Rorug05G0158000

Minor allergen Alt a

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0010677
Physical Location & Seq
Forward (+)
14708008 .. 14709789
1782 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0158000.1

Sequence Viewer

Length: 1782 bp
ATGAGTTCCGAGGGAGAAATTGGTGAAGAAGTCCAGCCAAGAACCTACTGGAGATGGAGCAAACAAGATTTCCTGCCAGAAGAGTCCTTTCAAAATTGGAGCGCATATCGAACTGCCTTGTCACAGACGCGCCACAGGTTCAAGGACCGACTCATAAGCAGATCAAATGATGAAAATGAGACTAGGGAGCTCCCGAAACAAAGTGAGAATAACATGAAACGTTGCCTCACATGGTGGGATCTCATCTGGTTTGGTTTCGGTTCAGTAATTGGTGCAGGCATCTTTGTGCTTACTGGGCAAGAAACACATGACCATGCTGGACCAGCTATTGTCTTGTCCTATGTTGCTTCAGGTATCTCGGCGATGCTCTCTGTCTTCTGCTACACTGAATTTTCAGTCGAAATACCAGCGGCTGGTGGATCTTTTGCTTACCTCCGGATTGAGTTAGGAGACTTTGTAGCATTCATAACAGCAGGAAATATACTTCTTGAGGGTGTTGTAGGAAGTGCAGCAGTTGCCAGAGCATGGACTTCTTACTTCACATCGCTCTTGAATCGTCCCTCCAACTCATTACGCTTCCACACAAATCTCACTGAGGGCTACAATCTCCTGGACCCAATAGCTGTTGTTGTTCTGGCTGTAGCTGCTACAATTACAATGATCAGCACAAGGAAAACCTCTTACTTGAATTGGATAGCATCCGCAGTCAATAATGTTGTAATATTGTTTGTATTGATTGCAGGGTTTTCCCAAGCTAATCTCTCAAATATGAAACCTTTTATGCCTTTTGGGCCTAAAGGGGTCTTTCAAGCAGCTGCAATTGTTTACTTTGCTTACGGAGGATTTGACAGCATTGCCACCATGGCTGAAGAAACCAAAAATCCATCCAGAGACATACCGATTGGATTGCTTGGATCAATGTCAATCATAACTGTTGTATATTGTTTAATGGCACTTTCACTGCCTATGATGCAGAAATACACAGACATAGACCCAAATGCAGCTTACTCTATCGCATTTCAAAGTGTGGGCATGACATGGGCCAAGTACCTGGTAGCTCTTGGTGCTCTCAAGGGAATGACCACTGTTCTTCTGGTGGGAACACTTGGACAGGCTCGGTATATCACTCACATAGCACGAGCCCACATGATTCCACCATGGTTTGCTCTTGTCCATCCAAAGACAGGAACCCCCATAAATGCTACACTCTTGATAGTTGCTTCAAGTTCCTGGATTGCTTTCTTTTCAAGCTTGGACGTCTTGGCAAGCCTGTTATCGGTGAGCACACTCTTTATCTTCACGTTGATGGCTGTTGCACTTCTAGTGAGGAGATACTACGTGACCGATGTCACCCCAAGACCACATCTCTTGAAGCTAGTTGTTTACTTGGTGATCATTATTTCTTCCTCAATAGGGACTTCAACTTACTGGGGATTGAATCCCAATGGTTGGATTGGTTATGTTGTGACAGTTCCTCTTTGGTTCTTTGCAACTTTGGCAATGTCAGTGTTTCTACCTCAACAGAGGTCACCAAAAGTCTGGGGGGTTCCACTGGTTCCTTGGTTGCCATCCTTGTCAATTGCCACAAATATTTTTCTCATGGGATCTTTGGGTTCTTCTGCTTTTGAAAGATTTGGAATATGCACTGTTGTGATGCTTATATACTATGCTTTCTTTGGCCTTCATGCAACCTATGATATGGCCCATAAGAAAGGTATGCCAGAATCGCCAGAATCGCTGAAAGTTATCAATAGCAATACTAGAGAGGAGGCAGAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01110 map00130 map01110
Pfam Domains
Protein Families
FMN_red

Protein Analysis

593

Amino Acids

65.44

Weight (kDa)

8.18

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_permease_2 PF13520 76 - 477 4.7e-45 Amino acid permease
AA_permease PF00324 81 - 467 9.1e-28 Amino acid permease
AA_permease_C PF13906 514 - 563 1.1e-17 C-terminus of AA_permease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010677)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27270 AT4G27270 AT4G27270 AT4G27270
fragaria_vesca FvH4_3g21430 FvH4_3g21430
malus_domestica MD11G1230800.v1.1
prunus_persica Prupe.4G196500_v2.0.a1
pyrus_communis pycom03g16450 pycom11g20440
rosa_chinensis RchiOBHm_Chr5g0036861
rosa_laevigata RLG00000033728
rosa_multiflora Rmu_sc0000399.1_g000016
rosa_roxburghii Rroxscaffold_1G00044140
rosa_rugosa Rorug05G0158000
rosa_samantha Rh5AG250600 Rh5BG252200 Rh5CG284200 Rh5DG260700
rosa_wichuraiana Rw5G023050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1260
AccB7I CCANNNNNTGG 3 cut(s) 413, 525, 1449
AccII CGCG 1 cut(s) 130
AccIII TCCGGA 1 cut(s) 435
AciI CCGC 2 cut(s) 410, 702
AclI AACGTT 1 cut(s) 220
AclWI GGATC 4 cut(s) 246, 427, 922, 1612
AcsI RAATTY 1 cut(s) 389
AcuI CTGAAG 2 cut(s) 333, 888
AcyI GRCGYC 1 cut(s) 1257
AdeI CACNNNGTG 1 cut(s) 234
AfaI GTAC 1 cut(s) 1049
AfiI CCNNNNNNNGG 6 cut(s) 413, 525, 1184, 1276, 1413, 1449
AjnI CCWGG 3 cut(s) 609, 1050, 1229
AleI CACNNNNGTG 1 cut(s) 1649
Alw21I GWGCWC 3 cut(s) 192, 1069, 1286
Alw26I GTCTC 3 cut(s) 173, 444, 885
AlwI GGATC 4 cut(s) 246, 427, 922, 1612
AlwNI CAGNNNCTG 1 cut(s) 413
Aor13HI TCCGGA 1 cut(s) 435
AoxI GGCC 4 cut(s) 791, 1041, 1678, 1701
ApeKI GCWGC 5 cut(s) 509, 644, 812, 815, 1001
ApoI RAATTY 1 cut(s) 389
AspLEI GCGC 2 cut(s) 104, 132
AspS9I GGNCC 6 cut(s) 145, 320, 613, 791, 1041, 1702
AsuHPI GGTGA 5 cut(s) 35, 1291, 1342, 1402, 1521
AvaII GGWCC 3 cut(s) 145, 320, 613
BanII GRGCYC 2 cut(s) 192, 1144
BauI CACGAG 1 cut(s) 1137
BbsI GAAGAC 1 cut(s) 367
Bbv12I GWGCWC 3 cut(s) 192, 1069, 1286
BbvI GCAGC 5 cut(s) 521, 631, 802, 824, 1013
BccI CCATC 5 cut(s) 48, 892, 1182, 1300, 1576
BcgI CGANNNNNNTGC 2 cut(s) 889, 923
BciT130I CCWGG 3 cut(s) 611, 1052, 1231
BclI TGATCA 2 cut(s) 660, 1392
BcoDI GTCTC 3 cut(s) 173, 444, 885
BfaI CTAG 4 cut(s) 183, 1322, 1376, 1761
BfmI CTRYAG 1 cut(s) 639
BglI GCCNNNNNGGC 2 cut(s) 790, 863
BisI GCNGC 6 cut(s) 411, 510, 645, 813, 816, 1002
BlsI GCNGC 6 cut(s) 412, 511, 646, 814, 817, 1003
Bme1390I CCNGG 3 cut(s) 611, 1052, 1231
Bme18I GGWCC 3 cut(s) 145, 320, 613
BmgT120I GGNCC 6 cut(s) 145, 320, 613, 791, 1041, 1702
BmiI GGNNCC 4 cut(s) 615, 1189, 1548, 1557
BmrFI CCNGG 3 cut(s) 611, 1052, 1231
BmrI ACTGGG 2 cut(s) 303, 1438
BmsI GCATC 5 cut(s) 288, 354, 707, 960, 1644
BmuI ACTGGG 2 cut(s) 303, 1438
BoxI GACNNNNGTC 1 cut(s) 1346
BpiI GAAGAC 1 cut(s) 367
BpmI CTGGAG 1 cut(s) 70
BpuEI CTTGAG 2 cut(s) 509, 1055
BsaAI YACGTR 1 cut(s) 1339
BsaHI GRCGYC 1 cut(s) 1257
BsaJI CCNNGG 4 cut(s) 9, 861, 1157, 1559
BsaWI WCCGGW 1 cut(s) 435
BsaXI ACNNNNNCTCC 2 cut(s) 441, 471
Bsc4I CCNNNNNNNGG 6 cut(s) 413, 525, 1184, 1276, 1413, 1449
Bse1I ACTGG 4 cut(s) 53, 298, 1433, 1557
Bse3DI GCAATG 2 cut(s) 852, 1506
BseAI TCCGGA 1 cut(s) 435
BseBI CCWGG 3 cut(s) 611, 1052, 1231
BseDI CCNNGG 4 cut(s) 9, 861, 1157, 1559
BseGI GGATG 4 cut(s) 698, 884, 1174, 1568
BseLI CCNNNNNNNGG 6 cut(s) 413, 525, 1184, 1276, 1413, 1449
BseMI GCAATG 2 cut(s) 852, 1506
BseMII CTCAG 1 cut(s) 585
BseNI ACTGG 4 cut(s) 53, 298, 1433, 1557
BseRI GAGGAG 2 cut(s) 1342, 1781
BseXI GCAGC 5 cut(s) 521, 631, 802, 824, 1013
BsgI GTGCAG 2 cut(s) 294, 528
Bsh1236I CGCG 1 cut(s) 130
BshFI GGCC 4 cut(s) 793, 1043, 1680, 1703
BsiHKAI GWGCWC 3 cut(s) 192, 1069, 1286
BsiSI CCGG 1 cut(s) 436
BslFI GGGAC 2 cut(s) 543, 1429
BslI CCNNNNNNNGG 6 cut(s) 413, 525, 1184, 1276, 1413, 1449
BsmAI GTCTC 3 cut(s) 173, 444, 885
BsmFI GGGAC 2 cut(s) 543, 1429
BsmI GAATGC 1 cut(s) 461
BsnI GGCC 4 cut(s) 793, 1043, 1680, 1703
Bsp1286I GDGCHC 4 cut(s) 192, 1069, 1144, 1286
Bsp13I TCCGGA 1 cut(s) 435
Bsp143I GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
Bsp19I CCATGG 2 cut(s) 861, 1157
BspACI CCGC 2 cut(s) 410, 702
BspANI GGCC 4 cut(s) 793, 1043, 1680, 1703
BspCNI CTCAG 1 cut(s) 586
BspEI TCCGGA 1 cut(s) 435
BspFNI CGCG 1 cut(s) 130
BspLI GGNNCC 4 cut(s) 615, 1189, 1548, 1557
BspPI GGATC 4 cut(s) 246, 427, 922, 1612
BsrDI GCAATG 2 cut(s) 852, 1506
BsrI ACTGG 4 cut(s) 53, 298, 1433, 1557
BssECI CCNNGG 4 cut(s) 9, 861, 1157, 1559
BssMI GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
BssNI GRCGYC 1 cut(s) 1257
BssSI CACGAG 1 cut(s) 1137
BssT1I CCWWGG 3 cut(s) 861, 1157, 1559
Bst2BI CACGAG 1 cut(s) 1137
Bst2UI CCWGG 3 cut(s) 611, 1052, 1231
Bst4CI ACNGT 4 cut(s) 934, 1087, 1471, 1648
Bst6I CTCTTC 1 cut(s) 75
BstACI GRCGYC 1 cut(s) 1257
BstAPI GCANNNNNTGC 1 cut(s) 515
BstBAI YACGTR 1 cut(s) 1339
BstC8I GCNNGC 2 cut(s) 277, 1267
BstDEI CTNAG 1 cut(s) 594
BstDSI CCRYGG 2 cut(s) 861, 1157
BstEII GGTNACC 1 cut(s) 1527
BstF5I GGATG 4 cut(s) 698, 884, 1174, 1568
BstFNI CGCG 1 cut(s) 130
BstHHI GCGC 2 cut(s) 104, 132
BstKTI GATC 7 cut(s) 164, 241, 422, 663, 917, 1395, 1607
BstMAI GTCTC 3 cut(s) 173, 444, 885
BstMBI GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
BstNI CCWGG 3 cut(s) 611, 1052, 1231
BstPAI GACNNNNGTC 1 cut(s) 1346
BstPI GGTNACC 1 cut(s) 1527
BstSCI CCNGG 3 cut(s) 609, 1050, 1229
BstSFI CTRYAG 1 cut(s) 639
BstUI CGCG 1 cut(s) 130
BstV1I GCAGC 5 cut(s) 521, 631, 802, 824, 1013
BstV2I GAAGAC 1 cut(s) 367
BstX2I RGATCY 3 cut(s) 238, 419, 1604
BstXI CCANNNNNNTGG 2 cut(s) 1051, 1539
BstYI RGATCY 3 cut(s) 238, 419, 1604
BsuRI GGCC 4 cut(s) 793, 1043, 1680, 1703
BtgI CCRYGG 2 cut(s) 861, 1157
BtgZI GCGATG 2 cut(s) 377, 528
BtsCI GGATG 4 cut(s) 698, 884, 1174, 1568
BtsI GCAGTG 1 cut(s) 959
BtsIMutI CAGTG 7 cut(s) 384, 591, 959, 1083, 1512, 1550, 1644
Cac8I GCNNGC 2 cut(s) 277, 1267
CaiI CAGNNNCTG 1 cut(s) 413
CfoI GCGC 2 cut(s) 104, 132
Cfr13I GGNCC 6 cut(s) 145, 320, 613, 791, 1041, 1702
CseI GACGC 1 cut(s) 136
CsiI ACCWGGT 1 cut(s) 1050
Csp6I GTAC 1 cut(s) 1048
CspCI CAANNNNNGTGG 2 cut(s) 1350, 1385
CviQI GTAC 1 cut(s) 1048
DdeI CTNAG 1 cut(s) 594
DpnI GATC 7 cut(s) 163, 240, 421, 662, 916, 1394, 1606
DpnII GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
DraIII CACNNNGTG 1 cut(s) 234
Eam1104I CTCTTC 1 cut(s) 75
EarI CTCTTC 1 cut(s) 75
Ecl136II GAGCTC 1 cut(s) 190
Eco130I CCWWGG 3 cut(s) 861, 1157, 1559
Eco24I GRGCYC 2 cut(s) 192, 1144
Eco47I GGWCC 3 cut(s) 145, 320, 613
Eco53kI GAGCTC 1 cut(s) 190
Eco57I CTGAAG 2 cut(s) 333, 888
Eco91I GGTNACC 1 cut(s) 1527
EcoICRI GAGCTC 1 cut(s) 190
EcoO65I GGTNACC 1 cut(s) 1527
EcoRII CCWGG 3 cut(s) 609, 1050, 1229
EcoT14I CCWWGG 3 cut(s) 861, 1157, 1559
EcoT38I GRGCYC 2 cut(s) 192, 1144
ErhI CCWWGG 3 cut(s) 861, 1157, 1559
FaqI GGGAC 2 cut(s) 543, 1429
FbaI TGATCA 2 cut(s) 660, 1392
Fnu4HI GCNGC 6 cut(s) 411, 510, 645, 813, 816, 1002
FokI GGATG 4 cut(s) 685, 871, 1161, 1555
FriOI GRGCYC 2 cut(s) 192, 1144
Fsp4HI GCNGC 6 cut(s) 411, 510, 645, 813, 816, 1002
FspBI CTAG 4 cut(s) 183, 1322, 1376, 1761
GlaI GCGC 2 cut(s) 103, 131
GluI GCNGC 6 cut(s) 411, 510, 645, 813, 816, 1002
GsuI CTGGAG 1 cut(s) 70
HaeIII GGCC 4 cut(s) 793, 1043, 1680, 1703
HapII CCGG 1 cut(s) 436
HgaI GACGC 1 cut(s) 136
HhaI GCGC 2 cut(s) 104, 132
Hin1I GRCGYC 1 cut(s) 1257
Hin6I GCGC 2 cut(s) 102, 130
HinP1I GCGC 2 cut(s) 102, 130
HindIII AAGCTT 1 cut(s) 1249
HinfI GANTC 7 cut(s) 83, 150, 553, 1150, 1438, 1724, 1733
HpaII CCGG 1 cut(s) 436
HphI GGTGA 5 cut(s) 35, 1291, 1342, 1402, 1521
Hpy166II GTNNAC 2 cut(s) 826, 1384
Hpy188I TCNGA 1 cut(s) 10
Hpy188III TCNNGA 7 cut(s) 193, 436, 488, 550, 888, 1210, 1369
Hpy8I GTNNAC 2 cut(s) 826, 1384
HpyAV CCTTC 1 cut(s) 1691
HpyCH4III ACNGT 4 cut(s) 934, 1087, 1471, 1648
HpyCH4IV ACGT 4 cut(s) 220, 1257, 1301, 1338
HpyF3I CTNAG 1 cut(s) 594
HpySE526I ACGT 4 cut(s) 220, 1257, 1301, 1338
Hsp92I GRCGYC 1 cut(s) 1257
HspAI GCGC 2 cut(s) 102, 130
Kpn2I TCCGGA 1 cut(s) 435
Ksp22I TGATCA 2 cut(s) 660, 1392
Kzo9I GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
LmnI GCTCC 4 cut(s) 57, 99, 187, 195
Lsp1109I GCAGC 5 cut(s) 521, 631, 802, 824, 1013
LweI GCATC 5 cut(s) 288, 354, 707, 960, 1644
MabI ACCWGGT 1 cut(s) 1050
MaeI CTAG 4 cut(s) 183, 1322, 1376, 1761
MaeII ACGT 4 cut(s) 220, 1257, 1301, 1338
MaeIII GTNAC 5 cut(s) 120, 1339, 1348, 1465, 1527
MalI GATC 7 cut(s) 163, 240, 421, 662, 916, 1394, 1606
MboI GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
MboII GAAGA 8 cut(s) 38, 92, 367, 881, 1082, 1288, 1395, 1608
MfeI CAATTG 2 cut(s) 819, 1578
MflI RGATCY 3 cut(s) 238, 419, 1604
MhlI GDGCHC 4 cut(s) 192, 1069, 1144, 1286
MluCI AATT 8 cut(s) 18, 94, 267, 389, 651, 688, 819, 1578
MlyI GAGTC 2 cut(s) 92, 144
MmeI TCCRAC 2 cut(s) 588, 1430
MroI TCCGGA 1 cut(s) 435
MseI TTAA 1 cut(s) 947
MslI CAYNNNNRTG 4 cut(s) 284, 312, 1304, 1649
MspA1I CMGCKG 2 cut(s) 410, 815
MspI CCGG 1 cut(s) 436
MspR9I CCNGG 3 cut(s) 611, 1052, 1231
MunI CAATTG 2 cut(s) 819, 1578
Mva1269I GAATGC 1 cut(s) 461
MvaI CCWGG 3 cut(s) 611, 1052, 1231
MvnI CGCG 1 cut(s) 130
NcoI CCATGG 2 cut(s) 861, 1157
NdeII GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
NlaIV GGNNCC 4 cut(s) 615, 1189, 1548, 1557
NmeAIII GCCGAG 1 cut(s) 338
NmuCI GTSAC 5 cut(s) 120, 1339, 1348, 1465, 1527
OliI CACNNNNGTG 1 cut(s) 1649
PctI GAATGC 1 cut(s) 461
PfeI GAWTC 5 cut(s) 553, 1150, 1438, 1724, 1733
PflMI CCANNNNNTGG 3 cut(s) 413, 525, 1449
PfoI TCCNGGA 2 cut(s) 609, 1229
PkrI GCNGC 6 cut(s) 412, 511, 646, 814, 817, 1003
PleI GAGTC 2 cut(s) 91, 144
PpsI GAGTC 2 cut(s) 91, 144
Ppu21I YACGTR 1 cut(s) 1339
PshAI GACNNNNGTC 1 cut(s) 1346
Psp124BI GAGCTC 1 cut(s) 192
Psp1406I AACGTT 1 cut(s) 220
Psp6I CCWGG 3 cut(s) 609, 1050, 1229
PspEI GGTNACC 1 cut(s) 1527
PspGI CCWGG 3 cut(s) 609, 1050, 1229
PspN4I GGNNCC 4 cut(s) 615, 1189, 1548, 1557
PspPI GGNCC 6 cut(s) 145, 320, 613, 791, 1041, 1702
PstNI CAGNNNCTG 1 cut(s) 413
PsuI RGATCY 3 cut(s) 238, 419, 1604
PvuII CAGCTG 1 cut(s) 815
RsaI GTAC 1 cut(s) 1049
RsaNI GTAC 1 cut(s) 1048
RseI CAYNNNNRTG 4 cut(s) 284, 312, 1304, 1649
SacI GAGCTC 1 cut(s) 192
SaqAI TTAA 1 cut(s) 947
SatI GCNGC 6 cut(s) 411, 510, 645, 813, 816, 1002
Sau3AI GATC 7 cut(s) 161, 238, 419, 660, 914, 1392, 1604
Sau96I GGNCC 6 cut(s) 145, 320, 613, 791, 1041, 1702
SchI GAGTC 2 cut(s) 92, 144
ScrFI CCNGG 3 cut(s) 611, 1052, 1231
SduI GDGCHC 4 cut(s) 192, 1069, 1144, 1286
SexAI ACCWGGT 1 cut(s) 1050
SfaNI GCATC 5 cut(s) 288, 354, 707, 960, 1644
SfcI CTRYAG 1 cut(s) 639
SinI GGWCC 3 cut(s) 145, 320, 613
SmiMI CAYNNNNRTG 4 cut(s) 284, 312, 1304, 1649
SmlI CTYRAG 2 cut(s) 488, 1070
SmoI CTYRAG 2 cut(s) 488, 1070
Sse9I AATT 8 cut(s) 18, 94, 267, 389, 651, 688, 819, 1578
SsiI CCGC 2 cut(s) 410, 702
SspI AATATT 2 cut(s) 723, 1591
SspMI CTAG 4 cut(s) 183, 1322, 1376, 1761
SstI GAGCTC 1 cut(s) 192
StyD4I CCNGG 3 cut(s) 609, 1050, 1229
StyI CCWWGG 3 cut(s) 861, 1157, 1559
TaaI ACNGT 4 cut(s) 934, 1087, 1471, 1648
TaiI ACGT 4 cut(s) 223, 1260, 1304, 1341
TaqI TCGA 2 cut(s) 109, 399
TaqII GACCGA 2 cut(s) 162, 1358
TasI AATT 8 cut(s) 18, 94, 267, 389, 651, 688, 819, 1578
TauI GCSGC 1 cut(s) 413
TfiI GAWTC 5 cut(s) 553, 1150, 1438, 1724, 1733
Tru1I TTAA 1 cut(s) 947
Tru9I TTAA 1 cut(s) 947
TscAI CASTG 7 cut(s) 391, 598, 966, 1090, 1512, 1557, 1651
TseFI GTSAC 5 cut(s) 120, 1339, 1348, 1465, 1527
TseI GCWGC 5 cut(s) 509, 644, 812, 815, 1001
Tsp45I GTSAC 5 cut(s) 120, 1339, 1348, 1465, 1527
TspDTI ATGAA 5 cut(s) 186, 230, 454, 785, 1673
TspGWI ACGGA 1 cut(s) 852
TspRI CASTG 7 cut(s) 391, 598, 966, 1090, 1512, 1557, 1651
Van91I CCANNNNNTGG 3 cut(s) 413, 525, 1449
VpaK11BI GGWCC 3 cut(s) 145, 320, 613
XapI RAATTY 1 cut(s) 389
XcmI CCANNNNNNNNNTGG 3 cut(s) 45, 1090, 1557
XspI CTAG 4 cut(s) 183, 1322, 1376, 1761
ZraI GACGTC 1 cut(s) 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.