RNA-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G09230 AT1G09230 AT1G09230 |
| fragaria_vesca | FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 FvH4_3g32950 |
| malus_domestica | MD03G1112900.v1.1 |
| prunus_persica | Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 Prupe.6G097200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0060221 |
| rosa_laevigata | RLG00000035347 |
| rosa_roxburghii | Rroxscaffold_1G00020500 |
| rosa_rugosa | Rorug05G0328400 |
| rosa_samantha | Rh5AG392600 Rh5BG405100 Rh5CG429200 Rh5DG420700 |
| rosa_wichuraiana | Rw5G036990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 250 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 260, 1104 |
| AccI | GTMKAC | 2 cut(s) | 351, 822 |
| AccIII | TCCGGA | 1 cut(s) | 1126 |
| AciI | CCGC | 3 cut(s) | 71, 409, 628 |
| AclWI | GGATC | 3 cut(s) | 992, 1005, 1169 |
| AcoI | YGGCCR | 2 cut(s) | 300, 512 |
| AcsI | RAATTY | 5 cut(s) | 15, 403, 735, 1058, 1198 |
| AcuI | CTGAAG | 2 cut(s) | 459, 996 |
| AdeI | CACNNNGTG | 1 cut(s) | 545 |
| AfaI | GTAC | 3 cut(s) | 195, 243, 258 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 26, 211, 260, 542, 1104 |
| AgsI | TTSAA | 5 cut(s) | 98, 161, 776, 787, 1103 |
| AjnI | CCWGG | 1 cut(s) | 541 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 110, 142 |
| AleI | CACNNNNGTG | 1 cut(s) | 837 |
| AluBI | AGCT | 7 cut(s) | 101, 443, 747, 768, 872, 974, 1214 |
| AluI | AGCT | 7 cut(s) | 101, 443, 747, 768, 872, 974, 1214 |
| Alw21I | GWGCWC | 1 cut(s) | 874 |
| Alw26I | GTCTC | 3 cut(s) | 278, 353, 418 |
| AlwI | GGATC | 3 cut(s) | 992, 1005, 1169 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 428 |
| Aor13HI | TCCGGA | 1 cut(s) | 1126 |
| AoxI | GGCC | 2 cut(s) | 300, 512 |
| ApeKI | GCWGC | 7 cut(s) | 68, 80, 175, 448, 744, 747, 1211 |
| ApoI | RAATTY | 5 cut(s) | 15, 403, 735, 1058, 1198 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 984 |
| AspLEI | GCGC | 1 cut(s) | 1170 |
| AspS9I | GGNCC | 2 cut(s) | 659, 925 |
| AsuHPI | GGTGA | 4 cut(s) | 118, 275, 293, 1037 |
| AvaII | GGWCC | 2 cut(s) | 659, 925 |
| BalI | TGGCCA | 1 cut(s) | 302 |
| BamHI | GGATCC | 1 cut(s) | 997 |
| BanI | GGYRCC | 1 cut(s) | 250 |
| BanII | GRGCYC | 1 cut(s) | 874 |
| BbsI | GAAGAC | 1 cut(s) | 561 |
| Bbv12I | GWGCWC | 1 cut(s) | 874 |
| BbvCI | CCTCAGC | 1 cut(s) | 102 |
| BbvI | GCAGC | 7 cut(s) | 55, 67, 187, 435, 734, 756, 1223 |
| BccI | CCATC | 2 cut(s) | 580, 650 |
| BceAI | ACGGC | 1 cut(s) | 436 |
| BciT130I | CCWGG | 1 cut(s) | 543 |
| BcoDI | GTCTC | 3 cut(s) | 278, 353, 418 |
| BfaI | CTAG | 1 cut(s) | 245 |
| BisI | GCNGC | 7 cut(s) | 69, 81, 176, 449, 745, 748, 1212 |
| BlsI | GCNGC | 7 cut(s) | 70, 82, 177, 450, 746, 749, 1213 |
| Bme1390I | CCNGG | 1 cut(s) | 543 |
| Bme18I | GGWCC | 2 cut(s) | 659, 925 |
| BmgT120I | GGNCC | 2 cut(s) | 659, 925 |
| BmiI | GGNNCC | 4 cut(s) | 252, 521, 927, 999 |
| BmrFI | CCNGG | 1 cut(s) | 543 |
| BmrI | ACTGGG | 1 cut(s) | 174 |
| BmsI | GCATC | 2 cut(s) | 159, 478 |
| BmuI | ACTGGG | 1 cut(s) | 174 |
| BoxI | GACNNNNGTC | 1 cut(s) | 503 |
| BpiI | GAAGAC | 1 cut(s) | 561 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 34, 66 |
| Bpu10I | CCTNAGC | 1 cut(s) | 102 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| BsaI | GGTCTC | 3 cut(s) | 278, 353, 418 |
| BsaJI | CCNNGG | 3 cut(s) | 55, 379, 515 |
| BsaWI | WCCGGW | 1 cut(s) | 1126 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 26, 211, 260, 542, 1104 |
| Bse1I | ACTGG | 3 cut(s) | 180, 254, 303 |
| BseAI | TCCGGA | 1 cut(s) | 1126 |
| BseBI | CCWGG | 1 cut(s) | 543 |
| BseDI | CCNNGG | 3 cut(s) | 55, 379, 515 |
| BseGI | GGATG | 3 cut(s) | 493, 642, 676 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 26, 211, 260, 542, 1104 |
| BseMII | CTCAG | 1 cut(s) | 93 |
| BseNI | ACTGG | 3 cut(s) | 180, 254, 303 |
| BseRI | GAGGAG | 2 cut(s) | 233, 413 |
| BseXI | GCAGC | 7 cut(s) | 55, 67, 187, 435, 734, 756, 1223 |
| BsgI | GTGCAG | 4 cut(s) | 66, 194, 522, 570 |
| BshFI | GGCC | 2 cut(s) | 302, 514 |
| BshNI | GGYRCC | 1 cut(s) | 250 |
| BsiHKAI | GWGCWC | 1 cut(s) | 874 |
| BsiSI | CCGG | 1 cut(s) | 1127 |
| BslFI | GGGAC | 2 cut(s) | 511, 911 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 26, 211, 260, 542, 1104 |
| BsmAI | GTCTC | 3 cut(s) | 278, 353, 418 |
| BsmFI | GGGAC | 2 cut(s) | 511, 911 |
| BsmI | GAATGC | 1 cut(s) | 1122 |
| BsnI | GGCC | 2 cut(s) | 302, 514 |
| Bso31I | GGTCTC | 3 cut(s) | 278, 353, 418 |
| Bsp1286I | GDGCHC | 1 cut(s) | 874 |
| Bsp13I | TCCGGA | 1 cut(s) | 1126 |
| Bsp143I | GATC | 2 cut(s) | 997, 1161 |
| Bsp19I | CCATGG | 2 cut(s) | 55, 379 |
| BspACI | CCGC | 3 cut(s) | 71, 409, 628 |
| BspANI | GGCC | 2 cut(s) | 302, 514 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspEI | TCCGGA | 1 cut(s) | 1126 |
| BspLI | GGNNCC | 4 cut(s) | 252, 521, 927, 999 |
| BspPI | GGATC | 3 cut(s) | 992, 1005, 1169 |
| BspT107I | GGYRCC | 1 cut(s) | 250 |
| BspTNI | GGTCTC | 3 cut(s) | 278, 353, 418 |
| BsrI | ACTGG | 3 cut(s) | 180, 254, 303 |
| BssECI | CCNNGG | 3 cut(s) | 55, 379, 515 |
| BssMI | GATC | 2 cut(s) | 997, 1161 |
| BssT1I | CCWWGG | 2 cut(s) | 55, 379 |
| Bst2UI | CCWGG | 1 cut(s) | 543 |
| Bst4CI | ACNGT | 3 cut(s) | 198, 313, 430 |
| Bst6I | CTCTTC | 3 cut(s) | 156, 210, 261 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 568 |
| BstC8I | GCNNGC | 2 cut(s) | 874, 1120 |
| BstDEI | CTNAG | 3 cut(s) | 102, 795, 877 |
| BstDSI | CCRYGG | 2 cut(s) | 55, 379 |
| BstF5I | GGATG | 3 cut(s) | 493, 642, 676 |
| BstHHI | GCGC | 1 cut(s) | 1170 |
| BstKTI | GATC | 2 cut(s) | 1000, 1164 |
| BstMAI | GTCTC | 3 cut(s) | 278, 353, 418 |
| BstMBI | GATC | 2 cut(s) | 997, 1161 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 77, 568 |
| BstNI | CCWGG | 1 cut(s) | 543 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 503 |
| BstSCI | CCNGG | 1 cut(s) | 541 |
| BstV1I | GCAGC | 7 cut(s) | 55, 67, 187, 435, 734, 756, 1223 |
| BstV2I | GAAGAC | 1 cut(s) | 561 |
| BstX2I | RGATCY | 1 cut(s) | 997 |
| BstYI | RGATCY | 1 cut(s) | 997 |
| BsuRI | GGCC | 2 cut(s) | 302, 514 |
| BtgI | CCRYGG | 2 cut(s) | 55, 379 |
| BtgZI | GCGATG | 1 cut(s) | 1003 |
| BtsCI | GGATG | 3 cut(s) | 493, 642, 676 |
| BtsIMutI | CAGTG | 2 cut(s) | 187, 352 |
| Cac8I | GCNNGC | 2 cut(s) | 874, 1120 |
| CaiI | CAGNNNCTG | 1 cut(s) | 428 |
| CfoI | GCGC | 1 cut(s) | 1170 |
| Cfr13I | GGNCC | 2 cut(s) | 659, 925 |
| CsiI | ACCWGGT | 1 cut(s) | 541 |
| Csp6I | GTAC | 3 cut(s) | 194, 242, 257 |
| CviAII | CATG | 9 cut(s) | 56, 86, 260, 380, 763, 808, 994, 1165, 1174 |
| CviQI | GTAC | 3 cut(s) | 194, 242, 257 |
| DdeI | CTNAG | 3 cut(s) | 102, 795, 877 |
| DpnI | GATC | 2 cut(s) | 999, 1163 |
| DpnII | GATC | 2 cut(s) | 997, 1161 |
| DraI | TTTAAA | 1 cut(s) | 594 |
| DraIII | CACNNNGTG | 1 cut(s) | 545 |
| EaeI | YGGCCR | 2 cut(s) | 300, 512 |
| Eam1104I | CTCTTC | 3 cut(s) | 156, 210, 261 |
| EarI | CTCTTC | 3 cut(s) | 156, 210, 261 |
| Ecl136II | GAGCTC | 1 cut(s) | 872 |
| Eco130I | CCWWGG | 2 cut(s) | 55, 379 |
| Eco24I | GRGCYC | 1 cut(s) | 874 |
| Eco31I | GGTCTC | 3 cut(s) | 278, 353, 418 |
| Eco47I | GGWCC | 2 cut(s) | 659, 925 |
| Eco53kI | GAGCTC | 1 cut(s) | 872 |
| Eco57I | CTGAAG | 2 cut(s) | 459, 996 |
| EcoICRI | GAGCTC | 1 cut(s) | 872 |
| EcoRII | CCWGG | 1 cut(s) | 541 |
| EcoT14I | CCWWGG | 2 cut(s) | 55, 379 |
| EcoT22I | ATGCAT | 1 cut(s) | 608 |
| EcoT38I | GRGCYC | 1 cut(s) | 874 |
| ErhI | CCWWGG | 2 cut(s) | 55, 379 |
| FaeI | CATG | 9 cut(s) | 59, 89, 263, 383, 766, 811, 997, 1168, 1177 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 542, 574 |
| FaqI | GGGAC | 2 cut(s) | 511, 911 |
| FatI | CATG | 9 cut(s) | 55, 85, 259, 379, 762, 807, 993, 1164, 1173 |
| FauI | CCCGC | 1 cut(s) | 402 |
| FblI | GTMKAC | 2 cut(s) | 351, 822 |
| Fnu4HI | GCNGC | 7 cut(s) | 69, 81, 176, 449, 745, 748, 1212 |
| FokI | GGATG | 3 cut(s) | 500, 629, 663 |
| FriOI | GRGCYC | 1 cut(s) | 874 |
| Fsp4HI | GCNGC | 7 cut(s) | 69, 81, 176, 449, 745, 748, 1212 |
| FspBI | CTAG | 1 cut(s) | 245 |
| GlaI | GCGC | 1 cut(s) | 1169 |
| GluI | GCNGC | 7 cut(s) | 69, 81, 176, 449, 745, 748, 1212 |
| HaeIII | GGCC | 2 cut(s) | 302, 514 |
| HapII | CCGG | 1 cut(s) | 1127 |
| HhaI | GCGC | 1 cut(s) | 1170 |
| Hin1II | CATG | 9 cut(s) | 59, 89, 263, 383, 766, 811, 997, 1168, 1177 |
| Hin6I | GCGC | 1 cut(s) | 1168 |
| HinP1I | GCGC | 1 cut(s) | 1168 |
| HincII | GTYRAC | 2 cut(s) | 352, 823 |
| HindII | GTYRAC | 2 cut(s) | 352, 823 |
| HindIII | AAGCTT | 1 cut(s) | 441 |
| HinfI | GANTC | 3 cut(s) | 577, 967, 1014 |
| HpaII | CCGG | 1 cut(s) | 1127 |
| HphI | GGTGA | 4 cut(s) | 118, 275, 293, 1037 |
| Hpy166II | GTNNAC | 2 cut(s) | 352, 823 |
| Hpy188III | TCNNGA | 4 cut(s) | 33, 437, 1043, 1127 |
| Hpy8I | GTNNAC | 2 cut(s) | 352, 823 |
| HpyAV | CCTTC | 9 cut(s) | 58, 70, 103, 472, 544, 782, 784, 1171, 1221 |
| HpyCH4III | ACNGT | 3 cut(s) | 198, 313, 430 |
| HpyCH4IV | ACGT | 1 cut(s) | 953 |
| HpyCH4V | TGCA | 9 cut(s) | 83, 175, 539, 562, 587, 606, 842, 1070, 1211 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 77, 568 |
| HpyF3I | CTNAG | 3 cut(s) | 102, 795, 877 |
| HpySE526I | ACGT | 1 cut(s) | 953 |
| Hsp92II | CATG | 9 cut(s) | 59, 89, 263, 383, 766, 811, 997, 1168, 1177 |
| HspAI | GCGC | 1 cut(s) | 1168 |
| Kpn2I | TCCGGA | 1 cut(s) | 1126 |
| Kzo9I | GATC | 2 cut(s) | 997, 1161 |
| LmnI | GCTCC | 1 cut(s) | 1129 |
| Lsp1109I | GCAGC | 7 cut(s) | 55, 67, 187, 435, 734, 756, 1223 |
| LweI | GCATC | 2 cut(s) | 159, 478 |
| MabI | ACCWGGT | 1 cut(s) | 541 |
| MaeI | CTAG | 1 cut(s) | 245 |
| MaeII | ACGT | 1 cut(s) | 953 |
| MalI | GATC | 2 cut(s) | 999, 1163 |
| MboI | GATC | 2 cut(s) | 997, 1161 |
| MflI | RGATCY | 1 cut(s) | 997 |
| MhlI | GDGCHC | 1 cut(s) | 874 |
| MlsI | TGGCCA | 1 cut(s) | 302 |
| MluNI | TGGCCA | 1 cut(s) | 302 |
| MlyI | GAGTC | 1 cut(s) | 1008 |
| MmeI | TCCRAC | 2 cut(s) | 711, 884 |
| Mox20I | TGGCCA | 1 cut(s) | 302 |
| Mph1103I | ATGCAT | 1 cut(s) | 608 |
| MroI | TCCGGA | 1 cut(s) | 1126 |
| MroXI | GAANNNNTTC | 1 cut(s) | 984 |
| MscI | TGGCCA | 1 cut(s) | 302 |
| MseI | TTAA | 6 cut(s) | 134, 200, 593, 1004, 1056, 1255 |
| MslI | CAYNNNNRTG | 1 cut(s) | 837 |
| Msp20I | TGGCCA | 1 cut(s) | 302 |
| MspA1I | CMGCKG | 2 cut(s) | 747, 974 |
| MspI | CCGG | 1 cut(s) | 1127 |
| MspR9I | CCNGG | 1 cut(s) | 543 |
| Mva1269I | GAATGC | 1 cut(s) | 1122 |
| MvaI | CCWGG | 1 cut(s) | 543 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 77, 568 |
| NcoI | CCATGG | 2 cut(s) | 55, 379 |
| NdeII | GATC | 2 cut(s) | 997, 1161 |
| NlaIII | CATG | 9 cut(s) | 59, 89, 263, 383, 766, 811, 997, 1168, 1177 |
| NlaIV | GGNNCC | 4 cut(s) | 252, 521, 927, 999 |
| NmeAIII | GCCGAG | 1 cut(s) | 540 |
| NsiI | ATGCAT | 1 cut(s) | 608 |
| OliI | CACNNNNGTG | 1 cut(s) | 837 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 819 |
| PctI | GAATGC | 1 cut(s) | 1122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 984 |
| PfeI | GAWTC | 2 cut(s) | 577, 967 |
| PflFI | GACNNNGTC | 2 cut(s) | 809, 955 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 260, 1104 |
| PkrI | GCNGC | 7 cut(s) | 70, 82, 177, 450, 746, 749, 1213 |
| PleI | GAGTC | 1 cut(s) | 1008 |
| PpsI | GAGTC | 1 cut(s) | 1008 |
| PshAI | GACNNNNGTC | 1 cut(s) | 503 |
| Psp124BI | GAGCTC | 1 cut(s) | 874 |
| Psp6I | CCWGG | 1 cut(s) | 541 |
| PspGI | CCWGG | 1 cut(s) | 541 |
| PspN4I | GGNNCC | 4 cut(s) | 252, 521, 927, 999 |
| PspPI | GGNCC | 2 cut(s) | 659, 925 |
| PstNI | CAGNNNCTG | 1 cut(s) | 428 |
| PsuI | RGATCY | 1 cut(s) | 997 |
| PsyI | GACNNNGTC | 2 cut(s) | 809, 955 |
| PvuII | CAGCTG | 2 cut(s) | 747, 974 |
| RsaI | GTAC | 3 cut(s) | 195, 243, 258 |
| RsaNI | GTAC | 3 cut(s) | 194, 242, 257 |
| RseI | CAYNNNNRTG | 1 cut(s) | 837 |
| SacI | GAGCTC | 1 cut(s) | 874 |
| SalI | GTCGAC | 2 cut(s) | 350, 821 |
| SaqAI | TTAA | 6 cut(s) | 134, 200, 593, 1004, 1056, 1255 |
| SatI | GCNGC | 7 cut(s) | 69, 81, 176, 449, 745, 748, 1212 |
| Sau3AI | GATC | 2 cut(s) | 997, 1161 |
| Sau96I | GGNCC | 2 cut(s) | 659, 925 |
| SchI | GAGTC | 1 cut(s) | 1008 |
| ScrFI | CCNGG | 1 cut(s) | 543 |
| SduI | GDGCHC | 1 cut(s) | 874 |
| SexAI | ACCWGGT | 1 cut(s) | 541 |
| SfaNI | GCATC | 2 cut(s) | 159, 478 |
| SinI | GGWCC | 2 cut(s) | 659, 925 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 837 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| SsiI | CCGC | 3 cut(s) | 71, 409, 628 |
| SspI | AATATT | 1 cut(s) | 94 |
| SspMI | CTAG | 1 cut(s) | 245 |
| SstI | GAGCTC | 1 cut(s) | 874 |
| StyD4I | CCNGG | 1 cut(s) | 541 |
| StyI | CCWWGG | 2 cut(s) | 55, 379 |
| TaaI | ACNGT | 3 cut(s) | 198, 313, 430 |
| TaiI | ACGT | 1 cut(s) | 956 |
| TaqI | TCGA | 4 cut(s) | 153, 351, 575, 822 |
| TatI | WGTACW | 2 cut(s) | 241, 256 |
| TfiI | GAWTC | 2 cut(s) | 577, 967 |
| Tru1I | TTAA | 6 cut(s) | 134, 200, 593, 1004, 1056, 1255 |
| Tru9I | TTAA | 6 cut(s) | 134, 200, 593, 1004, 1056, 1255 |
| TscAI | CASTG | 2 cut(s) | 187, 352 |
| TseI | GCWGC | 7 cut(s) | 68, 80, 175, 448, 744, 747, 1211 |
| TspDTI | ATGAA | 6 cut(s) | 17, 156, 815, 883, 982, 1190 |
| TspGWI | ACGGA | 1 cut(s) | 990 |
| TspRI | CASTG | 2 cut(s) | 187, 352 |
| Tth111I | GACNNNGTC | 2 cut(s) | 809, 955 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 260, 1104 |
| VpaK11BI | GGWCC | 2 cut(s) | 659, 925 |
| XapI | RAATTY | 5 cut(s) | 15, 403, 735, 1058, 1198 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 295, 310, 653, 991 |
| XmiI | GTMKAC | 2 cut(s) | 351, 822 |
| XmnI | GAANNNNTTC | 1 cut(s) | 984 |
| XspI | CTAG | 1 cut(s) | 245 |
| Zsp2I | ATGCAT | 1 cut(s) | 608 |