGCCAGCAAAACAAAAAAACCCGTCTCCAGGGGCTGATGATTCAGCAAACCAAGCTTCAAAGTCTCTTAAGCAACAAAGGGAGGAGAAGAGGAAAGCATCCGAAGCTAGTGGAGATACACGAGCATGGAATAGTTTGTTTATACGCACTGAGACGGCTGTTGATCACTTAGCTCGGAAGTTTGGGGTGAGCAAGAGTGATTTTCTTGACCCGCAAGCTGATGATGTCGCTGTACGTGTTGCTCAAGCGGAGACACAAGTGATTGCACAGACAAAAAAGGCTCTTACAAATGCTGGTGTAAATGTAGAATCTTTAGAGAATTTTGCTGCTGGGAAAGGTGGTGATATGAAAAGAAGCAACCATGTTATACTTGTGAAAAACTTGCCATATGGTTCTTCTGATAGTGAACTAGGAAACATGTTTGGAAAATTTGGGAGTTTTGAAAAAATCATTATGCCTCCGACAAAGACATTGGCGTTGGTTGTTTTTTTTGAACCTTCTGGAGCTCGAGCAGCTTTTAAAGGTTTGGCGTACAAGAAATACAAGGATGTTCCTCTATATTTGGAATGGGCTCCTGGCAATGTTCTTAGTCCAATTTCAACAGCTGAGAGCAATGAAAAGAAGCATTCTGCTGTTGCTGAACATAATCCACTGGTGGAAGGAACTCCAGATGATCTTGATCTTGATCCTGATAGAGTTGAGTCACGAACTCTATATGTCAAGAATTTGAACTTCAAGACATCTGATGAGAGCTTGAAGAAGCATTTTGAACAAGTGAAGGAGGGAAGAATATTGAGCGCCAAGGTGAAGAAACACTTGAAAAAAGGGAAGAATCTTTCAATGGGATTTGGTTTTGTAGAATTTGACTCTGTGGAGACAGCCACAGAGGTTTGCAAGGGTTTACAGGGAACAATTTTGGATGGCCACCAACTTATTTTGCAACATTGTCATGCCAAGCAAGATGATGTGCCAAAAAAAGTTGTGAAGGACAAAAGTTCAACAAAAATACTTGTAAAAAATGTAGCCTTTGAGGCTACAAAGAAAGAGCTTCGACAGTTGTTTAGTACATATGGCGAGATTAAAAGCTTGCGGTTACCAAACAGATTGGGACAGCATAGAGGCTTTGCATTTGTGGAGTTTGCCACAAAGCAAGAGGCAGAAAATGCCATCCAAGCGCTTGCAAGCACACATCTGTACGGTCGCCATCTGGTTCTGGAGAGAGCAAAGGAAGGTGAGACCTTGGAAGAATTAAGAGCTCGAATAGCTGCTCAGTTCACAGATGACCAAAATACTATTTCCAGGAAAAGGAAGGCTGTCGCAACCTTGGATGAAGATAACATGAAATTTGATATGACTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005507 GO:0008270 GO:0043167 GO:0043169 GO:0046872 GO:0046914
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallothio_2

Protein Analysis

902

Amino Acids

101.09

Weight (kDa)

5.95

Isoelectric Point (pI)

39.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 100 - 168 5.6e-15 RNA recognition motif
RRM_1 PF00076 379 - 447 7.8e-18 RNA recognition motif
RRM_1 PF00076 572 - 632 2e-07 RNA recognition motif
RRM_1 PF00076 687 - 760 2.3e-13 RNA recognition motif
RRM_1 PF00076 785 - 852 1.6e-18 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 282, 697
Acc36I ACCTGC 2 cut(s) 282, 697
AccB7I CCANNNNNTGG 1 cut(s) 552
AccBSI CCGCTC 2 cut(s) 438, 639
AccI GTMKAC 2 cut(s) 327, 559
AccII CGCG 1 cut(s) 617
AclWI GGATC 4 cut(s) 527, 540, 677, 2027
AcoI YGGCCR 2 cut(s) 891, 2269
AcsI RAATTY 8 cut(s) 310, 1147, 1196, 1666, 1775, 2071, 2207, 2690
AcuI CTGAAG 2 cut(s) 71, 713
AcyI GRCGYC 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 889
AfaI GTAC 6 cut(s) 67, 1068, 1581, 1880, 2413, 2543
AfeI AGCGCT 1 cut(s) 2523
AfiI CCNNNNNNNGG 5 cut(s) 46, 117, 552, 1376, 2652
AflII CTTAAG 1 cut(s) 1415
AflIII ACRYGT 4 cut(s) 68, 322, 1582, 1764
AhlI ACTAGT 1 cut(s) 1127
AjiI CACGTC 2 cut(s) 78, 325
AjnI CCWGG 4 cut(s) 545, 1375, 1921, 2645
Alw21I GWGCWC 2 cut(s) 1855, 2605
Alw26I GTCTC 7 cut(s) 167, 1377, 1416, 1493, 1592, 2216, 2576
AlwI GGATC 4 cut(s) 527, 540, 677, 2027
AlwNI CAGNNNCTG 1 cut(s) 1382
Ama87I CYCGRG 2 cut(s) 536, 1854
Aor51HI AGCGCT 1 cut(s) 2523
AoxI GGCC 4 cut(s) 459, 548, 891, 2269
ApeKI GCWGC 6 cut(s) 277, 611, 715, 1673, 1859, 2612
ApoI RAATTY 8 cut(s) 310, 1147, 1196, 1666, 1775, 2071, 2207, 2690
ArsI GACNNNNNNTTYG 2 cut(s) 725, 757
AspA2I CCTAGG 1 cut(s) 719
AspLEI GCGC 2 cut(s) 2147, 2524
AspS9I GGNCC 2 cut(s) 50, 1245
AsuC2I CCSGG 1 cut(s) 344
AsuHPI GGTGA 7 cut(s) 172, 721, 1016, 1546, 1700, 2164, 2591
AvaI CYCGRG 2 cut(s) 536, 1854
AvaII GGWCC 2 cut(s) 50, 1245
AvrII CCTAGG 1 cut(s) 719
BalI TGGCCA 2 cut(s) 893, 2271
BamHI GGATCC 1 cut(s) 532
BanII GRGCYC 3 cut(s) 1855, 1921, 2605
BauI CACGAG 1 cut(s) 1467
Bbv12I GWGCWC 2 cut(s) 1855, 2605
BbvCI CCTCAGC 1 cut(s) 1032
BbvI GCAGC 6 cut(s) 289, 598, 727, 1660, 1871, 2599
BccI CCATC 5 cut(s) 470, 835, 2261, 2522, 2559
BceAI ACGGC 2 cut(s) 535, 1518
BciT130I CCWGG 4 cut(s) 547, 1377, 1923, 2647
BclI TGATCA 1 cut(s) 1510
BcnI CCSGG 1 cut(s) 344
BcoDI GTCTC 7 cut(s) 167, 1377, 1416, 1493, 1592, 2216, 2576
BcuI ACTAGT 1 cut(s) 1127
BfaI CTAG 4 cut(s) 720, 1128, 1455, 1757
BfmI CTRYAG 1 cut(s) 275
BfoI RGCGCY 2 cut(s) 2148, 2525
BfrI CTTAAG 1 cut(s) 1415
BfuAI ACCTGC 2 cut(s) 282, 697
BglI GCCNNNNNGGC 1 cut(s) 2378
BlnI CCTAGG 1 cut(s) 719
BmcAI AGTACT 1 cut(s) 1068
Bme1390I CCNGG 5 cut(s) 344, 547, 1377, 1923, 2647
Bme18I GGWCC 2 cut(s) 50, 1245
BmeT110I CYCGRG 2 cut(s) 536, 1854
BmgBI CACGTC 2 cut(s) 78, 325
BmgT120I GGNCC 2 cut(s) 50, 1245
BmiI GGNNCC 4 cut(s) 51, 434, 534, 1920
BmrFI CCNGG 5 cut(s) 344, 547, 1377, 1923, 2647
BmsI GCATC 5 cut(s) 702, 1006, 1195, 1285, 1454
BplI GAGNNNNNCTC 2 cut(s) 338, 370
BpmI CTGGAG 4 cut(s) 1359, 1869, 1998, 2582
Bpu10I CCTNAGC 3 cut(s) 453, 687, 1032
BpuEI CTTGAG 1 cut(s) 1575
BpuMI CCSGG 1 cut(s) 344
BsaAI YACGTR 2 cut(s) 69, 1583
BsaBI GATNNNNATC 2 cut(s) 2025, 2031
BsaHI GRCGYC 1 cut(s) 378
BsaI GGTCTC 1 cut(s) 2576
BsaWI WCCGGW 1 cut(s) 498
Bsc4I CCNNNNNNNGG 5 cut(s) 46, 117, 552, 1376, 2652
Bse1I ACTGG 3 cut(s) 415, 1092, 2004
Bse3DI GCAATG 4 cut(s) 287, 1254, 1933, 1966
Bse8I GATNNNNATC 2 cut(s) 2025, 2031
BseBI CCWGG 4 cut(s) 547, 1377, 1923, 2647
BseJI GATNNNNATC 2 cut(s) 2025, 2031
BseLI CCNNNNNNNGG 5 cut(s) 46, 117, 552, 1376, 2652
BseMI GCAATG 4 cut(s) 287, 1254, 1933, 1966
BseMII CTCAG 7 cut(s) 162, 210, 467, 1023, 1488, 1944, 2630
BseNI ACTGG 3 cut(s) 415, 1092, 2004
BseRI GAGGAG 6 cut(s) 670, 872, 1004, 1007, 1010, 1445
BseXI GCAGC 6 cut(s) 289, 598, 727, 1660, 1871, 2599
BseYI CCCAGC 1 cut(s) 1676
Bsh1236I CGCG 1 cut(s) 617
Bsh1285I CGRYCG 1 cut(s) 2548
BshFI GGCC 4 cut(s) 461, 550, 893, 2271
BsiEI CGRYCG 1 cut(s) 2548
BsiHKAI GWGCWC 2 cut(s) 1855, 2605
BsiHKCI CYCGRG 2 cut(s) 536, 1854
BsiSI CCGG 3 cut(s) 343, 499, 634
BslFI GGGAC 2 cut(s) 57, 2469
BslI CCNNNNNNNGG 5 cut(s) 46, 117, 552, 1376, 2652
BsmAI GTCTC 7 cut(s) 167, 1377, 1416, 1493, 1592, 2216, 2576
BsmBI CGTCTC 2 cut(s) 1377, 1493
BsmFI GGGAC 2 cut(s) 57, 2469
BsmI GAATGC 1 cut(s) 1972
BsnI GGCC 4 cut(s) 461, 550, 893, 2271
Bso31I GGTCTC 1 cut(s) 2576
BsoBI CYCGRG 2 cut(s) 536, 1854
Bsp1286I GDGCHC 3 cut(s) 1855, 1921, 2605
Bsp143I GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
BspANI GGCC 4 cut(s) 461, 550, 893, 2271
BspCNI CTCAG 7 cut(s) 163, 211, 466, 1024, 1489, 1945, 2629
BspFNI CGCG 1 cut(s) 617
BspLI GGNNCC 4 cut(s) 51, 434, 534, 1920
BspMAI CTGCAG 1 cut(s) 279
BspMI ACCTGC 2 cut(s) 282, 697
BspPI GGATC 4 cut(s) 527, 540, 677, 2027
BspQI GCTCTTC 1 cut(s) 1176
BspTI CTTAAG 1 cut(s) 1415
BspTNI GGTCTC 1 cut(s) 2576
BsrBI CCGCTC 2 cut(s) 438, 639
BsrDI GCAATG 4 cut(s) 287, 1254, 1933, 1966
BsrI ACTGG 3 cut(s) 415, 1092, 2004
BssMI GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
BssNI GRCGYC 1 cut(s) 378
BssSI CACGAG 1 cut(s) 1467
BssT1I CCWWGG 7 cut(s) 396, 719, 894, 1248, 2148, 2586, 2670
Bst2BI CACGAG 1 cut(s) 1467
Bst2UI CCWGG 4 cut(s) 547, 1377, 1923, 2647
Bst4CI ACNGT 7 cut(s) 178, 202, 754, 974, 1316, 2403, 2546
Bst6I CTCTTC 8 cut(s) 587, 647, 791, 819, 981, 1041, 1176, 1430
BstACI GRCGYC 1 cut(s) 378
BstAFI CTTAAG 1 cut(s) 1415
BstAPI GCANNNNNTGC 3 cut(s) 712, 1348, 2510
BstBAI YACGTR 2 cut(s) 69, 1583
BstC8I GCNNGC 7 cut(s) 512, 516, 1353, 1563, 2435, 2526, 2530
BstDSI CCRYGG 2 cut(s) 551, 615
BstEII GGTNACC 1 cut(s) 2439
BstFNI CGCG 1 cut(s) 617
BstH2I RGCGCY 2 cut(s) 2148, 2525
BstHHI GCGC 2 cut(s) 2147, 2524
BstKTI GATC 6 cut(s) 535, 685, 1513, 2023, 2029, 2035
BstMAI GTCTC 7 cut(s) 167, 1377, 1416, 1493, 1592, 2216, 2576
BstMBI GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
BstMCI CGRYCG 1 cut(s) 2548
BstNI CCWGG 4 cut(s) 547, 1377, 1923, 2647
BstNSI RCATGY 2 cut(s) 1346, 1768
BstPI GGTNACC 1 cut(s) 2439
BstSCI CCNGG 5 cut(s) 342, 545, 1375, 1921, 2645
BstSFI CTRYAG 1 cut(s) 275
BstUI CGCG 1 cut(s) 617
BstV1I GCAGC 6 cut(s) 289, 598, 727, 1660, 1871, 2599
BstX2I RGATCY 1 cut(s) 532
BstYI RGATCY 1 cut(s) 532
BsuRI GGCC 4 cut(s) 461, 550, 893, 2271
BtgI CCRYGG 2 cut(s) 551, 615
BtrI CACGTC 2 cut(s) 78, 325
BtsIMutI CAGTG 5 cut(s) 207, 750, 979, 1494, 1997
BveI ACCTGC 2 cut(s) 282, 697
Cac8I GCNNGC 7 cut(s) 512, 516, 1353, 1563, 2435, 2526, 2530
CaiI CAGNNNCTG 1 cut(s) 1382
CfoI GCGC 2 cut(s) 2147, 2524
Cfr13I GGNCC 2 cut(s) 50, 1245
Cfr42I CCGCGG 1 cut(s) 618
CseI GACGC 2 cut(s) 292, 386
Csp6I GTAC 6 cut(s) 66, 1067, 1580, 1879, 2412, 2542
CspCI CAANNNNNGTGG 2 cut(s) 187, 222
CviAII CATG 7 cut(s) 388, 1343, 1473, 1709, 1765, 2297, 2686
CviQI GTAC 6 cut(s) 66, 1067, 1580, 1879, 2412, 2542
DpnI GATC 6 cut(s) 534, 684, 1512, 2022, 2028, 2034
DpnII GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
DraI TTTAAA 1 cut(s) 1867
DraIII CACNNNGTG 1 cut(s) 889
EaeI YGGCCR 2 cut(s) 891, 2269
Eam1104I CTCTTC 8 cut(s) 587, 647, 791, 819, 981, 1041, 1176, 1430
EarI CTCTTC 8 cut(s) 587, 647, 791, 819, 981, 1041, 1176, 1430
EciI GGCGGA 1 cut(s) 635
Ecl136II GAGCTC 2 cut(s) 1853, 2603
Eco130I CCWWGG 7 cut(s) 396, 719, 894, 1248, 2148, 2586, 2670
Eco24I GRGCYC 3 cut(s) 1855, 1921, 2605
Eco31I GGTCTC 1 cut(s) 2576
Eco47I GGWCC 2 cut(s) 50, 1245
Eco47III AGCGCT 1 cut(s) 2523
Eco53kI GAGCTC 2 cut(s) 1853, 2603
Eco57I CTGAAG 2 cut(s) 71, 713
Eco88I CYCGRG 2 cut(s) 536, 1854
Eco91I GGTNACC 1 cut(s) 2439
EcoICRI GAGCTC 2 cut(s) 1853, 2603
EcoO109I RGGNCCY 1 cut(s) 50
EcoO65I GGTNACC 1 cut(s) 2439
EcoRII CCWGG 4 cut(s) 545, 1375, 1921, 2645
EcoT14I CCWWGG 7 cut(s) 396, 719, 894, 1248, 2148, 2586, 2670
EcoT38I GRGCYC 3 cut(s) 1855, 1921, 2605
ErhI CCWWGG 7 cut(s) 396, 719, 894, 1248, 2148, 2586, 2670
Esp3I CGTCTC 2 cut(s) 1377, 1493
FaeI CATG 7 cut(s) 391, 1346, 1476, 1712, 1768, 2300, 2689
FalI AAGNNNNNCTT 6 cut(s) 95, 127, 1203, 1235, 2147, 2179
FaqI GGGAC 2 cut(s) 57, 2469
FatI CATG 7 cut(s) 387, 1342, 1472, 1708, 1764, 2296, 2685
FauI CCCGC 1 cut(s) 1566
FauNDI CATATG 2 cut(s) 1735, 2416
FbaI TGATCA 1 cut(s) 1510
FblI GTMKAC 2 cut(s) 327, 559
FriOI GRGCYC 3 cut(s) 1855, 1921, 2605
FspBI CTAG 4 cut(s) 720, 1128, 1455, 1757
GlaI GCGC 2 cut(s) 2146, 2523
GsaI CCCAGC 1 cut(s) 1680
GsuI CTGGAG 4 cut(s) 1359, 1869, 1998, 2582
HaeII RGCGCY 2 cut(s) 2148, 2525
HaeIII GGCC 4 cut(s) 461, 550, 893, 2271
HapII CCGG 3 cut(s) 343, 499, 634
HgaI GACGC 2 cut(s) 292, 386
HhaI GCGC 2 cut(s) 2147, 2524
Hin1I GRCGYC 1 cut(s) 378
Hin1II CATG 7 cut(s) 391, 1346, 1476, 1712, 1768, 2300, 2689
Hin6I GCGC 2 cut(s) 2145, 2522
HinP1I GCGC 2 cut(s) 2145, 2522
HincII GTYRAC 2 cut(s) 328, 560
HindII GTYRAC 2 cut(s) 328, 560
HindIII AAGCTT 2 cut(s) 1401, 2431
HpaII CCGG 3 cut(s) 343, 499, 634
HphI GGTGA 7 cut(s) 172, 721, 1016, 1546, 1700, 2164, 2591
Hpy166II GTNNAC 5 cut(s) 328, 560, 1754, 2249, 2622
Hpy8I GTNNAC 5 cut(s) 328, 560, 1754, 2249, 2622
Hpy99I CGWCG 4 cut(s) 295, 329, 332, 841
HpyCH4III ACNGT 7 cut(s) 178, 202, 754, 974, 1316, 2403, 2546
HpyCH4IV ACGT 4 cut(s) 68, 77, 324, 1582
HpySE526I ACGT 4 cut(s) 68, 77, 324, 1582
Hsp92I GRCGYC 1 cut(s) 378
Hsp92II CATG 7 cut(s) 391, 1346, 1476, 1712, 1768, 2300, 2689
HspAI GCGC 2 cut(s) 2145, 2522
Ksp22I TGATCA 1 cut(s) 1510
KspI CCGCGG 1 cut(s) 618
Kzo9I GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
LguI GCTCTTC 1 cut(s) 1176
LmnI GCTCC 6 cut(s) 345, 346, 443, 636, 1850, 1924
Lsp1109I GCAGC 6 cut(s) 289, 598, 727, 1660, 1871, 2599
LweI GCATC 5 cut(s) 702, 1006, 1195, 1285, 1454
MaeI CTAG 4 cut(s) 720, 1128, 1455, 1757
MaeII ACGT 4 cut(s) 68, 77, 324, 1582
MaeIII GTNAC 5 cut(s) 178, 370, 968, 2049, 2439
MalI GATC 6 cut(s) 534, 684, 1512, 2022, 2028, 2034
MbiI CCGCTC 2 cut(s) 438, 639
MboI GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
MflI RGATCY 1 cut(s) 532
MhlI GDGCHC 3 cut(s) 1855, 1921, 2605
MlsI TGGCCA 2 cut(s) 893, 2271
MluNI TGGCCA 2 cut(s) 893, 2271
MlyI GAGTC 3 cut(s) 565, 2057, 2207
MmeI TCCRAC 3 cut(s) 933, 1158, 1832
Mox20I TGGCCA 2 cut(s) 893, 2271
MscI TGGCCA 2 cut(s) 893, 2271
MseI TTAA 4 cut(s) 1416, 1866, 2427, 2597
MslI CAYNNNNRTG 2 cut(s) 1471, 2295
Msp20I TGGCCA 2 cut(s) 893, 2271
MspA1I CMGCKG 2 cut(s) 617, 1952
MspCI CTTAAG 1 cut(s) 1415
MspI CCGG 3 cut(s) 343, 499, 634
MspR9I CCNGG 5 cut(s) 344, 547, 1377, 1923, 2647
Mva1269I GAATGC 1 cut(s) 1972
MvaI CCWGG 4 cut(s) 547, 1377, 1923, 2647
MvnI CGCG 1 cut(s) 617
NciI CCSGG 1 cut(s) 344
NdeI CATATG 2 cut(s) 1735, 2416
NdeII GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
NlaIII CATG 7 cut(s) 391, 1346, 1476, 1712, 1768, 2300, 2689
NlaIV GGNNCC 4 cut(s) 51, 434, 534, 1920
NmuCI GTSAC 4 cut(s) 178, 370, 968, 2049
NspI RCATGY 2 cut(s) 1346, 1768
PaeR7I CTCGAG 1 cut(s) 1854
PaqCI CACCTGC 2 cut(s) 282, 697
PciI ACATGT 1 cut(s) 1764
PciSI GCTCTTC 1 cut(s) 1176
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PctI GAATGC 1 cut(s) 1972
PfeI GAWTC 9 cut(s) 242, 541, 878, 956, 1240, 1283, 1388, 1655, 2179
PflMI CCANNNNNTGG 1 cut(s) 552
PfoI TCCNGGA 2 cut(s) 342, 2645
PleI GAGTC 3 cut(s) 564, 2056, 2207
PpsI GAGTC 3 cut(s) 564, 2056, 2207
Ppu21I YACGTR 2 cut(s) 69, 1583
PpuMI RGGWCCY 1 cut(s) 50
PscI ACATGT 1 cut(s) 1764
Psp124BI GAGCTC 2 cut(s) 1855, 2605
Psp5II RGGWCCY 1 cut(s) 50
Psp6I CCWGG 4 cut(s) 545, 1375, 1921, 2645
PspEI GGTNACC 1 cut(s) 2439
PspFI CCCAGC 1 cut(s) 1676
PspGI CCWGG 4 cut(s) 545, 1375, 1921, 2645
PspN4I GGNNCC 4 cut(s) 51, 434, 534, 1920
PspPI GGNCC 2 cut(s) 50, 1245
PspPPI RGGWCCY 1 cut(s) 50
PspXI VCTCGAGB 1 cut(s) 1854
PstI CTGCAG 1 cut(s) 279
PstNI CAGNNNCTG 1 cut(s) 1382
PsuI RGATCY 1 cut(s) 532
PvuII CAGCTG 1 cut(s) 1952
RsaI GTAC 6 cut(s) 67, 1068, 1581, 1880, 2413, 2543
RsaNI GTAC 6 cut(s) 66, 1067, 1580, 1879, 2412, 2542
RseI CAYNNNNRTG 2 cut(s) 1471, 2295
SacI GAGCTC 2 cut(s) 1855, 2605
SacII CCGCGG 1 cut(s) 618
SalI GTCGAC 2 cut(s) 326, 558
SapI GCTCTTC 1 cut(s) 1176
SaqAI TTAA 4 cut(s) 1416, 1866, 2427, 2597
Sau3AI GATC 6 cut(s) 532, 682, 1510, 2020, 2026, 2032
Sau96I GGNCC 2 cut(s) 50, 1245
ScaI AGTACT 1 cut(s) 1068
SchI GAGTC 3 cut(s) 565, 2057, 2207
ScrFI CCNGG 5 cut(s) 344, 547, 1377, 1923, 2647
SduI GDGCHC 3 cut(s) 1855, 1921, 2605
SfaNI GCATC 5 cut(s) 702, 1006, 1195, 1285, 1454
SfcI CTRYAG 1 cut(s) 275
Sfr274I CTCGAG 1 cut(s) 1854
Sfr303I CCGCGG 1 cut(s) 618
SgrBI CCGCGG 1 cut(s) 618
SgrDI CGTCGACG 1 cut(s) 326
SinI GGWCC 2 cut(s) 50, 1245
SlaI CTCGAG 1 cut(s) 1854
SmiMI CAYNNNNRTG 2 cut(s) 1471, 2295
SmlI CTYRAG 3 cut(s) 1415, 1590, 1854
SmoI CTYRAG 3 cut(s) 1415, 1590, 1854
SpeI ACTAGT 1 cut(s) 1127
SspI AATATT 1 cut(s) 2139
SspMI CTAG 4 cut(s) 720, 1128, 1455, 1757
SstI GAGCTC 2 cut(s) 1855, 2605
StyD4I CCNGG 5 cut(s) 342, 545, 1375, 1921, 2645
StyI CCWWGG 7 cut(s) 396, 719, 894, 1248, 2148, 2586, 2670
TaaI ACNGT 7 cut(s) 178, 202, 754, 974, 1316, 2403, 2546
TaiI ACGT 4 cut(s) 71, 80, 327, 1585
TaqII GACCGA 1 cut(s) 1233
TatI WGTACW 2 cut(s) 1066, 2411
TauI GCSGC 6 cut(s) 212, 233, 236, 414, 617, 620
TfiI GAWTC 9 cut(s) 242, 541, 878, 956, 1240, 1283, 1388, 1655, 2179
Tru1I TTAA 4 cut(s) 1416, 1866, 2427, 2597
Tru9I TTAA 4 cut(s) 1416, 1866, 2427, 2597
TscAI CASTG 5 cut(s) 207, 757, 979, 1501, 2004
TseFI GTSAC 4 cut(s) 178, 370, 968, 2049
TseI GCWGC 6 cut(s) 277, 611, 715, 1673, 1859, 2612
Tsp45I GTSAC 4 cut(s) 178, 370, 968, 2049
TspGWI ACGGA 2 cut(s) 29, 389
TspRI CASTG 5 cut(s) 207, 757, 979, 1501, 2004
Van91I CCANNNNNTGG 1 cut(s) 552
Vha464I CTTAAG 1 cut(s) 1415
VpaK11BI GGWCC 2 cut(s) 50, 1245
XapI RAATTY 8 cut(s) 310, 1147, 1196, 1666, 1775, 2071, 2207, 2690
XceI RCATGY 2 cut(s) 1346, 1768
XcmI CCANNNNNNNNNTGG 1 cut(s) 901
XhoI CTCGAG 1 cut(s) 1854
XmaJI CCTAGG 1 cut(s) 719
XmiI GTMKAC 2 cut(s) 327, 559
XspI CTAG 4 cut(s) 720, 1128, 1455, 1757
ZrmI AGTACT 1 cut(s) 1068
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.