Rorug05G0598100

Phospholipase A-2-activating

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0009603
Physical Location & Seq
Reverse (-)
79613291 .. 79615630
2340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0598100.1

Sequence Viewer

Length: 1659 bp
ATGTCCGGAATGATGCTTCTGCTGCTGCTATGTCTCTCACTGGGGACAATTTCAGTCGTGCACTGTGGAGACCCTACCATAAACTTCGAATGGAATGTCACCCATGGAACCCTCTCTCCACTGGGAGTCCCACAGCAAGTCATTCTCATCAATGGCCAATTTCCTGGTCCCAACATTAATTCCACCACAAACAACAACGTAGTCTTGAACGTGTTCAATAACCTGGACGAGCCATTCCTTTTGACATGGAGTGGTATCCAGCAGAGGAAGAATTCATGGCAAGACGGAACACCTGGAACTATGTGCCCCATACCCGCGGGTAAGAACTTCACCTATCAGTTCCAGGTGAAGGATCAGATTGGCAGCTTTATATACTATCCAACAACTGCTATGCACAGGGCTGGCGGTGCATTCGGCGGTCTCCGCGTGAATAGTCGTCTAATGATCCCAGTTCCTTATGATACTCCGGAGGATGACTACACTGTCCTCATCGGGGACTGGTACACCAAAAGCCACAACGCTATCAAGAAACTACTTGACAGCGGTCGCAGTATGGCCAGGCCTGACGGTGTCCTCATCAACGGTAAAGATGCAAAGGGCGACGGTAAAGACGAGCCCCTCTTCACCATGAAAGCCGGCAAGACCTACAAGTATAGGATTTGCAATGTAGGTCTTAAGAACACCCTTAACTTTAGGATCCAAGAACACTGGATGACGTTAGTAGAGATGGAGGGCTCCCACACCGTCCAAAATACGTACCAGTCACTTGATGTGCATCTCGGGCAATGCATGGCGGTGCTAGTCACAGCTGACAAAGACCCCAAAGACTATTACATGGTAGCATCCACAAGATTCACCAAAAGCGTGCTCACCGGTAAGGGCATCATACGTTATGAAAATGGTAAGGGCCCTGCTGACCCCGAGCTCCCTGAGGCCCCAGAAGGATGGGCATGGTCTCTTAACCAGTTCCGCTCCTTCCGTTGGAATCTCACTGCTAGTGCTGCTAGACCTAATCCTCAGGGCTCCTACCACTACGGAAAGATTAACATCAGCCGCACCATCAGACTCGCCAACGCCGCATCCAAGGTGGATGGCAAGCTACGCTACTCTATAAACGGAGTCTCCCATGTGGACCCTGAAACCCCACTCAAGCTTGCTGAATACTATGGAGTGGGTGACAAGGTGTTCAAGACTGACACCATCAAGGATGAACCCCCAGAGGACGAGACCAAGGTAGAGGTCCATCCCAATGTTGTGAATCAAACCCACAGAGACTTTGTGGAGATTATCTTTGAGAACCACGAGAAGAGCCTCCAGACATGGCACGTGTCGGGATACGCCATCTTTGCCGTCGCCATCGAGCCAGGGAGATGGGACCCAGAAAAAAGGAAAAACTACAACCTTCTTGACGCTGTGAGCAGGCACACAATCCAAGTGTACCCCAAATCATGGGCTGCCATCATGACCTCATTCGACAACCCCGGAATGTGGAATATTAGGTCAGAACATCCGGAAAGGCGCTACCTAGGGCAACAACTCTATATCGCCGTTCCTAATCCTAGCCGTTCTACAAGGGACGAGTACAATATGCCAGACACCGCCCTGGTCTGCGGCATCGTTAAGGACATGCCCAAGCCGCCCCCACCTTACGGGAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001558 GO:0002237 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006082 GO:0006508 GO:0006511 GO:0006629 GO:0006631 GO:0006690 GO:0006692 GO:0006693 GO:0006807 GO:0006914 GO:0007275 GO:0007399 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009892 GO:0009987 GO:0010033 GO:0010517 GO:0010518 GO:0010605 GO:0010720 GO:0010975 GO:0010976 GO:0016236 GO:0019222 GO:0019538 GO:0019752 GO:0019941 GO:0022008 GO:0022603 GO:0022604 GO:0030154 GO:0030163 GO:0030307 GO:0030334 GO:0030335 GO:0031323 GO:0031324 GO:0031344 GO:0031346 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0032268 GO:0032269 GO:0032429 GO:0032430 GO:0032496 GO:0032501 GO:0032502 GO:0032787 GO:0032879 GO:0033559 GO:0033993 GO:0040008 GO:0040012 GO:0040017 GO:0042221 GO:0043085 GO:0043162 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044255 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044281 GO:0044424 GO:0044464 GO:0045202 GO:0045595 GO:0045597 GO:0045664 GO:0045666 GO:0045927 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051049 GO:0051050 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051246 GO:0051248 GO:0051270 GO:0051272 GO:0051336 GO:0051345 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0051960 GO:0051962 GO:0060191 GO:0060193 GO:0060255 GO:0060284 GO:0060341 GO:0061919 GO:0065007 GO:0065009 GO:0070887 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071396 GO:0071704 GO:0080090 GO:0098693 GO:0120035 GO:1900044 GO:1900045 GO:1901564 GO:1901565 GO:1901568 GO:1901575 GO:1901700 GO:1901701 GO:1902914 GO:1902915 GO:1903320 GO:1903321 GO:1903421 GO:1903423 GO:1903859 GO:1903861 GO:2000026 GO:2000145 GO:2000147 GO:2001222 GO:2001224
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
PFU PUL WD40

Protein Analysis

552

Amino Acids

62.02

Weight (kDa)

7.66

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 33 - 146 3.6e-39 Multicopper oxidase
Cu-oxidase PF00394 158 - 300 2.6e-41 Multicopper oxidase
Cu-oxidase_2 PF07731 381 - 520 1.4e-25 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 482
AccB7I CCANNNNNTGG 1 cut(s) 1449
AccBSI CCGCTC 1 cut(s) 972
AccII CGCG 2 cut(s) 317, 426
AccIII TCCGGA 3 cut(s) 5, 466, 1510
AclWI GGATC 4 cut(s) 360, 439, 691, 704
AcoI YGGCCR 2 cut(s) 154, 555
AcsI RAATTY 1 cut(s) 271
AcvI CACGTG 1 cut(s) 1327
AfaI GTAC 4 cut(s) 503, 758, 1439, 1583
AfiI CCNNNNNNNGG 6 cut(s) 349, 493, 981, 1449, 1488, 1649
AflII CTTAAG 1 cut(s) 674
AflIII ACRYGT 2 cut(s) 210, 1326
AgeI ACCGGT 1 cut(s) 872
AgsI TTSAA 3 cut(s) 208, 217, 1189
AjnI CCWGG 7 cut(s) 163, 222, 292, 342, 557, 1363, 1602
AloI GAACNNNNNNTCC 2 cut(s) 100, 132
AluBI AGCT 5 cut(s) 366, 809, 925, 1099, 1153
AluI AGCT 5 cut(s) 366, 809, 925, 1099, 1153
Alw21I GWGCWC 3 cut(s) 63, 870, 927
Alw26I GTCTC 7 cut(s) 38, 63, 425, 960, 1126, 1220, 1266
Alw44I GTGCAC 1 cut(s) 59
AlwI GGATC 4 cut(s) 360, 439, 691, 704
Ama87I CYCGRG 2 cut(s) 779, 920
Aor13HI TCCGGA 3 cut(s) 5, 466, 1510
AoxI GGCC 5 cut(s) 154, 555, 560, 907, 933
ApaI GGGCCC 1 cut(s) 911
ApaLI GTGCAC 1 cut(s) 59
ApeKI GCWGC 5 cut(s) 22, 25, 363, 1001, 1454
ApoI RAATTY 1 cut(s) 271
ArsI GACNNNNNNTTYG 2 cut(s) 81, 113
AseI ATTAAT 1 cut(s) 177
AsiGI ACCGGT 1 cut(s) 872
Asp700I GAANNNNTTC 1 cut(s) 212
AspA2I CCTAGG 1 cut(s) 1525
AspLEI GCGC 1 cut(s) 1521
AspS9I GGNCC 7 cut(s) 167, 907, 908, 934, 1132, 1240, 1375
AsuC2I CCSGG 1 cut(s) 1482
AsuHPI GGTGA 7 cut(s) 91, 322, 358, 616, 847, 862, 1187
AsuII TTCGAA 1 cut(s) 87
AvaI CYCGRG 2 cut(s) 779, 920
AvaII GGWCC 4 cut(s) 167, 1132, 1240, 1375
AvrII CCTAGG 1 cut(s) 1525
AxyI CCTNAGG 2 cut(s) 930, 1017
BaeGI GKGCMC 3 cut(s) 63, 308, 911
BalI TGGCCA 2 cut(s) 156, 557
BamHI GGATCC 1 cut(s) 696
BanII GRGCYC 5 cut(s) 618, 737, 911, 927, 1025
BauI CACGAG 1 cut(s) 1301
BbrPI CACGTG 1 cut(s) 1327
Bbv12I GWGCWC 3 cut(s) 63, 870, 927
BbvI GCAGC 5 cut(s) 9, 12, 375, 988, 1441
BceAI ACGGC 3 cut(s) 1334, 1532, 1548
BciT130I CCWGG 7 cut(s) 165, 224, 294, 344, 559, 1365, 1604
BciVI GTATCC 2 cut(s) 266, 1328
BcnI CCSGG 1 cut(s) 1482
BcoDI GTCTC 7 cut(s) 38, 63, 425, 960, 1126, 1220, 1266
BfaI CTAG 5 cut(s) 800, 996, 1005, 1526, 1560
BfoI RGCGCY 1 cut(s) 1522
BfrI CTTAAG 1 cut(s) 674
BfuI GTATCC 2 cut(s) 266, 1328
BisI GCNGC 9 cut(s) 23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
BlnI CCTAGG 1 cut(s) 1525
BlsI GCNGC 9 cut(s) 24, 27, 365, 1003, 1055, 1078, 1456, 1613, 1638
Bme1390I CCNGG 8 cut(s) 165, 224, 294, 344, 559, 1365, 1482, 1604
Bme18I GGWCC 4 cut(s) 167, 1132, 1240, 1375
BmeT110I CYCGRG 2 cut(s) 779, 920
BmgT120I GGNCC 7 cut(s) 167, 907, 908, 934, 1132, 1240, 1375
BmrFI CCNGG 8 cut(s) 165, 224, 294, 344, 559, 1365, 1482, 1604
BmrI ACTGGG 3 cut(s) 50, 131, 443
BmsI GCATC 7 cut(s) 3, 580, 784, 851, 891, 1088, 1623
BmuI ACTGGG 3 cut(s) 50, 131, 443
BoxI GACNNNNGTC 1 cut(s) 543
BpmI CTGGAG 1 cut(s) 1298
Bpu14I TTCGAA 1 cut(s) 87
BpuEI CTTGAG 1 cut(s) 1133
BpuMI CCSGG 1 cut(s) 1482
BsaAI YACGTR 2 cut(s) 756, 1327
BsaBI GATNNNNATC 2 cut(s) 774, 1046
BsaI GGTCTC 4 cut(s) 63, 425, 960, 1220
BsaJI CCNNGG 8 cut(s) 103, 315, 1083, 1230, 1364, 1480, 1525, 1602
BsaWI WCCGGW 4 cut(s) 5, 466, 872, 1510
BsaXI ACNNNNNCTCC 4 cut(s) 100, 130, 1106, 1136
Bsc4I CCNNNNNNNGG 6 cut(s) 349, 493, 981, 1449, 1488, 1649
Bse118I RCCGGY 2 cut(s) 635, 872
Bse1I ACTGG 7 cut(s) 45, 126, 449, 503, 713, 760, 964
Bse21I CCTNAGG 2 cut(s) 930, 1017
Bse3DI GCAATG 2 cut(s) 670, 791
Bse8I GATNNNNATC 2 cut(s) 774, 1046
BseAI TCCGGA 3 cut(s) 5, 466, 1510
BseBI CCWGG 7 cut(s) 165, 224, 294, 344, 559, 1365, 1604
BseDI CCNNGG 8 cut(s) 103, 315, 1083, 1230, 1364, 1480, 1525, 1602
BseGI GGATG 9 cut(s) 478, 717, 842, 950, 1079, 1096, 1213, 1243, 1507
BseJI GATNNNNATC 2 cut(s) 774, 1046
BseLI CCNNNNNNNGG 6 cut(s) 349, 493, 981, 1449, 1488, 1649
BseMI GCAATG 2 cut(s) 670, 791
BseMII CTCAG 2 cut(s) 921, 1031
BseNI ACTGG 7 cut(s) 45, 126, 449, 503, 713, 760, 964
BseSI GKGCMC 3 cut(s) 63, 308, 911
BseXI GCAGC 5 cut(s) 9, 12, 375, 988, 1441
Bsh1236I CGCG 2 cut(s) 317, 426
Bsh1285I CGRYCG 1 cut(s) 547
BshFI GGCC 5 cut(s) 156, 557, 562, 909, 935
BshTI ACCGGT 1 cut(s) 872
BsiEI CGRYCG 1 cut(s) 547
BsiHKAI GWGCWC 3 cut(s) 63, 870, 927
BsiHKCI CYCGRG 2 cut(s) 779, 920
BsiSI CCGG 6 cut(s) 6, 467, 636, 873, 1482, 1511
BslFI GGGAC 6 cut(s) 58, 113, 153, 509, 1388, 1589
BslI CCNNNNNNNGG 6 cut(s) 349, 493, 981, 1449, 1488, 1649
BsmAI GTCTC 7 cut(s) 38, 63, 425, 960, 1126, 1220, 1266
BsmFI GGGAC 6 cut(s) 58, 113, 153, 509, 1388, 1589
BsmI GAATGC 1 cut(s) 410
BsnI GGCC 5 cut(s) 156, 557, 562, 909, 935
Bso31I GGTCTC 4 cut(s) 63, 425, 960, 1220
BsoBI CYCGRG 2 cut(s) 779, 920
Bsp119I TTCGAA 1 cut(s) 87
Bsp120I GGGCCC 1 cut(s) 907
Bsp1286I GDGCHC 8 cut(s) 63, 308, 618, 737, 870, 911, 927, 1025
Bsp13I TCCGGA 3 cut(s) 5, 466, 1510
Bsp143I GATC 3 cut(s) 352, 444, 696
Bsp19I CCATGG 1 cut(s) 103
BspANI GGCC 5 cut(s) 156, 557, 562, 909, 935
BspCNI CTCAG 2 cut(s) 922, 1030
BspEI TCCGGA 3 cut(s) 5, 466, 1510
BspFNI CGCG 2 cut(s) 317, 426
BspHI TCATGA 1 cut(s) 1461
BspPI GGATC 4 cut(s) 360, 439, 691, 704
BspQI GCTCTTC 1 cut(s) 1301
BspT104I TTCGAA 1 cut(s) 87
BspTI CTTAAG 1 cut(s) 674
BspTNI GGTCTC 4 cut(s) 63, 425, 960, 1220
BsrBI CCGCTC 1 cut(s) 972
BsrDI GCAATG 2 cut(s) 670, 791
BsrFI RCCGGY 2 cut(s) 635, 872
BsrI ACTGG 7 cut(s) 45, 126, 449, 503, 713, 760, 964
BssAI RCCGGY 2 cut(s) 635, 872
BssECI CCNNGG 8 cut(s) 103, 315, 1083, 1230, 1364, 1480, 1525, 1602
BssMI GATC 3 cut(s) 352, 444, 696
BssSI CACGAG 1 cut(s) 1301
BssT1I CCWWGG 4 cut(s) 103, 1083, 1230, 1525
Bst2BI CACGAG 1 cut(s) 1301
Bst2UI CCWGG 7 cut(s) 165, 224, 294, 344, 559, 1365, 1604
Bst4CI ACNGT 6 cut(s) 65, 484, 569, 584, 605, 745
Bst6I CTCTTC 2 cut(s) 626, 1301
BstAFI CTTAAG 1 cut(s) 674
BstBAI YACGTR 2 cut(s) 756, 1327
BstBI TTCGAA 1 cut(s) 87
BstC8I GCNNGC 6 cut(s) 403, 637, 866, 1097, 1155, 1421
BstDEI CTNAG 2 cut(s) 930, 1017
BstDSI CCRYGG 2 cut(s) 103, 315
BstF5I GGATG 9 cut(s) 478, 717, 842, 950, 1079, 1096, 1213, 1243, 1507
BstFNI CGCG 2 cut(s) 317, 426
BstH2I RGCGCY 1 cut(s) 1522
BstHHI GCGC 1 cut(s) 1521
BstKTI GATC 3 cut(s) 355, 447, 699
BstMAI GTCTC 7 cut(s) 38, 63, 425, 960, 1126, 1220, 1266
BstMBI GATC 3 cut(s) 352, 444, 696
BstMCI CGRYCG 1 cut(s) 547
BstMWI GCNNNNNNNGC 9 cut(s) 22, 407, 423, 781, 1001, 1076, 1101, 1346, 1636
BstNI CCWGG 7 cut(s) 165, 224, 294, 344, 559, 1365, 1604
BstNSI RCATGY 1 cut(s) 1630
BstPAI GACNNNNGTC 1 cut(s) 543
BstSCI CCNGG 8 cut(s) 163, 222, 292, 342, 557, 1363, 1480, 1602
BstSLI GKGCMC 3 cut(s) 63, 308, 911
BstSNI TACGTA 1 cut(s) 756
BstUI CGCG 2 cut(s) 317, 426
BstV1I GCAGC 5 cut(s) 9, 12, 375, 988, 1441
BstX2I RGATCY 1 cut(s) 696
BstXI CCANNNNNNTGG 3 cut(s) 164, 945, 1371
BstYI RGATCY 1 cut(s) 696
Bsu36I CCTNAGG 2 cut(s) 930, 1017
BsuI GTATCC 2 cut(s) 266, 1328
BsuRI GGCC 5 cut(s) 156, 557, 562, 909, 935
BtgI CCRYGG 2 cut(s) 103, 315
BtsCI GGATG 9 cut(s) 478, 717, 842, 950, 1079, 1096, 1213, 1243, 1507
BtsI GCAGTG 1 cut(s) 990
BtsIMutI CAGTG 6 cut(s) 38, 61, 119, 480, 706, 990
Cac8I GCNNGC 6 cut(s) 403, 637, 866, 1097, 1155, 1421
CciI TCATGA 1 cut(s) 1461
CfoI GCGC 1 cut(s) 1521
Cfr10I RCCGGY 2 cut(s) 635, 872
Cfr13I GGNCC 7 cut(s) 167, 907, 908, 934, 1132, 1240, 1375
Cfr42I CCGCGG 1 cut(s) 318
CseI GACGC 1 cut(s) 1418
Csp6I GTAC 4 cut(s) 502, 757, 1438, 1582
CspAI ACCGGT 1 cut(s) 872
CviQI GTAC 4 cut(s) 502, 757, 1438, 1582
DdeI CTNAG 2 cut(s) 930, 1017
DpnI GATC 3 cut(s) 354, 446, 698
DpnII GATC 3 cut(s) 352, 444, 696
DrdI GACNNNNNNGTC 1 cut(s) 482
DseDI GACNNNNNNGTC 1 cut(s) 482
EaeI YGGCCR 2 cut(s) 154, 555
Eam1104I CTCTTC 2 cut(s) 626, 1301
EarI CTCTTC 2 cut(s) 626, 1301
Ecl136II GAGCTC 1 cut(s) 925
Eco105I TACGTA 1 cut(s) 756
Eco130I CCWWGG 4 cut(s) 103, 1083, 1230, 1525
Eco147I AGGCCT 1 cut(s) 562
Eco24I GRGCYC 5 cut(s) 618, 737, 911, 927, 1025
Eco31I GGTCTC 4 cut(s) 63, 425, 960, 1220
Eco47I GGWCC 4 cut(s) 167, 1132, 1240, 1375
Eco53kI GAGCTC 1 cut(s) 925
Eco72I CACGTG 1 cut(s) 1327
Eco81I CCTNAGG 2 cut(s) 930, 1017
Eco88I CYCGRG 2 cut(s) 779, 920
EcoICRI GAGCTC 1 cut(s) 925
EcoO109I RGGNCCY 4 cut(s) 907, 908, 934, 1375
EcoRI GAATTC 1 cut(s) 271
EcoRII CCWGG 7 cut(s) 163, 222, 292, 342, 557, 1363, 1602
EcoT14I CCWWGG 4 cut(s) 103, 1083, 1230, 1525
EcoT22I ATGCAT 1 cut(s) 791
EcoT38I GRGCYC 5 cut(s) 618, 737, 911, 927, 1025
ErhI CCWWGG 4 cut(s) 103, 1083, 1230, 1525
FaqI GGGAC 6 cut(s) 58, 113, 153, 509, 1388, 1589
FauI CCCGC 2 cut(s) 310, 322
Fnu4HI GCNGC 9 cut(s) 23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
FokI GGATG 9 cut(s) 485, 724, 829, 957, 1066, 1103, 1220, 1230, 1494
FriOI GRGCYC 5 cut(s) 618, 737, 911, 927, 1025
Fsp4HI GCNGC 9 cut(s) 23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
FspBI CTAG 5 cut(s) 800, 996, 1005, 1526, 1560
GlaI GCGC 1 cut(s) 1520
GluI GCNGC 9 cut(s) 23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
GsuI CTGGAG 1 cut(s) 1298
HaeII RGCGCY 1 cut(s) 1522
HaeIII GGCC 5 cut(s) 156, 557, 562, 909, 935
HapII CCGG 6 cut(s) 6, 467, 636, 873, 1482, 1511
HgaI GACGC 1 cut(s) 1418
HhaI GCGC 1 cut(s) 1521
Hin6I GCGC 1 cut(s) 1519
HinP1I GCGC 1 cut(s) 1519
HindIII AAGCTT 1 cut(s) 1151
HinfI GANTC 6 cut(s) 126, 852, 985, 1065, 1119, 1258
HpaII CCGG 6 cut(s) 6, 467, 636, 873, 1482, 1511
HphI GGTGA 7 cut(s) 91, 322, 358, 616, 847, 862, 1187
Hpy166II GTNNAC 4 cut(s) 61, 504, 1132, 1438
Hpy188I TCNGA 3 cut(s) 357, 1064, 1504
Hpy8I GTNNAC 4 cut(s) 61, 504, 1132, 1438
Hpy99I CGWCG 2 cut(s) 605, 1355
HpyAV CCTTC 4 cut(s) 343, 935, 985, 1412
HpyCH4III ACNGT 6 cut(s) 65, 484, 569, 584, 605, 745
HpyCH4IV ACGT 6 cut(s) 198, 210, 716, 755, 889, 1326
HpyCH4V TGCA 7 cut(s) 61, 394, 410, 593, 663, 775, 789
HpyF10VI GCNNNNNNNGC 9 cut(s) 22, 407, 423, 781, 1001, 1076, 1101, 1346, 1636
HpyF3I CTNAG 2 cut(s) 930, 1017
HpySE526I ACGT 6 cut(s) 198, 210, 716, 755, 889, 1326
HspAI GCGC 1 cut(s) 1519
KflI GGGWCCC 1 cut(s) 1375
Kpn2I TCCGGA 3 cut(s) 5, 466, 1510
KroI GCCGGC 1 cut(s) 635
KroNI GCCGGC 1 cut(s) 637
KspI CCGCGG 1 cut(s) 318
Kzo9I GATC 3 cut(s) 352, 444, 696
LguI GCTCTTC 1 cut(s) 1301
LmnI GCTCC 4 cut(s) 740, 930, 977, 1028
Lsp1109I GCAGC 5 cut(s) 9, 12, 375, 988, 1441
LweI GCATC 7 cut(s) 3, 580, 784, 851, 891, 1088, 1623
MaeI CTAG 5 cut(s) 800, 996, 1005, 1526, 1560
MaeII ACGT 6 cut(s) 198, 210, 716, 755, 889, 1326
MaeIII GTNAC 4 cut(s) 97, 762, 802, 1175
MalI GATC 3 cut(s) 354, 446, 698
MbiI CCGCTC 1 cut(s) 972
MboI GATC 3 cut(s) 352, 444, 696
MboII GAAGA 3 cut(s) 280, 613, 1318
MflI RGATCY 1 cut(s) 696
MhlI GDGCHC 8 cut(s) 63, 308, 618, 737, 870, 911, 927, 1025
MlsI TGGCCA 2 cut(s) 156, 557
MluCI AATT 4 cut(s) 48, 158, 178, 271
MluNI TGGCCA 2 cut(s) 156, 557
MlyI GAGTC 3 cut(s) 135, 1059, 1128
MmeI TCCRAC 2 cut(s) 404, 962
Mox20I TGGCCA 2 cut(s) 156, 557
Mph1103I ATGCAT 1 cut(s) 791
MroI TCCGGA 3 cut(s) 5, 466, 1510
MroNI GCCGGC 1 cut(s) 635
MroXI GAANNNNTTC 1 cut(s) 212
MscI TGGCCA 2 cut(s) 156, 557
MseI TTAA 6 cut(s) 177, 675, 687, 960, 1044, 1620
MslI CAYNNNNRTG 2 cut(s) 794, 1248
Msp20I TGGCCA 2 cut(s) 156, 557
MspA1I CMGCKG 3 cut(s) 317, 543, 809
MspCI CTTAAG 1 cut(s) 674
MspI CCGG 6 cut(s) 6, 467, 636, 873, 1482, 1511
MspR9I CCNGG 8 cut(s) 165, 224, 294, 344, 559, 1365, 1482, 1604
Mva1269I GAATGC 1 cut(s) 410
MvaI CCWGG 7 cut(s) 165, 224, 294, 344, 559, 1365, 1604
MvnI CGCG 2 cut(s) 317, 426
MwoI GCNNNNNNNGC 9 cut(s) 22, 407, 423, 781, 1001, 1076, 1101, 1346, 1636
NaeI GCCGGC 1 cut(s) 637
NciI CCSGG 1 cut(s) 1482
NcoI CCATGG 1 cut(s) 103
NdeII GATC 3 cut(s) 352, 444, 696
NgoMIV GCCGGC 1 cut(s) 635
NmuCI GTSAC 4 cut(s) 97, 762, 802, 1175
NsiI ATGCAT 1 cut(s) 791
NspI RCATGY 1 cut(s) 1630
NspV TTCGAA 1 cut(s) 87
PagI TCATGA 1 cut(s) 1461
PceI AGGCCT 1 cut(s) 562
PciSI GCTCTTC 1 cut(s) 1301
PcsI WCGNNNNNNNCGW 1 cut(s) 609
PctI GAATGC 1 cut(s) 410
PdiI GCCGGC 1 cut(s) 637
PdmI GAANNNNTTC 1 cut(s) 212
PfeI GAWTC 3 cut(s) 852, 985, 1258
PflFI GACNNNGTC 1 cut(s) 569
PflMI CCANNNNNTGG 1 cut(s) 1449
PinAI ACCGGT 1 cut(s) 872
PkrI GCNGC 9 cut(s) 24, 27, 365, 1003, 1055, 1078, 1456, 1613, 1638
PleI GAGTC 3 cut(s) 134, 1059, 1127
PmaCI CACGTG 1 cut(s) 1327
PmlI CACGTG 1 cut(s) 1327
PpsI GAGTC 3 cut(s) 134, 1059, 1127
Ppu21I YACGTR 2 cut(s) 756, 1327
PpuMI RGGWCCY 1 cut(s) 1375
PshAI GACNNNNGTC 1 cut(s) 543
PshBI ATTAAT 1 cut(s) 177
Psp124BI GAGCTC 1 cut(s) 927
Psp5II RGGWCCY 1 cut(s) 1375
Psp6I CCWGG 7 cut(s) 163, 222, 292, 342, 557, 1363, 1602
PspCI CACGTG 1 cut(s) 1327
PspGI CCWGG 7 cut(s) 163, 222, 292, 342, 557, 1363, 1602
PspOMI GGGCCC 1 cut(s) 907
PspPI GGNCC 7 cut(s) 167, 907, 908, 934, 1132, 1240, 1375
PspPPI RGGWCCY 1 cut(s) 1375
PsuI RGATCY 1 cut(s) 696
PsyI GACNNNGTC 1 cut(s) 569
PvuII CAGCTG 1 cut(s) 809
RsaI GTAC 4 cut(s) 503, 758, 1439, 1583
RsaNI GTAC 4 cut(s) 502, 757, 1438, 1582
RseI CAYNNNNRTG 2 cut(s) 794, 1248
SacI GAGCTC 1 cut(s) 927
SacII CCGCGG 1 cut(s) 318
SapI GCTCTTC 1 cut(s) 1301
SaqAI TTAA 6 cut(s) 177, 675, 687, 960, 1044, 1620
SatI GCNGC 9 cut(s) 23, 26, 364, 1002, 1054, 1077, 1455, 1612, 1637
Sau3AI GATC 3 cut(s) 352, 444, 696
Sau96I GGNCC 7 cut(s) 167, 907, 908, 934, 1132, 1240, 1375
SchI GAGTC 3 cut(s) 135, 1059, 1128
ScrFI CCNGG 8 cut(s) 165, 224, 294, 344, 559, 1365, 1482, 1604
SduI GDGCHC 8 cut(s) 63, 308, 618, 737, 870, 911, 927, 1025
SfaNI GCATC 7 cut(s) 3, 580, 784, 851, 891, 1088, 1623
Sfr303I CCGCGG 1 cut(s) 318
SfuI TTCGAA 1 cut(s) 87
SgrBI CCGCGG 1 cut(s) 318
SinI GGWCC 4 cut(s) 167, 1132, 1240, 1375
SmiMI CAYNNNNRTG 2 cut(s) 794, 1248
SmlI CTYRAG 2 cut(s) 674, 1148
SmoI CTYRAG 2 cut(s) 674, 1148
SnaBI TACGTA 1 cut(s) 756
Sse9I AATT 4 cut(s) 48, 158, 178, 271
SseBI AGGCCT 1 cut(s) 562
SspI AATATT 1 cut(s) 1495
SspMI CTAG 5 cut(s) 800, 996, 1005, 1526, 1560
SstI GAGCTC 1 cut(s) 927
StuI AGGCCT 1 cut(s) 562
StyD4I CCNGG 8 cut(s) 163, 222, 292, 342, 557, 1363, 1480, 1602
StyI CCWWGG 4 cut(s) 103, 1083, 1230, 1525
TaaI ACNGT 6 cut(s) 65, 484, 569, 584, 605, 745
TaiI ACGT 6 cut(s) 201, 213, 719, 758, 892, 1329
TaqI TCGA 3 cut(s) 87, 1359, 1473
TasI AATT 4 cut(s) 48, 158, 178, 271
TatI WGTACW 1 cut(s) 1581
TauI GCSGC 4 cut(s) 1056, 1079, 1614, 1639
TfiI GAWTC 3 cut(s) 852, 985, 1258
Tru1I TTAA 6 cut(s) 177, 675, 687, 960, 1044, 1620
Tru9I TTAA 6 cut(s) 177, 675, 687, 960, 1044, 1620
TscAI CASTG 6 cut(s) 45, 68, 126, 487, 713, 997
TseFI GTSAC 4 cut(s) 97, 762, 802, 1175
TseI GCWGC 5 cut(s) 22, 25, 363, 1001, 1454
Tsp45I GTSAC 4 cut(s) 97, 762, 802, 1175
TspDTI ATGAA 4 cut(s) 264, 644, 909, 1224
TspGWI ACGGA 4 cut(s) 300, 968, 1050, 1131
TspRI CASTG 6 cut(s) 45, 68, 126, 487, 713, 997
Tth111I GACNNNGTC 1 cut(s) 569
Van91I CCANNNNNTGG 1 cut(s) 1449
Vha464I CTTAAG 1 cut(s) 674
VneI GTGCAC 1 cut(s) 59
VpaK11BI GGWCC 4 cut(s) 167, 1132, 1240, 1375
VspI ATTAAT 1 cut(s) 177
XapI RAATTY 1 cut(s) 271
XceI RCATGY 1 cut(s) 1630
XmaJI CCTAGG 1 cut(s) 1525
XmnI GAANNNNTTC 1 cut(s) 212
XspI CTAG 5 cut(s) 800, 996, 1005, 1526, 1560
Zsp2I ATGCAT 1 cut(s) 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.