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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000012355 RLG00000012357 |
| rosa_roxburghii | Rroxscaffold_7G00179800 |
| rosa_rugosa | Rorug06G0200200 Rorug06G0200200 Rorug06G0200300 |
| rosa_samantha | Rh6AG310300 Rh6BG313600 Rh6BG316200 Rh6BG316500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 17, 83 |
| AciI | CCGC | 1 cut(s) | 15 |
| AfaI | GTAC | 1 cut(s) | 218 |
| AjiI | CACGTC | 1 cut(s) | 40 |
| AluBI | AGCT | 2 cut(s) | 30, 88 |
| AluI | AGCT | 2 cut(s) | 30, 88 |
| ApeKI | GCWGC | 1 cut(s) | 246 |
| AspLEI | GCGC | 1 cut(s) | 83 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| BbvI | GCAGC | 1 cut(s) | 258 |
| BccI | CCATC | 2 cut(s) | 19, 110 |
| BfaI | CTAG | 1 cut(s) | 131 |
| BisI | GCNGC | 1 cut(s) | 247 |
| BlsI | GCNGC | 1 cut(s) | 248 |
| BmgBI | CACGTC | 1 cut(s) | 40 |
| BpmI | CTGGAG | 1 cut(s) | 167 |
| BpuEI | CTTGAG | 1 cut(s) | 182 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaAI | YACGTR | 1 cut(s) | 216 |
| Bse1I | ACTGG | 2 cut(s) | 22, 184 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseGI | GGATG | 1 cut(s) | 11 |
| BseNI | ACTGG | 2 cut(s) | 22, 184 |
| BseXI | GCAGC | 1 cut(s) | 258 |
| Bsh1236I | CGCG | 2 cut(s) | 17, 83 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| Bsp143I | GATC | 1 cut(s) | 48 |
| BspACI | CCGC | 1 cut(s) | 15 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspFNI | CGCG | 2 cut(s) | 17, 83 |
| BspHI | TCATGA | 1 cut(s) | 34 |
| BsrI | ACTGG | 2 cut(s) | 22, 184 |
| BssMI | GATC | 1 cut(s) | 48 |
| BstBAI | YACGTR | 1 cut(s) | 216 |
| BstF5I | GGATG | 1 cut(s) | 11 |
| BstFNI | CGCG | 2 cut(s) | 17, 83 |
| BstHHI | GCGC | 1 cut(s) | 83 |
| BstKTI | GATC | 1 cut(s) | 51 |
| BstMBI | GATC | 1 cut(s) | 48 |
| BstSNI | TACGTA | 1 cut(s) | 216 |
| BstUI | CGCG | 2 cut(s) | 17, 83 |
| BstV1I | GCAGC | 1 cut(s) | 258 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtrI | CACGTC | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 11 |
| CciI | TCATGA | 1 cut(s) | 34 |
| CfoI | GCGC | 1 cut(s) | 83 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CviAII | CATG | 2 cut(s) | 35, 220 |
| CviJI | RGCY | 5 cut(s) | 30, 88, 130, 212, 226 |
| CviKI_1 | RGCY | 5 cut(s) | 30, 88, 130, 212, 226 |
| CviQI | GTAC | 1 cut(s) | 217 |
| DpnI | GATC | 1 cut(s) | 50 |
| DpnII | GATC | 1 cut(s) | 48 |
| Eco105I | TACGTA | 1 cut(s) | 216 |
| FaeI | CATG | 2 cut(s) | 38, 223 |
| FaiI | YATR | 4 cut(s) | 36, 78, 221, 262 |
| FatI | CATG | 2 cut(s) | 34, 219 |
| Fnu4HI | GCNGC | 1 cut(s) | 247 |
| Fsp4HI | GCNGC | 1 cut(s) | 247 |
| FspBI | CTAG | 1 cut(s) | 131 |
| GlaI | GCGC | 1 cut(s) | 82 |
| GluI | GCNGC | 1 cut(s) | 247 |
| GsuI | CTGGAG | 1 cut(s) | 167 |
| HhaI | GCGC | 1 cut(s) | 83 |
| Hin1II | CATG | 2 cut(s) | 38, 223 |
| Hin6I | GCGC | 1 cut(s) | 81 |
| HinP1I | GCGC | 1 cut(s) | 81 |
| HphI | GGTGA | 1 cut(s) | 133 |
| Hpy166II | GTNNAC | 1 cut(s) | 62 |
| Hpy188I | TCNGA | 3 cut(s) | 107, 162, 190 |
| Hpy188III | TCNNGA | 1 cut(s) | 35 |
| Hpy8I | GTNNAC | 1 cut(s) | 62 |
| Hpy99I | CGWCG | 1 cut(s) | 211 |
| HpyAV | CCTTC | 2 cut(s) | 112, 148 |
| HpyCH4IV | ACGT | 2 cut(s) | 39, 215 |
| HpySE526I | ACGT | 2 cut(s) | 39, 215 |
| Hsp92II | CATG | 2 cut(s) | 38, 223 |
| HspAI | GCGC | 1 cut(s) | 81 |
| Kzo9I | GATC | 1 cut(s) | 48 |
| LpnPI | CCDG | 3 cut(s) | 35, 129, 197 |
| Lsp1109I | GCAGC | 1 cut(s) | 258 |
| MaeI | CTAG | 1 cut(s) | 131 |
| MaeII | ACGT | 2 cut(s) | 39, 215 |
| MalI | GATC | 1 cut(s) | 50 |
| MboI | GATC | 1 cut(s) | 48 |
| MluCI | AATT | 1 cut(s) | 238 |
| MmeI | TCCRAC | 1 cut(s) | 140 |
| MnlI | CCTC | 4 cut(s) | 120, 127, 214, 216 |
| MvnI | CGCG | 2 cut(s) | 17, 83 |
| NdeII | GATC | 1 cut(s) | 48 |
| NlaIII | CATG | 2 cut(s) | 38, 223 |
| PagI | TCATGA | 1 cut(s) | 34 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 212 |
| PkrI | GCNGC | 1 cut(s) | 248 |
| Ppu21I | YACGTR | 1 cut(s) | 216 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| SatI | GCNGC | 1 cut(s) | 247 |
| Sau3AI | GATC | 1 cut(s) | 48 |
| SetI | ASST | 6 cut(s) | 32, 42, 90, 123, 138, 218 |
| SmlI | CTYRAG | 1 cut(s) | 197 |
| SmoI | CTYRAG | 1 cut(s) | 197 |
| SnaBI | TACGTA | 1 cut(s) | 216 |
| Sse9I | AATT | 1 cut(s) | 238 |
| SsiI | CCGC | 1 cut(s) | 15 |
| SspMI | CTAG | 1 cut(s) | 131 |
| TaiI | ACGT | 2 cut(s) | 42, 218 |
| TaqI | TCGA | 2 cut(s) | 26, 51 |
| TasI | AATT | 1 cut(s) | 238 |
| TseI | GCWGC | 1 cut(s) | 246 |
| TspDTI | ATGAA | 2 cut(s) | 23, 69 |
| XspI | CTAG | 1 cut(s) | 131 |