Conserved oligomeric Golgi complex subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000605.1_g000001 Rmu_sc0000861.1_g000036 Rmu_sc0002886.1_g000005 Rmu_sc0007349.1_g000005 |
| rosa_rugosa | Rorug05G0367200 |
| rosa_samantha | Rh1BG158600 Rh1DG189500 Rh6CG415100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1714 |
| Acc65I | GGTACC | 1 cut(s) | 1806 |
| AccB1I | GGYRCC | 3 cut(s) | 56, 1806, 2384 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 53, 1594 |
| AccBSI | CCGCTC | 1 cut(s) | 1887 |
| AccI | GTMKAC | 4 cut(s) | 2316, 2438, 2559, 2569 |
| AciI | CCGC | 9 cut(s) | 126, 402, 851, 871, 931, 1088, 1325, 1885, 2025 |
| AclWI | GGATC | 3 cut(s) | 868, 881, 1648 |
| AcoI | YGGCCR | 2 cut(s) | 1827, 2022 |
| AcsI | RAATTY | 1 cut(s) | 2189 |
| AcuI | CTGAAG | 1 cut(s) | 2007 |
| AfaI | GTAC | 4 cut(s) | 196, 1179, 1808, 2216 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 53, 494, 1135, 1439, 1589, 1594, 1891, 2066 |
| AflII | CTTAAG | 1 cut(s) | 1900 |
| AflIII | ACRYGT | 1 cut(s) | 1330 |
| AjnI | CCWGG | 6 cut(s) | 437, 1144, 1156, 1411, 1713, 2387 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 78, 110, 1253, 1285, 2049, 2081 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2046, 2078 |
| AluBI | AGCT | 8 cut(s) | 452, 557, 745, 783, 1202, 1985, 2038, 2223 |
| AluI | AGCT | 8 cut(s) | 452, 557, 745, 783, 1202, 1985, 2038, 2223 |
| Alw21I | GWGCWC | 1 cut(s) | 1411 |
| Alw26I | GTCTC | 5 cut(s) | 488, 637, 765, 1046, 2172 |
| AlwI | GGATC | 3 cut(s) | 868, 881, 1648 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2003, 2306 |
| Ama87I | CYCGRG | 2 cut(s) | 1352, 2175 |
| AoxI | GGCC | 8 cut(s) | 772, 1012, 1097, 1277, 1320, 1827, 2022, 2489 |
| ApaI | GGGCCC | 1 cut(s) | 1324 |
| ApeKI | GCWGC | 4 cut(s) | 1505, 1994, 1997, 2248 |
| ApoI | RAATTY | 1 cut(s) | 2189 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2061 |
| Asp718I | GGTACC | 1 cut(s) | 1806 |
| AspS9I | GGNCC | 7 cut(s) | 667, 773, 928, 1126, 1320, 1321, 1348 |
| AsuHPI | GGTGA | 2 cut(s) | 1241, 2081 |
| AsuII | TTCGAA | 1 cut(s) | 28 |
| AvaI | CYCGRG | 2 cut(s) | 1352, 2175 |
| AvaII | GGWCC | 4 cut(s) | 667, 928, 1126, 1348 |
| AxyI | CCTNAGG | 2 cut(s) | 522, 1943 |
| BaeGI | GKGCMC | 2 cut(s) | 1026, 1324 |
| BalI | TGGCCA | 1 cut(s) | 1829 |
| BamHI | GGATCC | 1 cut(s) | 873 |
| BanI | GGYRCC | 3 cut(s) | 56, 1806, 2384 |
| BanII | GRGCYC | 2 cut(s) | 1186, 1324 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2207, 2239 |
| BauI | CACGAG | 1 cut(s) | 447 |
| BbsI | GAAGAC | 1 cut(s) | 11 |
| Bbv12I | GWGCWC | 1 cut(s) | 1411 |
| BbvCI | CCTCAGC | 2 cut(s) | 867, 2514 |
| BbvI | GCAGC | 4 cut(s) | 1492, 1981, 2009, 2235 |
| BccI | CCATC | 9 cut(s) | 363, 442, 690, 785, 1795, 1833, 2045, 2233, 2579 |
| BceAI | ACGGC | 2 cut(s) | 1244, 2261 |
| BciT130I | CCWGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| BcoDI | GTCTC | 5 cut(s) | 488, 637, 765, 1046, 2172 |
| BfaI | CTAG | 4 cut(s) | 636, 746, 956, 1418 |
| BfmI | CTRYAG | 1 cut(s) | 1995 |
| BfrI | CTTAAG | 1 cut(s) | 1900 |
| BfuAI | ACCTGC | 1 cut(s) | 1714 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1096, 2114 |
| BglII | AGATCT | 1 cut(s) | 1896 |
| BisI | GCNGC | 6 cut(s) | 402, 1506, 1995, 1998, 2025, 2249 |
| BlsI | GCNGC | 6 cut(s) | 403, 1507, 1996, 1999, 2026, 2250 |
| Bme1390I | CCNGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| Bme18I | GGWCC | 4 cut(s) | 667, 928, 1126, 1348 |
| BmeT110I | CYCGRG | 2 cut(s) | 1352, 2175 |
| BmgT120I | GGNCC | 7 cut(s) | 667, 773, 928, 1126, 1320, 1321, 1348 |
| BmrFI | CCNGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| BmrI | ACTGGG | 3 cut(s) | 354, 600, 1387 |
| BmsI | GCATC | 5 cut(s) | 265, 838, 1547, 1981, 2500 |
| BmuI | ACTGGG | 3 cut(s) | 354, 600, 1387 |
| BpiI | GAAGAC | 1 cut(s) | 11 |
| BpmI | CTGGAG | 2 cut(s) | 1167, 1836 |
| Bpu10I | CCTNAGC | 3 cut(s) | 867, 2157, 2514 |
| Bpu14I | TTCGAA | 1 cut(s) | 28 |
| BpuEI | CTTGAG | 1 cut(s) | 2449 |
| BsaI | GGTCTC | 1 cut(s) | 2172 |
| BsaJI | CCNNGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2046, 2076, 2117, 2147 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 53, 494, 1135, 1439, 1589, 1594, 1891, 2066 |
| Bse1I | ACTGG | 7 cut(s) | 154, 292, 360, 595, 1119, 1382, 1760 |
| Bse21I | CCTNAGG | 2 cut(s) | 522, 1943 |
| Bse3DI | GCAATG | 3 cut(s) | 1692, 2273, 2343 |
| BseBI | CCWGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| BseDI | CCNNGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| BseGI | GGATG | 8 cut(s) | 280, 355, 434, 701, 1803, 2056, 2515, 2536 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 53, 494, 1135, 1439, 1589, 1594, 1891, 2066 |
| BseMI | GCAATG | 3 cut(s) | 1692, 2273, 2343 |
| BseMII | CTCAG | 9 cut(s) | 513, 881, 900, 1079, 1528, 1731, 1934, 2472, 2505 |
| BseNI | ACTGG | 7 cut(s) | 154, 292, 360, 595, 1119, 1382, 1760 |
| BseRI | GAGGAG | 7 cut(s) | 52, 434, 510, 1301, 1619, 2138, 2141 |
| BseSI | GKGCMC | 2 cut(s) | 1026, 1324 |
| BseXI | GCAGC | 4 cut(s) | 1492, 1981, 2009, 2235 |
| BsgI | GTGCAG | 1 cut(s) | 361 |
| BshFI | GGCC | 8 cut(s) | 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491 |
| BshNI | GGYRCC | 3 cut(s) | 56, 1806, 2384 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1411 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1352, 2175 |
| BslFI | GGGAC | 4 cut(s) | 503, 680, 1456, 1945 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 53, 494, 1135, 1439, 1589, 1594, 1891, 2066 |
| BsmAI | GTCTC | 5 cut(s) | 488, 637, 765, 1046, 2172 |
| BsmFI | GGGAC | 4 cut(s) | 503, 680, 1456, 1945 |
| BsnI | GGCC | 8 cut(s) | 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491 |
| Bso31I | GGTCTC | 1 cut(s) | 2172 |
| BsoBI | CYCGRG | 2 cut(s) | 1352, 2175 |
| Bsp119I | TTCGAA | 1 cut(s) | 28 |
| Bsp120I | GGGCCC | 1 cut(s) | 1320 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1026, 1186, 1324, 1411 |
| Bsp1407I | TGTACA | 1 cut(s) | 2214 |
| Bsp143I | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| Bsp19I | CCATGG | 2 cut(s) | 924, 1588 |
| BspACI | CCGC | 9 cut(s) | 126, 402, 851, 871, 931, 1088, 1325, 1885, 2025 |
| BspANI | GGCC | 8 cut(s) | 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491 |
| BspCNI | CTCAG | 9 cut(s) | 514, 880, 901, 1078, 1527, 1732, 1935, 2473, 2506 |
| BspHI | TCATGA | 1 cut(s) | 763 |
| BspMAI | CTGCAG | 1 cut(s) | 1999 |
| BspMI | ACCTGC | 1 cut(s) | 1714 |
| BspPI | GGATC | 3 cut(s) | 868, 881, 1648 |
| BspQI | GCTCTTC | 1 cut(s) | 1146 |
| BspT104I | TTCGAA | 1 cut(s) | 28 |
| BspT107I | GGYRCC | 3 cut(s) | 56, 1806, 2384 |
| BspTI | CTTAAG | 1 cut(s) | 1900 |
| BspTNI | GGTCTC | 1 cut(s) | 2172 |
| BsrBI | CCGCTC | 1 cut(s) | 1887 |
| BsrDI | GCAATG | 3 cut(s) | 1692, 2273, 2343 |
| BsrGI | TGTACA | 1 cut(s) | 2214 |
| BsrI | ACTGG | 7 cut(s) | 154, 292, 360, 595, 1119, 1382, 1760 |
| BssECI | CCNNGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| BssMI | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| BssSI | CACGAG | 1 cut(s) | 447 |
| BssT1I | CCWWGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| Bst2BI | CACGAG | 1 cut(s) | 447 |
| Bst2UI | CCWGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| Bst6I | CTCTTC | 4 cut(s) | 8, 939, 1146, 1416 |
| BstAFI | CTTAAG | 1 cut(s) | 1900 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1505, 1729, 2003 |
| BstAUI | TGTACA | 1 cut(s) | 2214 |
| BstBI | TTCGAA | 1 cut(s) | 28 |
| BstC8I | GCNNGC | 3 cut(s) | 101, 1012, 2172 |
| BstDSI | CCRYGG | 2 cut(s) | 924, 1588 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 492, 1133 |
| BstF5I | GGATG | 8 cut(s) | 280, 355, 434, 701, 1803, 2056, 2515, 2536 |
| BstKTI | GATC | 4 cut(s) | 876, 1643, 1899, 2579 |
| BstMAI | GTCTC | 5 cut(s) | 488, 637, 765, 1046, 2172 |
| BstMBI | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| BstNI | CCWGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| BstNSI | RCATGY | 3 cut(s) | 471, 581, 1499 |
| BstSCI | CCNGG | 6 cut(s) | 437, 1144, 1156, 1411, 1713, 2387 |
| BstSFI | CTRYAG | 1 cut(s) | 1995 |
| BstSLI | GKGCMC | 2 cut(s) | 1026, 1324 |
| BstV1I | GCAGC | 4 cut(s) | 1492, 1981, 2009, 2235 |
| BstV2I | GAAGAC | 1 cut(s) | 11 |
| BstX2I | RGATCY | 3 cut(s) | 873, 1640, 1896 |
| BstYI | RGATCY | 3 cut(s) | 873, 1640, 1896 |
| Bsu36I | CCTNAGG | 2 cut(s) | 522, 1943 |
| BsuRI | GGCC | 8 cut(s) | 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491 |
| BtgI | CCRYGG | 2 cut(s) | 924, 1588 |
| BtsCI | GGATG | 8 cut(s) | 280, 355, 434, 701, 1803, 2056, 2515, 2536 |
| BtsI | GCAGTG | 1 cut(s) | 2432 |
| BtsIMutI | CAGTG | 8 cut(s) | 161, 588, 589, 628, 715, 1112, 1468, 2432 |
| BveI | ACCTGC | 1 cut(s) | 1714 |
| Cac8I | GCNNGC | 3 cut(s) | 101, 1012, 2172 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2003, 2306 |
| CciI | TCATGA | 1 cut(s) | 763 |
| Cfr13I | GGNCC | 7 cut(s) | 667, 773, 928, 1126, 1320, 1321, 1348 |
| CseI | GACGC | 1 cut(s) | 2466 |
| Csp6I | GTAC | 4 cut(s) | 195, 1178, 1807, 2215 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2325, 2360 |
| CviQI | GTAC | 4 cut(s) | 195, 1178, 1807, 2215 |
| DpnI | GATC | 4 cut(s) | 875, 1642, 1898, 2578 |
| DpnII | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| EaeI | YGGCCR | 2 cut(s) | 1827, 2022 |
| Eam1104I | CTCTTC | 4 cut(s) | 8, 939, 1146, 1416 |
| EarI | CTCTTC | 4 cut(s) | 8, 939, 1146, 1416 |
| EciI | GGCGGA | 1 cut(s) | 115 |
| Eco130I | CCWWGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| Eco24I | GRGCYC | 2 cut(s) | 1186, 1324 |
| Eco31I | GGTCTC | 1 cut(s) | 2172 |
| Eco47I | GGWCC | 4 cut(s) | 667, 928, 1126, 1348 |
| Eco57I | CTGAAG | 1 cut(s) | 2007 |
| Eco81I | CCTNAGG | 2 cut(s) | 522, 1943 |
| Eco88I | CYCGRG | 2 cut(s) | 1352, 2175 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 492, 1133 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1321, 1348 |
| EcoRII | CCWGG | 6 cut(s) | 437, 1144, 1156, 1411, 1713, 2387 |
| EcoT14I | CCWWGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| EcoT22I | ATGCAT | 1 cut(s) | 473 |
| EcoT38I | GRGCYC | 2 cut(s) | 1186, 1324 |
| ErhI | CCWWGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1413, 1445 |
| FaqI | GGGAC | 4 cut(s) | 503, 680, 1456, 1945 |
| FauI | CCCGC | 1 cut(s) | 1332 |
| FauNDI | CATATG | 1 cut(s) | 2496 |
| FblI | GTMKAC | 4 cut(s) | 2316, 2438, 2559, 2569 |
| Fnu4HI | GCNGC | 6 cut(s) | 402, 1506, 1995, 1998, 2025, 2249 |
| FokI | GGATG | 8 cut(s) | 287, 342, 421, 708, 1810, 2063, 2522, 2523 |
| FriOI | GRGCYC | 2 cut(s) | 1186, 1324 |
| Fsp4HI | GCNGC | 6 cut(s) | 402, 1506, 1995, 1998, 2025, 2249 |
| FspBI | CTAG | 4 cut(s) | 636, 746, 956, 1418 |
| GluI | GCNGC | 6 cut(s) | 402, 1506, 1995, 1998, 2025, 2249 |
| GsuI | CTGGAG | 2 cut(s) | 1167, 1836 |
| HaeIII | GGCC | 8 cut(s) | 774, 1014, 1099, 1279, 1322, 1829, 2024, 2491 |
| HgaI | GACGC | 1 cut(s) | 2466 |
| HincII | GTYRAC | 2 cut(s) | 2317, 2439 |
| HindII | GTYRAC | 2 cut(s) | 2317, 2439 |
| HindIII | AAGCTT | 2 cut(s) | 555, 2221 |
| HphI | GGTGA | 2 cut(s) | 1241, 2081 |
| Hpy166II | GTNNAC | 5 cut(s) | 2317, 2347, 2439, 2560, 2570 |
| Hpy188I | TCNGA | 6 cut(s) | 67, 878, 1517, 1838, 1882, 2482 |
| Hpy8I | GTNNAC | 5 cut(s) | 2317, 2347, 2439, 2560, 2570 |
| Hpy99I | CGWCG | 2 cut(s) | 137, 2577 |
| HpyAV | CCTTC | 5 cut(s) | 816, 873, 1475, 1527, 2107 |
| HpyCH4IV | ACGT | 3 cut(s) | 135, 1330, 2572 |
| HpySE526I | ACGT | 3 cut(s) | 135, 1330, 2572 |
| KpnI | GGTACC | 1 cut(s) | 1810 |
| Kzo9I | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| LguI | GCTCTTC | 1 cut(s) | 1146 |
| LmnI | GCTCC | 3 cut(s) | 497, 1148, 1414 |
| Lsp1109I | GCAGC | 4 cut(s) | 1492, 1981, 2009, 2235 |
| LweI | GCATC | 5 cut(s) | 265, 838, 1547, 1981, 2500 |
| MaeI | CTAG | 4 cut(s) | 636, 746, 956, 1418 |
| MaeII | ACGT | 3 cut(s) | 135, 1330, 2572 |
| MaeIII | GTNAC | 6 cut(s) | 584, 1068, 1600, 1937, 2269, 2396 |
| MalI | GATC | 4 cut(s) | 875, 1642, 1898, 2578 |
| MbiI | CCGCTC | 1 cut(s) | 1887 |
| MboI | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| MfeI | CAATTG | 1 cut(s) | 2375 |
| MflI | RGATCY | 3 cut(s) | 873, 1640, 1896 |
| MhlI | GDGCHC | 4 cut(s) | 1026, 1186, 1324, 1411 |
| MlsI | TGGCCA | 1 cut(s) | 1829 |
| MluNI | TGGCCA | 1 cut(s) | 1829 |
| MlyI | GAGTC | 4 cut(s) | 25, 863, 1597, 1806 |
| MmeI | TCCRAC | 4 cut(s) | 90, 1284, 2392, 2487 |
| Mox20I | TGGCCA | 1 cut(s) | 1829 |
| Mph1103I | ATGCAT | 1 cut(s) | 473 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2061 |
| MscI | TGGCCA | 1 cut(s) | 1829 |
| MseI | TTAA | 4 cut(s) | 212, 974, 1901, 2285 |
| MslI | CAYNNNNRTG | 1 cut(s) | 582 |
| Msp20I | TGGCCA | 1 cut(s) | 1829 |
| MspA1I | CMGCKG | 4 cut(s) | 783, 871, 1985, 2027 |
| MspCI | CTTAAG | 1 cut(s) | 1900 |
| MspR9I | CCNGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| MunI | CAATTG | 1 cut(s) | 2375 |
| MvaI | CCWGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| NcoI | CCATGG | 2 cut(s) | 924, 1588 |
| NdeI | CATATG | 1 cut(s) | 2496 |
| NdeII | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| NmeAIII | GCCGAG | 2 cut(s) | 134, 2134 |
| NmuCI | GTSAC | 3 cut(s) | 584, 1600, 1937 |
| NsiI | ATGCAT | 1 cut(s) | 473 |
| NspI | RCATGY | 3 cut(s) | 471, 581, 1499 |
| NspV | TTCGAA | 1 cut(s) | 28 |
| PaeR7I | CTCGAG | 1 cut(s) | 1352 |
| PagI | TCATGA | 1 cut(s) | 763 |
| PciSI | GCTCTTC | 1 cut(s) | 1146 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2061 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 53, 1594 |
| PfoI | TCCNGGA | 2 cut(s) | 1144, 1156 |
| PkrI | GCNGC | 6 cut(s) | 403, 1507, 1996, 1999, 2026, 2250 |
| PleI | GAGTC | 4 cut(s) | 24, 862, 1597, 1806 |
| PpsI | GAGTC | 4 cut(s) | 24, 862, 1597, 1806 |
| PpuMI | RGGWCCY | 1 cut(s) | 1348 |
| Psp5II | RGGWCCY | 1 cut(s) | 1348 |
| Psp6I | CCWGG | 6 cut(s) | 437, 1144, 1156, 1411, 1713, 2387 |
| PspGI | CCWGG | 6 cut(s) | 437, 1144, 1156, 1411, 1713, 2387 |
| PspOMI | GGGCCC | 1 cut(s) | 1320 |
| PspPI | GGNCC | 7 cut(s) | 667, 773, 928, 1126, 1320, 1321, 1348 |
| PspPPI | RGGWCCY | 1 cut(s) | 1348 |
| PstI | CTGCAG | 1 cut(s) | 1999 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2003, 2306 |
| PsuI | RGATCY | 3 cut(s) | 873, 1640, 1896 |
| PvuII | CAGCTG | 2 cut(s) | 783, 1985 |
| RsaI | GTAC | 4 cut(s) | 196, 1179, 1808, 2216 |
| RsaNI | GTAC | 4 cut(s) | 195, 1178, 1807, 2215 |
| RseI | CAYNNNNRTG | 1 cut(s) | 582 |
| SalI | GTCGAC | 2 cut(s) | 2315, 2437 |
| SapI | GCTCTTC | 1 cut(s) | 1146 |
| SaqAI | TTAA | 4 cut(s) | 212, 974, 1901, 2285 |
| SatI | GCNGC | 6 cut(s) | 402, 1506, 1995, 1998, 2025, 2249 |
| Sau3AI | GATC | 4 cut(s) | 873, 1640, 1896, 2576 |
| Sau96I | GGNCC | 7 cut(s) | 667, 773, 928, 1126, 1320, 1321, 1348 |
| SchI | GAGTC | 4 cut(s) | 25, 863, 1597, 1806 |
| ScrFI | CCNGG | 6 cut(s) | 439, 1146, 1158, 1413, 1715, 2389 |
| SduI | GDGCHC | 4 cut(s) | 1026, 1186, 1324, 1411 |
| SfaNI | GCATC | 5 cut(s) | 265, 838, 1547, 1981, 2500 |
| SfcI | CTRYAG | 1 cut(s) | 1995 |
| Sfr274I | CTCGAG | 1 cut(s) | 1352 |
| SfuI | TTCGAA | 1 cut(s) | 28 |
| SinI | GGWCC | 4 cut(s) | 667, 928, 1126, 1348 |
| SlaI | CTCGAG | 1 cut(s) | 1352 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 582 |
| SmlI | CTYRAG | 3 cut(s) | 1352, 1900, 2464 |
| SmoI | CTYRAG | 3 cut(s) | 1352, 1900, 2464 |
| SsiI | CCGC | 9 cut(s) | 126, 402, 851, 871, 931, 1088, 1325, 1885, 2025 |
| SspI | AATATT | 2 cut(s) | 823, 1975 |
| SspMI | CTAG | 4 cut(s) | 636, 746, 956, 1418 |
| StyD4I | CCNGG | 6 cut(s) | 437, 1144, 1156, 1411, 1713, 2387 |
| StyI | CCWWGG | 5 cut(s) | 488, 924, 1280, 1437, 1588 |
| TaiI | ACGT | 3 cut(s) | 138, 1333, 2575 |
| TaqII | GACCGA | 1 cut(s) | 684 |
| TatI | WGTACW | 1 cut(s) | 2214 |
| TauI | GCSGC | 2 cut(s) | 404, 2027 |
| Tru1I | TTAA | 4 cut(s) | 212, 974, 1901, 2285 |
| Tru9I | TTAA | 4 cut(s) | 212, 974, 1901, 2285 |
| TscAI | CASTG | 8 cut(s) | 161, 589, 595, 628, 715, 1119, 1468, 2432 |
| TseFI | GTSAC | 3 cut(s) | 584, 1600, 1937 |
| TseI | GCWGC | 4 cut(s) | 1505, 1994, 1997, 2248 |
| Tsp45I | GTSAC | 3 cut(s) | 584, 1600, 1937 |
| TspDTI | ATGAA | 8 cut(s) | 925, 990, 1261, 1503, 1862, 2202, 2285, 2525 |
| TspGWI | ACGGA | 1 cut(s) | 2540 |
| TspRI | CASTG | 8 cut(s) | 161, 589, 595, 628, 715, 1119, 1468, 2432 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 53, 1594 |
| Vha464I | CTTAAG | 1 cut(s) | 1900 |
| VpaK11BI | GGWCC | 4 cut(s) | 667, 928, 1126, 1348 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 492, 1133 |
| XapI | RAATTY | 1 cut(s) | 2189 |
| XbaI | TCTAGA | 1 cut(s) | 1417 |
| XceI | RCATGY | 3 cut(s) | 471, 581, 1499 |
| XhoI | CTCGAG | 1 cut(s) | 1352 |
| XmiI | GTMKAC | 4 cut(s) | 2316, 2438, 2559, 2569 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2061 |
| XspI | CTAG | 4 cut(s) | 636, 746, 956, 1418 |
| Zsp2I | ATGCAT | 1 cut(s) | 473 |