Rorug06G0077200

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0014414
Physical Location & Seq
Forward (+)
10261328 .. 10266143
4816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0077200.1

Sequence Viewer

Length: 1965 bp
ATGGCGCAAGCTCAGGTTCAGGGTCAGAATGCGAACGCGGCGGCGGCGGCGGCTGCGGCGGCGGCTAATGGTGGTGGGGCCAACCAGTTCGTGACGACGTCGCTTTACGTTGGGGATCTCGACCAGAACATTACGGATTCGCAGCTGTACGACCTGTTCAACCAGCTGGGTCAGGTCGTGTCTGTTAGGGTTTGCAGGGACTTGTCCACCCGGAGGTCGCTTGGTTACGGCTATGTCAATTATAGCAACCCGCAGGACGCTGCTAGGGCATTGGATGTGTTGAACTTCACTCCTGTAAATGGAAGGCCCATTAGGATCATGTACTCTCACCGTGATCCTAGTATTCGTAAAAGTGGGGCTGGAAATATATTTATTAAGAATTTGGACAAAGCTCTTGATCACAAAGCCTTGCATGATACATTTTCTTCATTCGGAAACATCCTTTCTTGCAAGGTGGCAACAGACTCCTCTGGCCAGTCAAAGGGCTATGGCTTTGTGCAATTTGATAATGATGAAGCTGCCCACAAAGCTATTGCGAAGTTGAATGGTATGCTTATAAATGATAAGCAAGTTTTTGTAGGACCATTCCTCCGCAAGCAGGAAAGGGAGGGTGTTGCTGACAAGTCAAAATTCCAGAATGTTTATGTGAAGAATCTATCAGAATCGACTACTGAAGATGATTTTACCAAAATTTTTGGTGAATTTGGACCAATCACTAGCGTAGTGATCATGAGAGATCAAGATGGAAAATCAAAGTGCTTTGGATTTGTCAACTTTGATAATCCAGATGATGCTGCCAGAGCTGTTGAGGCTCTGAATGGAAAGAAATTTGATGATAAGGAGTGGTATGTTGGGAAGGCCCAGAAGAAATCTGAAAGGGAAAATGAATTGAAACTTCGATTTGAACAGAGCATGAAAGAGGCAGCAGACAAATATCAAGGAGCAAACTTGTATGTTAAAAATTTAGATGATAGCATAGTTGATGATAAACTTAAGGAGCTCTTCACTCCATTTGGCACAATTACCTCGTGTAAGGTCATGCGAGACCCCAACGGAGTAAGTAGGGGTTCCGGTTTTGTTGCATTCTCAACTCCTGAAGAGGCAAATAGAGCTCTGGCGGAGATGAATGGAAAAATGATTGTAAGCAAACCTCTCTATGTTGCACTTGCGCAACGAAAAGAAGATAGAAGAGCGAGGCTCCAGGCTCAGTTTTCTCAAATGCGGCCAGTTCCAATGGCACCTTCAGTTGCTCCTCGTATGCCAATGTACCCTCCTGGTGGTCCAGGTATTGGGCAGCAAATATTCTATGGTCAAGCCCCACCTGCTATCATTCCCTCCCAGCCTGGATTTGGATATCAGCAGCAACTTGTTCCTGGTATGAGACCTGGCGGCGCTCCCATGCCAAACTTCTTTGTGCCAATGGTTCAGCAGGGGCAGCAAGGGCAGCGCCCTGGTGGCAGACGTGCAGGCCCTGCGCAGCAAAACCAACAACCAGTTCCATTAATGCAACAGCAGATGCTTCCAAGAGGGCGTGTCTACCGTTACCCGTCTGGGCGCGCTCTGCCTGATGGTCCCATGCCTGGTGTTGCTGGAGGCATGTTTTCTGTTCCATATGACTTGTCTGGCATGCCATTGCGTGATCCAGCACTGTCTCAGCCTGTTCCAATTGGGACTTTGGCTAGTGCCCTTGCAAATGCTACACCGGAGCAGCAAAGGACGATGCTGGGGGAGAATCTTTACCCACTGGTGGAACAGCTGGAACCTGACAATGCAGCGAAGGTTACTGGCATGCTTCTTGAGATGGATCAAACTGAGGTTCTGCATTTGCTCGAGTCACCTGAAGCTTTGAAAGCAAAGGTAGCTGAAGCTATGGAGGTTCTGAGGAATGTTGCTCAGCAGCAGCAAGCTGGCGGTGCAGCTGATCAACTAGCCTCATTGTCGCTCAATGATAATCTTGTTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

654

Amino Acids

71.23

Weight (kDa)

8.38

Isoelectric Point (pI)

38.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 35 - 105 1.3e-19 RNA recognition motif
RRM_1 PF00076 123 - 190 2.7e-20 RNA recognition motif
RRM_1 PF00076 214 - 282 1.4e-24 RNA recognition motif
RRM_1 PF00076 317 - 385 1.9e-19 RNA recognition motif
MLLE PF00658 562 - 627 4.3e-30 MLLE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014414)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71780
fragaria_vesca FvH4_2g12791
malus_domestica MD05G1036200.v1.1 MD10G1038300.v1.1
prunus_persica Prupe.8G044500_v2.0.a1 Prupe.8G044500_v2.0.a1
pyrus_communis pycom10g02630
rosa_chinensis RchiOBHm_Chr6g0273681
rosa_laevigata RLG00000013600
rosa_multiflora Rmu_sc0021426.1_g000002
rosa_roxburghii Rroxscaffold_7G00195130
rosa_rugosa Rorug06G0077200
rosa_samantha Rh6AG191500 Rh6BG195600 Rh6CG195100 Rh6DG186900
rosa_wichuraiana Rw6G016760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 557
AarI CACCTGC 1 cut(s) 1330
AatII GACGTC 1 cut(s) 101
Acc16I TGCGCA 2 cut(s) 1170, 1476
Acc36I ACCTGC 1 cut(s) 1330
AccB1I GGYRCC 1 cut(s) 1237
AccB7I CCANNNNNTGG 1 cut(s) 1289
AccI GTMKAC 1 cut(s) 1536
AccII CGCG 2 cut(s) 38, 1557
AclWI GGATC 5 cut(s) 123, 323, 329, 1634, 1812
AcoI YGGCCR 2 cut(s) 472, 1223
AcsI RAATTY 6 cut(s) 379, 629, 690, 701, 827, 961
AcuI CTGAAG 5 cut(s) 693, 1116, 1227, 1860, 1884
AcyI GRCGYC 1 cut(s) 98
AfaI GTAC 3 cut(s) 149, 323, 1268
AfiI CCNNNNNNNGG 9 cut(s) 213, 299, 481, 598, 1277, 1289, 1349, 1580, 1747
AflII CTTAAG 1 cut(s) 992
AgsI TTSAA 6 cut(s) 160, 283, 544, 892, 905, 1849
AjiI CACGTC 1 cut(s) 1463
AjnI CCWGG 8 cut(s) 1200, 1273, 1282, 1342, 1372, 1384, 1450, 1579
AjuI GAANNNNNNNTTGG 4 cut(s) 1225, 1257, 1479, 1511
Alw21I GWGCWC 2 cut(s) 1002, 1114
Alw26I GTCTC 3 cut(s) 1038, 1375, 1656
AlwI GGATC 5 cut(s) 123, 323, 329, 1634, 1812
AlwNI CAGNNNCTG 1 cut(s) 1472
Ama87I CYCGRG 1 cut(s) 1829
AoxI GGCC 6 cut(s) 78, 305, 472, 858, 1223, 1468
ApoI RAATTY 6 cut(s) 379, 629, 690, 701, 827, 961
AseI ATTAAT 1 cut(s) 1502
AspLEI GCGC 7 cut(s) 7, 1171, 1394, 1449, 1477, 1557, 1559
AspS9I GGNCC 8 cut(s) 78, 306, 581, 707, 859, 1280, 1469, 1571
AsuC2I CCSGG 1 cut(s) 211
AsuHPI GGTGA 3 cut(s) 320, 710, 1827
AvaI CYCGRG 1 cut(s) 1829
AvaII GGWCC 4 cut(s) 581, 707, 1280, 1571
BaeGI GKGCMC 1 cut(s) 1687
BalI TGGCCA 1 cut(s) 474
BanI GGYRCC 1 cut(s) 1237
BanII GRGCYC 2 cut(s) 1002, 1114
BauI CACGAG 1 cut(s) 1027
Bbv12I GWGCWC 2 cut(s) 1002, 1114
BccI CCATC 3 cut(s) 737, 1562, 1795
BceAI ACGGC 1 cut(s) 244
BciT130I CCWGG 8 cut(s) 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
BclI TGATCA 3 cut(s) 397, 726, 1921
BcnI CCSGG 1 cut(s) 211
BcoDI GTCTC 3 cut(s) 1038, 1375, 1656
BfaI CTAG 5 cut(s) 264, 339, 717, 1680, 1928
BfoI RGCGCY 2 cut(s) 1395, 1450
BfrI CTTAAG 1 cut(s) 992
BfuAI ACCTGC 1 cut(s) 1330
BglI GCCNNNNNGGC 1 cut(s) 1455
BlpI GCTNAGC 1 cut(s) 1893
Bme1390I CCNGG 9 cut(s) 211, 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
Bme18I GGWCC 4 cut(s) 581, 707, 1280, 1571
BmeT110I CYCGRG 1 cut(s) 1829
BmgBI CACGTC 1 cut(s) 1463
BmgT120I GGNCC 8 cut(s) 78, 306, 581, 707, 859, 1280, 1469, 1571
BmiI GGNNCC 6 cut(s) 79, 1069, 1199, 1239, 1573, 1761
BmrFI CCNGG 9 cut(s) 211, 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
BmsI GCATC 3 cut(s) 781, 1506, 1710
BplI GAGNNNNNCTC 2 cut(s) 1182, 1214
BpmI CTGGAG 2 cut(s) 1184, 1611
Bpu10I CCTNAGC 1 cut(s) 12
Bpu1102I GCTNAGC 1 cut(s) 1893
BpuEI CTTGAG 1 cut(s) 1817
BpuMI CCSGG 1 cut(s) 211
BsaHI GRCGYC 1 cut(s) 98
BsaI GGTCTC 2 cut(s) 1038, 1375
BsaJI CCNNGG 1 cut(s) 1450
BsaWI WCCGGW 2 cut(s) 1070, 1702
BsaXI ACNNNNNCTCC 2 cut(s) 573, 603
Bsc4I CCNNNNNNNGG 9 cut(s) 213, 299, 481, 598, 1277, 1289, 1349, 1580, 1747
Bse1I ACTGG 6 cut(s) 85, 475, 1226, 1493, 1749, 1789
Bse3DI GCAATG 1 cut(s) 1631
BseBI CCWGG 8 cut(s) 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
BseDI CCNNGG 1 cut(s) 1450
BseGI GGATG 2 cut(s) 280, 438
BseLI CCNNNNNNNGG 9 cut(s) 213, 299, 481, 598, 1277, 1289, 1349, 1580, 1747
BseMI GCAATG 1 cut(s) 1631
BseMII CTCAG 6 cut(s) 26, 1220, 1667, 1803, 1871, 1907
BseNI ACTGG 6 cut(s) 85, 475, 1226, 1493, 1749, 1789
BsePI GCGCGC 1 cut(s) 1555
BseRI GAGGAG 2 cut(s) 457, 1242
BseSI GKGCMC 1 cut(s) 1687
BseYI CCCAGC 3 cut(s) 166, 1338, 1723
BsgI GTGCAG 2 cut(s) 1485, 1935
Bsh1236I CGCG 2 cut(s) 38, 1557
BshFI GGCC 6 cut(s) 80, 307, 474, 860, 1225, 1470
BshNI GGYRCC 1 cut(s) 1237
BsiHKAI GWGCWC 2 cut(s) 1002, 1114
BsiHKCI CYCGRG 1 cut(s) 1829
BsiSI CCGG 3 cut(s) 211, 1071, 1703
BslFI GGGAC 3 cut(s) 212, 1557, 1684
BslI CCNNNNNNNGG 9 cut(s) 213, 299, 481, 598, 1277, 1289, 1349, 1580, 1747
BsmAI GTCTC 3 cut(s) 1038, 1375, 1656
BsmFI GGGAC 3 cut(s) 212, 1557, 1684
BsmI GAATGC 2 cut(s) 34, 1082
BsnI GGCC 6 cut(s) 80, 307, 474, 860, 1225, 1470
Bso31I GGTCTC 2 cut(s) 1038, 1375
BsoBI CYCGRG 1 cut(s) 1829
Bsp1286I GDGCHC 3 cut(s) 1002, 1114, 1687
Bsp143I GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
Bsp1720I GCTNAGC 1 cut(s) 1893
BspANI GGCC 6 cut(s) 80, 307, 474, 860, 1225, 1470
BspCNI CTCAG 6 cut(s) 25, 1219, 1666, 1804, 1872, 1906
BspFNI CGCG 2 cut(s) 38, 1557
BspHI TCATGA 1 cut(s) 729
BspLI GGNNCC 6 cut(s) 79, 1069, 1199, 1239, 1573, 1761
BspMI ACCTGC 1 cut(s) 1330
BspPI GGATC 5 cut(s) 123, 323, 329, 1634, 1812
BspQI GCTCTTC 2 cut(s) 1007, 1183
BspT107I GGYRCC 1 cut(s) 1237
BspTI CTTAAG 1 cut(s) 992
BspTNI GGTCTC 2 cut(s) 1038, 1375
BsrDI GCAATG 1 cut(s) 1631
BsrI ACTGG 6 cut(s) 85, 475, 1226, 1493, 1749, 1789
BssECI CCNNGG 1 cut(s) 1450
BssHII GCGCGC 1 cut(s) 1555
BssMI GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
BssNI GRCGYC 1 cut(s) 98
BssSI CACGAG 1 cut(s) 1027
Bst2BI CACGAG 1 cut(s) 1027
Bst2UI CCWGG 8 cut(s) 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
Bst4CI ACNGT 3 cut(s) 332, 1541, 1650
Bst6I CTCTTC 3 cut(s) 1007, 1092, 1183
BstACI GRCGYC 1 cut(s) 98
BstAFI CTTAAG 1 cut(s) 992
BstAPI GCANNNNNTGC 1 cut(s) 1472
BstC8I GCNNGC 8 cut(s) 9, 596, 1468, 1557, 1628, 1790, 1905, 1909
BstDEI CTNAG 6 cut(s) 12, 1206, 1653, 1812, 1880, 1893
BstF5I GGATG 2 cut(s) 280, 438
BstFNI CGCG 2 cut(s) 38, 1557
BstH2I RGCGCY 2 cut(s) 1395, 1450
BstHHI GCGC 7 cut(s) 7, 1171, 1394, 1449, 1477, 1557, 1559
BstKTI GATC 9 cut(s) 118, 318, 337, 400, 729, 739, 1642, 1807, 1924
BstMAI GTCTC 3 cut(s) 1038, 1375, 1656
BstMBI GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
BstNI CCWGG 8 cut(s) 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
BstNSI RCATGY 3 cut(s) 1600, 1630, 1792
BstSCI CCNGG 9 cut(s) 209, 1200, 1273, 1282, 1342, 1372, 1384, 1450, 1579
BstSLI GKGCMC 1 cut(s) 1687
BstUI CGCG 2 cut(s) 38, 1557
BstX2I RGATCY 1 cut(s) 115
BstYI RGATCY 1 cut(s) 115
BsuRI GGCC 6 cut(s) 80, 307, 474, 860, 1225, 1470
BtrI CACGTC 1 cut(s) 1463
BtsCI GGATG 2 cut(s) 280, 438
BtsIMutI CAGTG 2 cut(s) 1646, 1742
BveI ACCTGC 1 cut(s) 1330
Cac8I GCNNGC 8 cut(s) 9, 596, 1468, 1557, 1628, 1790, 1905, 1909
CaiI CAGNNNCTG 1 cut(s) 1472
CciI TCATGA 1 cut(s) 729
CfoI GCGC 7 cut(s) 7, 1171, 1394, 1449, 1477, 1557, 1559
Cfr13I GGNCC 8 cut(s) 78, 306, 581, 707, 859, 1280, 1469, 1571
CseI GACGC 1 cut(s) 266
Csp6I GTAC 3 cut(s) 148, 322, 1267
CviQI GTAC 3 cut(s) 148, 322, 1267
DdeI CTNAG 6 cut(s) 12, 1206, 1653, 1812, 1880, 1893
DpnI GATC 9 cut(s) 117, 317, 336, 399, 728, 738, 1641, 1806, 1923
DpnII GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
EaeI YGGCCR 2 cut(s) 472, 1223
Eam1104I CTCTTC 3 cut(s) 1007, 1092, 1183
EarI CTCTTC 3 cut(s) 1007, 1092, 1183
EciI GGCGGA 1 cut(s) 1133
Ecl136II GAGCTC 2 cut(s) 1000, 1112
Eco24I GRGCYC 2 cut(s) 1002, 1114
Eco31I GGTCTC 2 cut(s) 1038, 1375
Eco32I GATATC 1 cut(s) 1355
Eco47I GGWCC 4 cut(s) 581, 707, 1280, 1571
Eco53kI GAGCTC 2 cut(s) 1000, 1112
Eco57I CTGAAG 5 cut(s) 693, 1116, 1227, 1860, 1884
Eco88I CYCGRG 1 cut(s) 1829
EcoICRI GAGCTC 2 cut(s) 1000, 1112
EcoO109I RGGNCCY 1 cut(s) 1469
EcoRII CCWGG 8 cut(s) 1200, 1273, 1282, 1342, 1372, 1384, 1450, 1579
EcoRV GATATC 1 cut(s) 1355
EcoT38I GRGCYC 2 cut(s) 1002, 1114
FalI AAGNNNNNCTT 2 cut(s) 986, 1018
FaqI GGGAC 3 cut(s) 212, 1557, 1684
FauI CCCGC 1 cut(s) 258
FauNDI CATATG 1 cut(s) 1612
FbaI TGATCA 3 cut(s) 397, 726, 1921
FblI GTMKAC 1 cut(s) 1536
FokI GGATG 2 cut(s) 287, 425
FriOI GRGCYC 2 cut(s) 1002, 1114
FspBI CTAG 5 cut(s) 264, 339, 717, 1680, 1928
FspI TGCGCA 2 cut(s) 1170, 1476
GlaI GCGC 7 cut(s) 6, 1170, 1393, 1448, 1476, 1556, 1558
GsaI CCCAGC 3 cut(s) 170, 1342, 1727
GsuI CTGGAG 2 cut(s) 1184, 1611
HaeII RGCGCY 2 cut(s) 1395, 1450
HaeIII GGCC 6 cut(s) 80, 307, 474, 860, 1225, 1470
HapII CCGG 3 cut(s) 211, 1071, 1703
HgaI GACGC 1 cut(s) 266
HhaI GCGC 7 cut(s) 7, 1171, 1394, 1449, 1477, 1557, 1559
Hin1I GRCGYC 1 cut(s) 98
Hin6I GCGC 7 cut(s) 5, 1169, 1392, 1447, 1475, 1555, 1557
HinP1I GCGC 7 cut(s) 5, 1169, 1392, 1447, 1475, 1555, 1557
HincII GTYRAC 1 cut(s) 772
HindII GTYRAC 1 cut(s) 772
HindIII AAGCTT 1 cut(s) 1842
HinfI GANTC 6 cut(s) 137, 464, 652, 662, 1732, 1832
HpaII CCGG 3 cut(s) 211, 1071, 1703
HphI GGTGA 3 cut(s) 320, 710, 1827
Hpy166II GTNNAC 3 cut(s) 207, 772, 1537
Hpy188I TCNGA 6 cut(s) 27, 434, 661, 816, 874, 1881
Hpy8I GTNNAC 3 cut(s) 207, 772, 1537
Hpy99I CGWCG 2 cut(s) 100, 103
HpyAV CCTTC 4 cut(s) 297, 850, 1251, 1771
HpyCH4III ACNGT 3 cut(s) 332, 1541, 1650
HpyCH4IV ACGT 3 cut(s) 98, 108, 1462
HpyF3I CTNAG 6 cut(s) 12, 1206, 1653, 1812, 1880, 1893
HpySE526I ACGT 3 cut(s) 98, 108, 1462
Hsp92I GRCGYC 1 cut(s) 98
HspAI GCGC 7 cut(s) 5, 1169, 1392, 1447, 1475, 1555, 1557
Ksp22I TGATCA 3 cut(s) 397, 726, 1921
Kzo9I GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
LguI GCTCTTC 2 cut(s) 1007, 1183
LmnI GCTCC 6 cut(s) 941, 997, 1203, 1255, 1399, 1705
LweI GCATC 3 cut(s) 781, 1506, 1710
MaeI CTAG 5 cut(s) 264, 339, 717, 1680, 1928
MaeII ACGT 3 cut(s) 98, 108, 1462
MaeIII GTNAC 5 cut(s) 91, 224, 1541, 1780, 1833
MalI GATC 9 cut(s) 117, 317, 336, 399, 728, 738, 1641, 1806, 1923
MboI GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
MboII GAAGA 8 cut(s) 417, 661, 686, 877, 994, 1109, 1193, 1200
MfeI CAATTG 1 cut(s) 1665
MflI RGATCY 1 cut(s) 115
MhlI GDGCHC 3 cut(s) 1002, 1114, 1687
MlsI TGGCCA 1 cut(s) 474
MluNI TGGCCA 1 cut(s) 474
MlyI GAGTC 2 cut(s) 458, 1841
Mox20I TGGCCA 1 cut(s) 474
MscI TGGCCA 1 cut(s) 474
MseI TTAA 4 cut(s) 375, 957, 993, 1502
Msp20I TGGCCA 1 cut(s) 474
MspA1I CMGCKG 4 cut(s) 145, 166, 1756, 1919
MspCI CTTAAG 1 cut(s) 992
MspI CCGG 3 cut(s) 211, 1071, 1703
MspR9I CCNGG 9 cut(s) 211, 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
MunI CAATTG 1 cut(s) 1665
Mva1269I GAATGC 2 cut(s) 34, 1082
MvaI CCWGG 8 cut(s) 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
MvnI CGCG 2 cut(s) 38, 1557
NciI CCSGG 1 cut(s) 211
NdeI CATATG 1 cut(s) 1612
NdeII GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
NlaIV GGNNCC 6 cut(s) 79, 1069, 1199, 1239, 1573, 1761
NmuCI GTSAC 2 cut(s) 91, 1833
NsbI TGCGCA 2 cut(s) 1170, 1476
NspI RCATGY 3 cut(s) 1600, 1630, 1792
PaeI GCATGC 2 cut(s) 1630, 1792
PaeR7I CTCGAG 1 cut(s) 1829
PagI TCATGA 1 cut(s) 729
PaqCI CACCTGC 1 cut(s) 1330
PauI GCGCGC 1 cut(s) 1555
PciSI GCTCTTC 2 cut(s) 1007, 1183
PctI GAATGC 2 cut(s) 34, 1082
PfeI GAWTC 4 cut(s) 137, 652, 662, 1732
PflFI GACNNNGTC 1 cut(s) 97
PflMI CCANNNNNTGG 1 cut(s) 1289
PleI GAGTC 2 cut(s) 458, 1840
PpsI GAGTC 2 cut(s) 458, 1840
PshBI ATTAAT 1 cut(s) 1502
PsiI TTATAA 1 cut(s) 557
Psp124BI GAGCTC 2 cut(s) 1002, 1114
Psp6I CCWGG 8 cut(s) 1200, 1273, 1282, 1342, 1372, 1384, 1450, 1579
PspFI CCCAGC 3 cut(s) 166, 1338, 1723
PspGI CCWGG 8 cut(s) 1200, 1273, 1282, 1342, 1372, 1384, 1450, 1579
PspN4I GGNNCC 6 cut(s) 79, 1069, 1199, 1239, 1573, 1761
PspPI GGNCC 8 cut(s) 78, 306, 581, 707, 859, 1280, 1469, 1571
PspXI VCTCGAGB 1 cut(s) 1829
PsrI GAACNNNNNNTAC 2 cut(s) 140, 172
PstNI CAGNNNCTG 1 cut(s) 1472
PsuI RGATCY 1 cut(s) 115
PsyI GACNNNGTC 1 cut(s) 97
PteI GCGCGC 1 cut(s) 1555
PvuII CAGCTG 4 cut(s) 145, 166, 1756, 1919
RsaI GTAC 3 cut(s) 149, 323, 1268
RsaNI GTAC 3 cut(s) 148, 322, 1267
SacI GAGCTC 2 cut(s) 1002, 1114
SapI GCTCTTC 2 cut(s) 1007, 1183
SaqAI TTAA 4 cut(s) 375, 957, 993, 1502
Sau3AI GATC 9 cut(s) 115, 315, 334, 397, 726, 736, 1639, 1804, 1921
Sau96I GGNCC 8 cut(s) 78, 306, 581, 707, 859, 1280, 1469, 1571
SchI GAGTC 2 cut(s) 458, 1841
ScrFI CCNGG 9 cut(s) 211, 1202, 1275, 1284, 1344, 1374, 1386, 1452, 1581
SduI GDGCHC 3 cut(s) 1002, 1114, 1687
SfaNI GCATC 3 cut(s) 781, 1506, 1710
Sfr274I CTCGAG 1 cut(s) 1829
SinI GGWCC 4 cut(s) 581, 707, 1280, 1571
SlaI CTCGAG 1 cut(s) 1829
SmlI CTYRAG 3 cut(s) 992, 1796, 1829
SmoI CTYRAG 3 cut(s) 992, 1796, 1829
SphI GCATGC 2 cut(s) 1630, 1792
SspI AATATT 1 cut(s) 1302
SspMI CTAG 5 cut(s) 264, 339, 717, 1680, 1928
SstI GAGCTC 2 cut(s) 1002, 1114
StyD4I CCNGG 9 cut(s) 209, 1200, 1273, 1282, 1342, 1372, 1384, 1450, 1579
TaaI ACNGT 3 cut(s) 332, 1541, 1650
TaiI ACGT 3 cut(s) 101, 111, 1465
TaqI TCGA 4 cut(s) 120, 665, 898, 1830
TatI WGTACW 1 cut(s) 321
TfiI GAWTC 4 cut(s) 137, 652, 662, 1732
Tru1I TTAA 4 cut(s) 375, 957, 993, 1502
Tru9I TTAA 4 cut(s) 375, 957, 993, 1502
TscAI CASTG 2 cut(s) 1653, 1749
TseFI GTSAC 2 cut(s) 91, 1833
Tsp45I GTSAC 2 cut(s) 91, 1833
TspDTI ATGAA 5 cut(s) 417, 528, 900, 929, 1139
TspGWI ACGGA 2 cut(s) 149, 1068
TspRI CASTG 2 cut(s) 1653, 1749
Tth111I GACNNNGTC 1 cut(s) 97
Van91I CCANNNNNTGG 1 cut(s) 1289
Vha464I CTTAAG 1 cut(s) 992
VpaK11BI GGWCC 4 cut(s) 581, 707, 1280, 1571
VspI ATTAAT 1 cut(s) 1502
XapI RAATTY 6 cut(s) 379, 629, 690, 701, 827, 961
XceI RCATGY 3 cut(s) 1600, 1630, 1792
XcmI CCANNNNNNNNNTGG 1 cut(s) 1346
XhoI CTCGAG 1 cut(s) 1829
XmiI GTMKAC 1 cut(s) 1536
XspI CTAG 5 cut(s) 264, 339, 717, 1680, 1928
ZraI GACGTC 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.