Rh6CG415100

Conserved oligomeric Golgi complex subunit

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
59987232 .. 59987423
192 bp
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UTR
Exon/CDS
Intron
Rh6CG415100.1

Sequence Viewer

Length: 192 bp
ATGAAAGCCTCCACCGCTGAGAAGCTCCAGCACACCATCCGCCACCCCAACCTCCTCTGCTCCATCAATGCCCTCACTCTCCAGCTCTCCAACCTCCACACCATCTCCAAGCTCCTCCACCACACCCTCCGCCTCTCCAAAAAGCTCCGCGACCTCGCCGTCGACCCTGAAAAGATTGAGCAGCAACCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.19

Weight (kDa)

9.74

Isoelectric Point (pI)

36.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 162
AccII CGCG 1 cut(s) 150
AciI CCGC 4 cut(s) 15, 40, 130, 148
AluBI AGCT 4 cut(s) 25, 85, 112, 145
AluI AGCT 4 cut(s) 25, 85, 112, 145
ApeKI GCWGC 1 cut(s) 181
BccI CCATC 3 cut(s) 44, 71, 110
BceAI ACGGC 1 cut(s) 143
BisI GCNGC 1 cut(s) 182
BlsI GCNGC 1 cut(s) 183
BpmI CTGGAG 2 cut(s) 11, 65
BsaXI ACNNNNNCTCC 2 cut(s) 89, 119
BseGI GGATG 1 cut(s) 36
BseMII CTCAG 1 cut(s) 9
BseRI GAGGAG 2 cut(s) 44, 104
Bsh1236I CGCG 1 cut(s) 150
BspACI CCGC 4 cut(s) 15, 40, 130, 148
BspCNI CTCAG 1 cut(s) 10
BspFNI CGCG 1 cut(s) 150
BstDEI CTNAG 1 cut(s) 18
BstF5I GGATG 1 cut(s) 36
BstFNI CGCG 1 cut(s) 150
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstUI CGCG 1 cut(s) 150
BtsCI GGATG 1 cut(s) 36
CviJI RGCY 5 cut(s) 8, 25, 85, 112, 145
CviKI_1 RGCY 5 cut(s) 8, 25, 85, 112, 145
DdeI CTNAG 1 cut(s) 18
DrdI GACNNNNNNGTC 1 cut(s) 158
DseDI GACNNNNNNGTC 1 cut(s) 158
EciI GGCGGA 2 cut(s) 29, 119
FblI GTMKAC 1 cut(s) 162
Fnu4HI GCNGC 1 cut(s) 182
FokI GGATG 1 cut(s) 23
Fsp4HI GCNGC 1 cut(s) 182
GluI GCNGC 1 cut(s) 182
GsuI CTGGAG 2 cut(s) 11, 65
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
Hpy166II GTNNAC 1 cut(s) 163
Hpy8I GTNNAC 1 cut(s) 163
Hpy99I CGWCG 1 cut(s) 164
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 1 cut(s) 18
LmnI GCTCC 4 cut(s) 30, 65, 117, 150
LpnPI CCDG 3 cut(s) 41, 95, 180
MmeI TCCRAC 1 cut(s) 114
MnlI CCTC 9 cut(s) 19, 62, 65, 83, 104, 125, 137, 143, 164
MspA1I CMGCKG 1 cut(s) 17
MvnI CGCG 1 cut(s) 150
MwoI GCNNNNNNNGC 1 cut(s) 14
PkrI GCNGC 1 cut(s) 183
SalI GTCGAC 1 cut(s) 161
SatI GCNGC 1 cut(s) 182
SetI ASST 7 cut(s) 27, 54, 87, 96, 114, 147, 156
SgeI CNNG 6 cut(s) 40, 94, 121, 161, 167, 179
SsiI CCGC 4 cut(s) 15, 40, 130, 148
TaqI TCGA 1 cut(s) 162
TseI GCWGC 1 cut(s) 181
TspDTI ATGAA 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.