Rorug06G0200300

Cell division protein kinase. Source PGD

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
32165145 .. 32165669
525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0200300.1

Sequence Viewer

Length: 177 bp
ATGGCCTTCGTCCCAGACAGAGGGATTTCTTCATTGGCTTCACAAAGGGCCAGTTGCAGCTCTGCTGATCTCCAAAAGCCAGCTGAACTGGATGGGAAGGCATGTGCAGCTGTTGGACAGCCTGATCTGATGGCTCTCTTTAAGTCCGTGTTTAGTGAGAATGTGACACAAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

58

Amino Acids

6.02

Weight (kDa)

4.93

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0018656)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 20
AluBI AGCT 4 cut(s) 60, 83, 110, 173
AluI AGCT 4 cut(s) 60, 83, 110, 173
AoxI GGCC 2 cut(s) 3, 48
ApeKI GCWGC 2 cut(s) 57, 107
AspS9I GGNCC 1 cut(s) 48
BbvI GCAGC 2 cut(s) 69, 119
BccI CCATC 2 cut(s) 86, 124
BisI GCNGC 2 cut(s) 58, 108
BlsI GCNGC 2 cut(s) 59, 109
BmgT120I GGNCC 1 cut(s) 48
Bsc4I CCNNNNNNNGG 1 cut(s) 20
Bse1I ACTGG 2 cut(s) 51, 93
BseGI GGATG 1 cut(s) 97
BseLI CCNNNNNNNGG 1 cut(s) 20
BseNI ACTGG 2 cut(s) 51, 93
BseXI GCAGC 2 cut(s) 69, 119
BsgI GTGCAG 1 cut(s) 126
BshFI GGCC 2 cut(s) 5, 50
BslI CCNNNNNNNGG 1 cut(s) 20
BsnI GGCC 2 cut(s) 5, 50
Bsp143I GATC 2 cut(s) 67, 124
BspANI GGCC 2 cut(s) 5, 50
BsrI ACTGG 2 cut(s) 51, 93
BssMI GATC 2 cut(s) 67, 124
BstC8I GCNNGC 1 cut(s) 81
BstDEI CTNAG 1 cut(s) 174
BstF5I GGATG 1 cut(s) 97
BstKTI GATC 2 cut(s) 70, 127
BstMBI GATC 2 cut(s) 67, 124
BstMWI GCNNNNNNNGC 1 cut(s) 107
BstNSI RCATGY 1 cut(s) 105
BstV1I GCAGC 2 cut(s) 69, 119
BsuRI GGCC 2 cut(s) 5, 50
BtsCI GGATG 1 cut(s) 97
Cac8I GCNNGC 1 cut(s) 81
Cfr13I GGNCC 1 cut(s) 48
CviAII CATG 1 cut(s) 102
DdeI CTNAG 1 cut(s) 174
DpnI GATC 2 cut(s) 69, 126
DpnII GATC 2 cut(s) 67, 124
FaeI CATG 1 cut(s) 105
FaiI YATR 1 cut(s) 103
FatI CATG 1 cut(s) 101
Fnu4HI GCNGC 2 cut(s) 58, 108
FokI GGATG 1 cut(s) 104
Fsp4HI GCNGC 2 cut(s) 58, 108
GluI GCNGC 2 cut(s) 58, 108
HaeIII GGCC 2 cut(s) 5, 50
Hin1II CATG 1 cut(s) 105
HindIII AAGCTT 1 cut(s) 171
Hpy188I TCNGA 1 cut(s) 129
HpyAV CCTTC 2 cut(s) 16, 91
HpyCH4V TGCA 2 cut(s) 57, 107
HpyF10VI GCNNNNNNNGC 1 cut(s) 107
HpyF3I CTNAG 1 cut(s) 174
Hsp92II CATG 1 cut(s) 105
Kzo9I GATC 2 cut(s) 67, 124
LpnPI CCDG 5 cut(s) 27, 64, 74, 93, 135
Lsp1109I GCAGC 2 cut(s) 69, 119
MaeIII GTNAC 1 cut(s) 163
MalI GATC 2 cut(s) 69, 126
MboI GATC 2 cut(s) 67, 124
MboII GAAGA 1 cut(s) 21
MmeI TCCRAC 1 cut(s) 94
MnlI CCTC 1 cut(s) 14
MseI TTAA 1 cut(s) 141
MspA1I CMGCKG 2 cut(s) 83, 110
MwoI GCNNNNNNNGC 1 cut(s) 107
NdeII GATC 2 cut(s) 67, 124
NlaIII CATG 1 cut(s) 105
NmuCI GTSAC 1 cut(s) 163
NspI RCATGY 1 cut(s) 105
PkrI GCNGC 2 cut(s) 59, 109
PspPI GGNCC 1 cut(s) 48
PvuII CAGCTG 2 cut(s) 83, 110
SaqAI TTAA 1 cut(s) 141
SatI GCNGC 2 cut(s) 58, 108
Sau3AI GATC 2 cut(s) 67, 124
Sau96I GGNCC 1 cut(s) 48
SetI ASST 4 cut(s) 62, 85, 112, 175
SgeI CNNG 7 cut(s) 26, 63, 92, 101, 114, 134, 160
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
TseFI GTSAC 1 cut(s) 163
TseI GCWGC 2 cut(s) 57, 107
Tsp45I GTSAC 1 cut(s) 163
TspDTI ATGAA 1 cut(s) 21
TspGWI ACGGA 1 cut(s) 136
XceI RCATGY 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.