Plastocyanin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g23990 |
| rosa_chinensis | RchiOBHm_Chr6g0291711 |
| rosa_laevigata | RLG00000012096 |
| rosa_roxburghii | Rroxscaffold_7G00175830 |
| rosa_rugosa | Rorug06G0221000 |
| rosa_samantha | Rh6AG333600 Rh6BG340600 Rh6CG346800 Rh6DG334000 |
| rosa_wichuraiana | Rw6G029050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 195 |
| AcoI | YGGCCR | 1 cut(s) | 87 |
| AfaI | GTAC | 2 cut(s) | 80, 199 |
| AgsI | TTSAA | 1 cut(s) | 150 |
| AluBI | AGCT | 4 cut(s) | 25, 98, 177, 207 |
| AluI | AGCT | 4 cut(s) | 25, 98, 177, 207 |
| AlwI | GGATC | 1 cut(s) | 195 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 101 |
| AoxI | GGCC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 3 cut(s) | 95, 98, 101 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 25, 57 |
| AsuC2I | CCSGG | 1 cut(s) | 142 |
| BalI | TGGCCA | 1 cut(s) | 89 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 62, 94 |
| BbvI | GCAGC | 3 cut(s) | 85, 88, 107 |
| BcnI | CCSGG | 1 cut(s) | 142 |
| BisI | GCNGC | 3 cut(s) | 96, 99, 102 |
| BlpI | GCTNAGC | 1 cut(s) | 21 |
| BlsI | GCNGC | 3 cut(s) | 97, 100, 103 |
| Bme1390I | CCNGG | 1 cut(s) | 142 |
| BmrFI | CCNGG | 1 cut(s) | 142 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 1 cut(s) | 157 |
| BpuMI | CCSGG | 1 cut(s) | 142 |
| BsaJI | CCNNGG | 1 cut(s) | 10 |
| BseDI | CCNNGG | 1 cut(s) | 10 |
| BseMII | CTCAG | 1 cut(s) | 42 |
| BseXI | GCAGC | 3 cut(s) | 85, 88, 107 |
| BshFI | GGCC | 1 cut(s) | 89 |
| BsiSI | CCGG | 1 cut(s) | 141 |
| BslFI | GGGAC | 1 cut(s) | 140 |
| BsmFI | GGGAC | 1 cut(s) | 140 |
| BsnI | GGCC | 1 cut(s) | 89 |
| Bsp143I | GATC | 2 cut(s) | 168, 187 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 21 |
| Bsp19I | CCATGG | 1 cut(s) | 10 |
| BspANI | GGCC | 1 cut(s) | 89 |
| BspCNI | CTCAG | 1 cut(s) | 43 |
| BspPI | GGATC | 1 cut(s) | 195 |
| BssECI | CCNNGG | 1 cut(s) | 10 |
| BssMI | GATC | 2 cut(s) | 168, 187 |
| BssT1I | CCWWGG | 1 cut(s) | 10 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 1 cut(s) | 111 |
| BstDEI | CTNAG | 3 cut(s) | 21, 51, 201 |
| BstDSI | CCRYGG | 1 cut(s) | 10 |
| BstKTI | GATC | 2 cut(s) | 171, 190 |
| BstMBI | GATC | 2 cut(s) | 168, 187 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 61, 95, 101, 110 |
| BstSCI | CCNGG | 1 cut(s) | 140 |
| BstV1I | GCAGC | 3 cut(s) | 85, 88, 107 |
| BsuRI | GGCC | 1 cut(s) | 89 |
| BtgI | CCRYGG | 1 cut(s) | 10 |
| Cac8I | GCNNGC | 1 cut(s) | 111 |
| CaiI | CAGNNNCTG | 1 cut(s) | 101 |
| Csp6I | GTAC | 2 cut(s) | 79, 198 |
| CviAII | CATG | 1 cut(s) | 11 |
| CviJI | RGCY | 7 cut(s) | 25, 55, 89, 98, 154, 177, 207 |
| CviKI_1 | RGCY | 7 cut(s) | 25, 55, 89, 98, 154, 177, 207 |
| CviQI | GTAC | 2 cut(s) | 79, 198 |
| DdeI | CTNAG | 3 cut(s) | 21, 51, 201 |
| DpnI | GATC | 2 cut(s) | 170, 189 |
| DpnII | GATC | 2 cut(s) | 168, 187 |
| EaeI | YGGCCR | 1 cut(s) | 87 |
| Eco130I | CCWWGG | 1 cut(s) | 10 |
| EcoT14I | CCWWGG | 1 cut(s) | 10 |
| ErhI | CCWWGG | 1 cut(s) | 10 |
| FaeI | CATG | 1 cut(s) | 14 |
| FaiI | YATR | 3 cut(s) | 12, 196, 229 |
| FaqI | GGGAC | 1 cut(s) | 140 |
| FatI | CATG | 1 cut(s) | 10 |
| Fnu4HI | GCNGC | 3 cut(s) | 96, 99, 102 |
| Fsp4HI | GCNGC | 3 cut(s) | 96, 99, 102 |
| GluI | GCNGC | 3 cut(s) | 96, 99, 102 |
| HaeIII | GGCC | 1 cut(s) | 89 |
| HapII | CCGG | 1 cut(s) | 141 |
| Hin1II | CATG | 1 cut(s) | 14 |
| HindIII | AAGCTT | 1 cut(s) | 175 |
| HinfI | GANTC | 1 cut(s) | 47 |
| HpaII | CCGG | 1 cut(s) | 141 |
| Hpy188I | TCNGA | 2 cut(s) | 52, 168 |
| Hpy188III | TCNNGA | 1 cut(s) | 67 |
| HpyAV | CCTTC | 2 cut(s) | 64, 178 |
| HpyCH4V | TGCA | 2 cut(s) | 109, 227 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 61, 95, 101, 110 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 51, 201 |
| Hsp92II | CATG | 1 cut(s) | 14 |
| Kzo9I | GATC | 2 cut(s) | 168, 187 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 4 cut(s) | 16, 103, 154, 168 |
| Lsp1109I | GCAGC | 3 cut(s) | 85, 88, 107 |
| MalI | GATC | 2 cut(s) | 170, 189 |
| MboI | GATC | 2 cut(s) | 168, 187 |
| MlsI | TGGCCA | 1 cut(s) | 89 |
| MluNI | TGGCCA | 1 cut(s) | 89 |
| MlyI | GAGTC | 1 cut(s) | 41 |
| MnlI | CCTC | 1 cut(s) | 151 |
| Mox20I | TGGCCA | 1 cut(s) | 89 |
| MscI | TGGCCA | 1 cut(s) | 89 |
| Msp20I | TGGCCA | 1 cut(s) | 89 |
| MspA1I | CMGCKG | 1 cut(s) | 98 |
| MspI | CCGG | 1 cut(s) | 141 |
| MspR9I | CCNGG | 1 cut(s) | 142 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 61, 95, 101, 110 |
| NciI | CCSGG | 1 cut(s) | 142 |
| NcoI | CCATGG | 1 cut(s) | 10 |
| NdeII | GATC | 2 cut(s) | 168, 187 |
| NlaIII | CATG | 1 cut(s) | 14 |
| PkrI | GCNGC | 3 cut(s) | 97, 100, 103 |
| PleI | GAGTC | 1 cut(s) | 41 |
| PpsI | GAGTC | 1 cut(s) | 41 |
| PstNI | CAGNNNCTG | 1 cut(s) | 101 |
| PvuII | CAGCTG | 1 cut(s) | 98 |
| RsaI | GTAC | 2 cut(s) | 80, 199 |
| RsaNI | GTAC | 2 cut(s) | 79, 198 |
| SatI | GCNGC | 3 cut(s) | 96, 99, 102 |
| Sau3AI | GATC | 2 cut(s) | 168, 187 |
| SchI | GAGTC | 1 cut(s) | 41 |
| ScrFI | CCNGG | 1 cut(s) | 142 |
| SetI | ASST | 4 cut(s) | 27, 100, 179, 209 |
| SmlI | CTYRAG | 1 cut(s) | 172 |
| SmoI | CTYRAG | 1 cut(s) | 172 |
| StyD4I | CCNGG | 1 cut(s) | 140 |
| StyI | CCWWGG | 1 cut(s) | 10 |
| TatI | WGTACW | 1 cut(s) | 197 |
| TseI | GCWGC | 3 cut(s) | 95, 98, 101 |
| TspDTI | ATGAA | 2 cut(s) | 147, 197 |