Rorug05G0437300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0017556
Physical Location & Seq
Reverse (-)
60714763 .. 60718201
3439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0437300.1

Sequence Viewer

Length: 1788 bp
ATGGCCCGATTCCGGCAAGCGTTGGTGGATTGTGAGTTAATTGACATGGGATTCGTCGGTCCTAGGTTTACTTGGTCTAATAGGTTTACCAAGGAACGGCTGGATCGAGCTTGTCAAAATGTGCAATGGAGAGAACTTTACCCTTTTTCTAGATGTATAACTCTCCCTCTGAGTAGGTCTGATCACTGCCCTCTTCTCATTGAAGTGTCTCCGGAGCCAGCTGTTCGAACTCGAACACCTAAACTGTTTCGCTTTGAGGAGATGTGGTTACAGCATATGGACTGTTTGAATGTGGTTCAGCAAGGGTGGATGCTTCCAACTATAGGGGAACCAATGATGCAGGTTGGAAGGAAAATCAAACAGACAGGTCAACTATTATTACGTTGGCATTCTGGAGTGTTCCAACAAAGACAAACTGAGATGAAGCTGATTCAGGGAAAATTGGACGTCTTGATGAAACAGAGTTTCGAGCCCGGTCATTTTGATGTACAAAAGGTCCTACAGTTTCATCTCAATGAATTGCTTTCGGCTAATGAAGCGTATTGGAGGCAGAGATCTAGAGTACAGTGGCTCAAGGATGGGGATCGTAATACGGAGTTCTTCCATAGGAGAGCCTCTAATCACCAGTGTCGCAATCGGGTCAAAGGTTTACTTAATGCTGAAGGGCAGTGGACTGTTGATCAAGGAGAAGTTAATGAGTTAATCATAAAGTATTATGAAGACATTTTCAGGGCTGGTGGTTCTGACCCGGCAGCTATAGAAGCGGTTGCTGACTTGATCAACCCGGACACATGGACCTGGGATGAGACTGCTGTCCATACATGTTTTGAATCACAGGTGGCACACCAGGTTCTCTCTATCCCTCTTAGTCGTCCATATGGACAAGACCGAGTTGCTTGGAAGCTTCACAAGAAGGGTTTCTTTTCTGTGAAATCAGCGTATACAATAGCACGAGGCTTCTCTATTGGCAATGTGTTTGCCTCTCCTTCTAATGGGGATCCTTATGGTCCGGTTTGGAAAGCCTTGTGGAAGGCTAAAGTCCCTAGTAAGGTGGCTATTTTTGGGTGGAGAGCAGTCCATAATCTCCTGCCTACCCGTGCTGCATTATCTTTGAAGGGTTACAATGGGGACTTACAGTGTGTTGTCTGCTCTAGTGGTGTGGAGACAGTGGAACACCTATTCTGCCAATGTAGTTTGGCTAGAGAGATAGTGGGAGCTCCTCCCTTTATCATTCCGGTTTCCTCATTATCTTGGAAGGATTGGTTTTTAGAACGGGTTAACTCGATGTCATCAGATTGTTTTGATAAATTGCTTGTGTTGCTTTGGAATATTTGGAAGAATAGGAATGACAAGTTATGGAGAGATTGCTCTAAGACCGGTCCTAGCATCGTGGCCTCTTCTATGGCATCGTTTGAGGAGTATTCCCAGGTCAATCAGGCTACTGCATCTCTTGATCGGCGAGGACCTACGGGTCAAAAACGATGGTTTCCTCCAGCGACTCGTACCCTAAAATTGAATGTTGATGGTGCGTTCCTACCGTCGATTCAGTATGGAGGTACAGGGGGAGTTCTCAGGAATGATCACTGGGATTTTATTGCTGCCTTTTCCTACAGAGCTGAGTATGTGATCTCTCCATTACACGCTGAACTTTTAGCCTTGAAGTATGGGTTAGAATTCCTACACGCTATGAATGTCACGAAGGTGGTCGTGGAAACTGATTGTTTAGTGGCAGTTCAGGCCATTAATTCTTTGCCTGAGGATTTGTCTGAGCTAGGTGCTTTGATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

595

Amino Acids

67.86

Weight (kDa)

8.64

Isoelectric Point (pI)

35.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 308 - 403 8.6e-18 zinc-binding in reverse transcriptase
RVT_3 PF13456 506 - 594 3.4e-12 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017556)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13275
malus_domestica MD03G1039700.v1.1 MD11G1040400.v1.1
prunus_persica Prupe.6G032000_v2.0.a1
pyrus_communis pycom03g03060 pycom11g03490
rosa_chinensis RchiOBHm_Chr5g0075191
rosa_roxburghii Rroxscaffold_1G00006410 Rroxscaffold_1G00044420
rosa_rugosa Rorug05G0437300
rosa_wichuraiana Rw5G022900 Rw5G045860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1470
AatII GACGTC 1 cut(s) 450
Acc36I ACCTGC 1 cut(s) 331
AccI GTMKAC 1 cut(s) 941
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 1 cut(s) 764
AclWI GGATC 4 cut(s) 111, 591, 992, 1005
AcsI RAATTY 1 cut(s) 1673
AcuI CTGAAG 1 cut(s) 681
AcyI GRCGYC 1 cut(s) 447
AfaI GTAC 4 cut(s) 489, 564, 1504, 1558
AfiI CCNNNNNNNGG 5 cut(s) 12, 96, 323, 992, 1048
AflIII ACRYGT 1 cut(s) 821
AgeI ACCGGT 1 cut(s) 1376
AgsI TTSAA 6 cut(s) 203, 289, 830, 1114, 1516, 1660
AjnI CCWGG 3 cut(s) 797, 846, 1425
AleI CACNNNNGTG 1 cut(s) 1700
AluBI AGCT 8 cut(s) 110, 221, 427, 755, 904, 1217, 1616, 1771
AluI AGCT 8 cut(s) 110, 221, 427, 755, 904, 1217, 1616, 1771
Alw21I GWGCWC 1 cut(s) 1219
Alw26I GTCTC 3 cut(s) 213, 800, 1157
AlwI GGATC 4 cut(s) 111, 591, 992, 1005
Aor13HI TCCGGA 1 cut(s) 211
AoxI GGCC 3 cut(s) 3, 1392, 1737
ApeKI GCWGC 3 cut(s) 752, 1100, 1598
ApoI RAATTY 1 cut(s) 1673
ArsI GACNNNNNNTTYG 2 cut(s) 35, 67
AseI ATTAAT 1 cut(s) 1743
AsiGI ACCGGT 1 cut(s) 1376
Asp700I GAANNNNTTC 1 cut(s) 917
AspA2I CCTAGG 1 cut(s) 62
AspS9I GGNCC 7 cut(s) 4, 59, 496, 795, 1007, 1379, 1463
AsuC2I CCSGG 3 cut(s) 474, 749, 785
AsuHPI GGTGA 1 cut(s) 614
AsuII TTCGAA 1 cut(s) 226
AvaII GGWCC 6 cut(s) 59, 496, 795, 1007, 1379, 1463
AvrII CCTAGG 1 cut(s) 62
AxyI CCTNAGG 1 cut(s) 1755
BamHI GGATCC 1 cut(s) 997
BanII GRGCYC 2 cut(s) 474, 1219
BauI CACGAG 1 cut(s) 951
BbsI GAAGAC 1 cut(s) 726
Bbv12I GWGCWC 1 cut(s) 1219
BbvI GCAGC 3 cut(s) 764, 1087, 1585
BccI CCATC 3 cut(s) 572, 1476, 1517
BceAI ACGGC 1 cut(s) 113
BciT130I CCWGG 3 cut(s) 799, 848, 1427
BclI TGATCA 4 cut(s) 181, 679, 777, 1579
BcnI CCSGG 3 cut(s) 474, 749, 785
BcoDI GTCTC 3 cut(s) 213, 800, 1157
BfaI CTAG 8 cut(s) 63, 150, 558, 1044, 1152, 1200, 1383, 1772
BfmI CTRYAG 4 cut(s) 321, 500, 756, 1609
BfuAI ACCTGC 1 cut(s) 331
BglII AGATCT 1 cut(s) 554
BisI GCNGC 3 cut(s) 753, 1101, 1599
BlnI CCTAGG 1 cut(s) 62
BlsI GCNGC 3 cut(s) 754, 1102, 1600
Bme1390I CCNGG 6 cut(s) 474, 749, 785, 799, 848, 1427
Bme18I GGWCC 6 cut(s) 59, 496, 795, 1007, 1379, 1463
BmgT120I GGNCC 7 cut(s) 4, 59, 496, 795, 1007, 1379, 1463
BmiI GGNNCC 3 cut(s) 216, 330, 999
BmrFI CCNGG 6 cut(s) 474, 749, 785, 799, 848, 1427
BmrI ACTGGG 1 cut(s) 1594
BmsI GCATC 5 cut(s) 300, 327, 1395, 1415, 1454
BmuI ACTGGG 1 cut(s) 1594
BoxI GACNNNNGTC 1 cut(s) 812
BpiI GAAGAC 1 cut(s) 726
BpmI CTGGAG 2 cut(s) 414, 1476
Bpu14I TTCGAA 1 cut(s) 226
BpuEI CTTGAG 1 cut(s) 557
BpuMI CCSGG 3 cut(s) 474, 749, 785
BsaBI GATNNNNATC 1 cut(s) 582
BsaHI GRCGYC 1 cut(s) 447
BsaJI CCNNGG 4 cut(s) 62, 90, 798, 1425
BsaWI WCCGGW 4 cut(s) 211, 1009, 1234, 1376
BsaXI ACNNNNNCTCC 2 cut(s) 251, 281
Bsc4I CCNNNNNNNGG 5 cut(s) 12, 96, 323, 992, 1048
Bse118I RCCGGY 1 cut(s) 1376
Bse1I ACTGG 2 cut(s) 625, 1589
Bse21I CCTNAGG 1 cut(s) 1755
Bse3DI GCAATG 2 cut(s) 131, 976
Bse8I GATNNNNATC 1 cut(s) 582
BseAI TCCGGA 1 cut(s) 211
BseBI CCWGG 3 cut(s) 799, 848, 1427
BseDI CCNNGG 4 cut(s) 62, 90, 798, 1425
BseGI GGATG 3 cut(s) 315, 583, 808
BseJI GATNNNNATC 1 cut(s) 582
BseLI CCNNNNNNNGG 5 cut(s) 12, 96, 323, 992, 1048
BseMI GCAATG 2 cut(s) 131, 976
BseMII CTCAG 6 cut(s) 161, 408, 1585, 1608, 1746, 1758
BseNI ACTGG 2 cut(s) 625, 1589
BseRI GAGGAG 3 cut(s) 272, 1209, 1430
BseXI GCAGC 3 cut(s) 764, 1087, 1585
BshFI GGCC 3 cut(s) 5, 1394, 1739
BshTI ACCGGT 1 cut(s) 1376
BsiHKAI GWGCWC 1 cut(s) 1219
BsiSI CCGG 8 cut(s) 13, 212, 474, 749, 785, 1010, 1235, 1377
BslFI GGGAC 2 cut(s) 1025, 1142
BslI CCNNNNNNNGG 5 cut(s) 12, 96, 323, 992, 1048
BsmAI GTCTC 3 cut(s) 213, 800, 1157
BsmFI GGGAC 2 cut(s) 1025, 1142
BsmI GAATGC 1 cut(s) 388
BsnI GGCC 3 cut(s) 5, 1394, 1739
Bsp119I TTCGAA 1 cut(s) 226
Bsp1286I GDGCHC 2 cut(s) 474, 1219
Bsp13I TCCGGA 1 cut(s) 211
Bsp1407I TGTACA 1 cut(s) 487
BspACI CCGC 1 cut(s) 764
BspANI GGCC 3 cut(s) 5, 1394, 1739
BspCNI CTCAG 6 cut(s) 162, 409, 1584, 1609, 1747, 1759
BspEI TCCGGA 1 cut(s) 211
BspLI GGNNCC 3 cut(s) 216, 330, 999
BspMI ACCTGC 1 cut(s) 331
BspPI GGATC 4 cut(s) 111, 591, 992, 1005
BspT104I TTCGAA 1 cut(s) 226
BsrDI GCAATG 2 cut(s) 131, 976
BsrFI RCCGGY 1 cut(s) 1376
BsrGI TGTACA 1 cut(s) 487
BsrI ACTGG 2 cut(s) 625, 1589
BssAI RCCGGY 1 cut(s) 1376
BssECI CCNNGG 4 cut(s) 62, 90, 798, 1425
BssNAI GTATAC 1 cut(s) 942
BssNI GRCGYC 1 cut(s) 447
BssSI CACGAG 1 cut(s) 951
BssT1I CCWWGG 2 cut(s) 62, 90
Bst1107I GTATAC 1 cut(s) 942
Bst2BI CACGAG 1 cut(s) 951
Bst2UI CCWGG 3 cut(s) 799, 848, 1427
Bst4CI ACNGT 8 cut(s) 246, 284, 504, 567, 676, 1137, 1168, 1539
Bst6I CTCTTC 2 cut(s) 198, 1402
BstACI GRCGYC 1 cut(s) 447
BstAUI TGTACA 1 cut(s) 487
BstBI TTCGAA 1 cut(s) 226
BstC8I GCNNGC 2 cut(s) 18, 219
BstDEI CTNAG 8 cut(s) 170, 417, 866, 1371, 1571, 1617, 1755, 1767
BstF5I GGATG 3 cut(s) 315, 583, 808
BstMAI GTCTC 3 cut(s) 213, 800, 1157
BstMWI GCNNNNNNNGC 4 cut(s) 536, 761, 1318, 1736
BstNI CCWGG 3 cut(s) 799, 848, 1427
BstNSI RCATGY 1 cut(s) 825
BstPAI GACNNNNGTC 1 cut(s) 812
BstSCI CCNGG 6 cut(s) 472, 747, 783, 797, 846, 1425
BstSFI CTRYAG 4 cut(s) 321, 500, 756, 1609
BstV1I GCAGC 3 cut(s) 764, 1087, 1585
BstV2I GAAGAC 1 cut(s) 726
BstX2I RGATCY 2 cut(s) 554, 997
BstYI RGATCY 2 cut(s) 554, 997
BstZ17I GTATAC 1 cut(s) 942
Bsu36I CCTNAGG 1 cut(s) 1755
BsuRI GGCC 3 cut(s) 5, 1394, 1739
BtsCI GGATG 3 cut(s) 315, 583, 808
BtsI GCAGTG 2 cut(s) 184, 674
BtsIMutI CAGTG 7 cut(s) 184, 572, 632, 674, 1142, 1173, 1582
BveI ACCTGC 1 cut(s) 331
Cac8I GCNNGC 2 cut(s) 18, 219
Cfr10I RCCGGY 1 cut(s) 1376
Cfr13I GGNCC 7 cut(s) 4, 59, 496, 795, 1007, 1379, 1463
CsiI ACCWGGT 1 cut(s) 846
Csp6I GTAC 4 cut(s) 488, 563, 1503, 1557
CspAI ACCGGT 1 cut(s) 1376
CviAII CATG 3 cut(s) 46, 792, 822
CviQI GTAC 4 cut(s) 488, 563, 1503, 1557
DdeI CTNAG 8 cut(s) 170, 417, 866, 1371, 1571, 1617, 1755, 1767
DrdI GACNNNNNNGTC 1 cut(s) 1470
DseDI GACNNNNNNGTC 1 cut(s) 1470
Eam1104I CTCTTC 2 cut(s) 198, 1402
EarI CTCTTC 2 cut(s) 198, 1402
Ecl136II GAGCTC 1 cut(s) 1217
Eco130I CCWWGG 2 cut(s) 62, 90
Eco24I GRGCYC 2 cut(s) 474, 1219
Eco47I GGWCC 6 cut(s) 59, 496, 795, 1007, 1379, 1463
Eco53kI GAGCTC 1 cut(s) 1217
Eco57I CTGAAG 1 cut(s) 681
Eco81I CCTNAGG 1 cut(s) 1755
EcoICRI GAGCTC 1 cut(s) 1217
EcoO109I RGGNCCY 2 cut(s) 496, 1463
EcoRI GAATTC 1 cut(s) 1673
EcoRII CCWGG 3 cut(s) 797, 846, 1425
EcoT14I CCWWGG 2 cut(s) 62, 90
EcoT38I GRGCYC 2 cut(s) 474, 1219
ErhI CCWWGG 2 cut(s) 62, 90
FaeI CATG 3 cut(s) 49, 795, 825
FalI AAGNNNNNCTT 4 cut(s) 636, 668, 905, 937
FaqI GGGAC 2 cut(s) 1025, 1142
FatI CATG 3 cut(s) 45, 791, 821
FauNDI CATATG 2 cut(s) 276, 877
FbaI TGATCA 4 cut(s) 181, 679, 777, 1579
FblI GTMKAC 1 cut(s) 941
Fnu4HI GCNGC 3 cut(s) 753, 1101, 1599
FokI GGATG 3 cut(s) 322, 590, 815
FriOI GRGCYC 2 cut(s) 474, 1219
Fsp4HI GCNGC 3 cut(s) 753, 1101, 1599
FspBI CTAG 8 cut(s) 63, 150, 558, 1044, 1152, 1200, 1383, 1772
GluI GCNGC 3 cut(s) 753, 1101, 1599
GsuI CTGGAG 2 cut(s) 414, 1476
HaeIII GGCC 3 cut(s) 5, 1394, 1739
HapII CCGG 8 cut(s) 13, 212, 474, 749, 785, 1010, 1235, 1377
Hin1I GRCGYC 1 cut(s) 447
Hin1II CATG 3 cut(s) 49, 795, 825
HincII GTYRAC 2 cut(s) 371, 1279
HindII GTYRAC 2 cut(s) 371, 1279
HindIII AAGCTT 1 cut(s) 902
HinfI GANTC 6 cut(s) 9, 51, 430, 830, 1498, 1543
HpaI GTTAAC 1 cut(s) 1279
HpaII CCGG 8 cut(s) 13, 212, 474, 749, 785, 1010, 1235, 1377
HphI GGTGA 1 cut(s) 614
Hpy166II GTNNAC 7 cut(s) 69, 87, 371, 650, 672, 942, 1279
Hpy188I TCNGA 5 cut(s) 171, 181, 745, 1294, 1768
Hpy188III TCNNGA 8 cut(s) 150, 212, 393, 451, 558, 1451, 1573, 1696
Hpy8I GTNNAC 7 cut(s) 69, 87, 371, 650, 672, 942, 1279
Hpy99I CGWCG 2 cut(s) 59, 1543
HpyAV CCTTC 8 cut(s) 342, 656, 907, 996, 1024, 1108, 1249, 1693
HpyCH4III ACNGT 8 cut(s) 246, 284, 504, 567, 676, 1137, 1168, 1539
HpyCH4IV ACGT 2 cut(s) 382, 447
HpyCH4V TGCA 4 cut(s) 124, 340, 1103, 1445
HpyF10VI GCNNNNNNNGC 4 cut(s) 536, 761, 1318, 1736
HpyF3I CTNAG 8 cut(s) 170, 417, 866, 1371, 1571, 1617, 1755, 1767
HpySE526I ACGT 2 cut(s) 382, 447
Hsp92I GRCGYC 1 cut(s) 447
Hsp92II CATG 3 cut(s) 49, 795, 825
Kpn2I TCCGGA 1 cut(s) 211
Ksp22I TGATCA 4 cut(s) 181, 679, 777, 1579
KspAI GTTAAC 1 cut(s) 1279
LmnI GCTCC 3 cut(s) 214, 1214, 1222
Lsp1109I GCAGC 3 cut(s) 764, 1087, 1585
LweI GCATC 5 cut(s) 300, 327, 1395, 1415, 1454
MabI ACCWGGT 1 cut(s) 846
MaeI CTAG 8 cut(s) 63, 150, 558, 1044, 1152, 1200, 1383, 1772
MaeII ACGT 2 cut(s) 382, 447
MaeIII GTNAC 3 cut(s) 267, 1118, 1693
MboII GAAGA 5 cut(s) 185, 592, 731, 1348, 1389
MflI RGATCY 2 cut(s) 554, 997
MhlI GDGCHC 2 cut(s) 474, 1219
MluCI AATT 7 cut(s) 39, 440, 518, 1307, 1511, 1673, 1744
MlyI GAGTC 1 cut(s) 1492
MmeI TCCRAC 3 cut(s) 325, 341, 427
MroI TCCGGA 1 cut(s) 211
MroXI GAANNNNTTC 1 cut(s) 917
MseI TTAA 6 cut(s) 38, 654, 693, 701, 1278, 1743
MslI CAYNNNNRTG 4 cut(s) 203, 483, 513, 1700
MspA1I CMGCKG 1 cut(s) 221
MspI CCGG 8 cut(s) 13, 212, 474, 749, 785, 1010, 1235, 1377
MspR9I CCNGG 6 cut(s) 474, 749, 785, 799, 848, 1427
Mva1269I GAATGC 1 cut(s) 388
MvaI CCWGG 3 cut(s) 799, 848, 1427
MwoI GCNNNNNNNGC 4 cut(s) 536, 761, 1318, 1736
NciI CCSGG 3 cut(s) 474, 749, 785
NdeI CATATG 2 cut(s) 276, 877
NlaIII CATG 3 cut(s) 49, 795, 825
NlaIV GGNNCC 3 cut(s) 216, 330, 999
NmuCI GTSAC 1 cut(s) 1693
NspI RCATGY 1 cut(s) 825
NspV TTCGAA 1 cut(s) 226
OliI CACNNNNGTG 1 cut(s) 1700
PciI ACATGT 1 cut(s) 821
PcsI WCGNNNNNNNCGW 1 cut(s) 103
PctI GAATGC 1 cut(s) 388
PdmI GAANNNNTTC 1 cut(s) 917
PfeI GAWTC 5 cut(s) 9, 51, 430, 830, 1543
PinAI ACCGGT 1 cut(s) 1376
PkrI GCNGC 3 cut(s) 754, 1102, 1600
PleI GAGTC 1 cut(s) 1492
PpsI GAGTC 1 cut(s) 1492
PpuMI RGGWCCY 2 cut(s) 496, 1463
PscI ACATGT 1 cut(s) 821
PshAI GACNNNNGTC 1 cut(s) 812
PshBI ATTAAT 1 cut(s) 1743
Psp124BI GAGCTC 1 cut(s) 1219
Psp5II RGGWCCY 2 cut(s) 496, 1463
Psp6I CCWGG 3 cut(s) 797, 846, 1425
PspGI CCWGG 3 cut(s) 797, 846, 1425
PspN4I GGNNCC 3 cut(s) 216, 330, 999
PspPI GGNCC 7 cut(s) 4, 59, 496, 795, 1007, 1379, 1463
PspPPI RGGWCCY 2 cut(s) 496, 1463
PsuI RGATCY 2 cut(s) 554, 997
PvuII CAGCTG 1 cut(s) 221
RsaI GTAC 4 cut(s) 489, 564, 1504, 1558
RsaNI GTAC 4 cut(s) 488, 563, 1503, 1557
RseI CAYNNNNRTG 4 cut(s) 203, 483, 513, 1700
SacI GAGCTC 1 cut(s) 1219
SaqAI TTAA 6 cut(s) 38, 654, 693, 701, 1278, 1743
SatI GCNGC 3 cut(s) 753, 1101, 1599
Sau96I GGNCC 7 cut(s) 4, 59, 496, 795, 1007, 1379, 1463
SchI GAGTC 1 cut(s) 1492
ScrFI CCNGG 6 cut(s) 474, 749, 785, 799, 848, 1427
SduI GDGCHC 2 cut(s) 474, 1219
SexAI ACCWGGT 1 cut(s) 846
SfaNI GCATC 5 cut(s) 300, 327, 1395, 1415, 1454
SfcI CTRYAG 4 cut(s) 321, 500, 756, 1609
SfuI TTCGAA 1 cut(s) 226
SinI GGWCC 6 cut(s) 59, 496, 795, 1007, 1379, 1463
SmiMI CAYNNNNRTG 4 cut(s) 203, 483, 513, 1700
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
Sse9I AATT 7 cut(s) 39, 440, 518, 1307, 1511, 1673, 1744
SsiI CCGC 1 cut(s) 764
SspI AATATT 1 cut(s) 1330
SspMI CTAG 8 cut(s) 63, 150, 558, 1044, 1152, 1200, 1383, 1772
SstI GAGCTC 1 cut(s) 1219
StyD4I CCNGG 6 cut(s) 472, 747, 783, 797, 846, 1425
StyI CCWWGG 2 cut(s) 62, 90
TaaI ACNGT 8 cut(s) 246, 284, 504, 567, 676, 1137, 1168, 1539
TaiI ACGT 2 cut(s) 385, 450
TaqI TCGA 6 cut(s) 106, 226, 232, 468, 1283, 1541
TaqII GACCGA 2 cut(s) 47, 903
TasI AATT 7 cut(s) 39, 440, 518, 1307, 1511, 1673, 1744
TatI WGTACW 2 cut(s) 487, 562
TfiI GAWTC 5 cut(s) 9, 51, 430, 830, 1543
Tru1I TTAA 6 cut(s) 38, 654, 693, 701, 1278, 1743
Tru9I TTAA 6 cut(s) 38, 654, 693, 701, 1278, 1743
TscAI CASTG 7 cut(s) 191, 572, 632, 674, 1142, 1173, 1589
TseFI GTSAC 1 cut(s) 1693
TseI GCWGC 3 cut(s) 752, 1100, 1598
Tsp45I GTSAC 1 cut(s) 1693
TspDTI ATGAA 7 cut(s) 437, 470, 497, 531, 549, 732, 1703
TspGWI ACGGA 1 cut(s) 608
TspRI CASTG 7 cut(s) 191, 572, 632, 674, 1142, 1173, 1589
VpaK11BI GGWCC 6 cut(s) 59, 496, 795, 1007, 1379, 1463
VspI ATTAAT 1 cut(s) 1743
XapI RAATTY 1 cut(s) 1673
XbaI TCTAGA 2 cut(s) 149, 557
XceI RCATGY 1 cut(s) 825
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XmaJI CCTAGG 1 cut(s) 62
XmiI GTMKAC 1 cut(s) 941
XmnI GAANNNNTTC 1 cut(s) 917
XspI CTAG 8 cut(s) 63, 150, 558, 1044, 1152, 1200, 1383, 1772
ZraI GACGTC 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.