Rorug06G0252600

Histone chaperone domain CHZ

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0007419
Physical Location & Seq
Forward (+)
39891948 .. 39894101
2154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0252600.1

Sequence Viewer

Length: 1776 bp
ATGCAAGTCGGAAGGCGATCGGCGATGGAGCACAACAATACCAAAGCAAGCAAGCCTTTGAAAATGAAAGTGAAGTTCGTCGACGATGAAAAGGACGTCGTGAAGGCATCAGACGCCTTGCCTCTGCCTCTGTACCTGACCAATGCCCTGTTCTTCACTCTATTCTTCTCCGTCGTCTACTTCTTGCTCACAAGCTGGCGTGAGAAGATCCGCACCAACACTCCTCTCCACATCATCAATCTCTCTGAGATCGTGGCTATTCTAGCCTTCCTAGCCTCCTTCATCTACCTCCTCGGGTTCTTTGGTATCGATTTCGTCCAATCCCTCATTCTCCAGCCCAGCAATGACATCTGGGCCGACGATGATGACGAGGAGATTATTCTCAAGGAGGATGCTAGCAAAGTTCCTTGTGGCCAGGCCCTCAATTGCTCAATTCCCAAAATGGCTCCTATTGCTTCACCTAAAGCTGCCCCAAAGGTGTTTGAGGAGAAGGCAATGATCGAGACCCCGCCAACAACTGAAGAAGACGAAGAGATCATCAAGGCAGTGGTTGCTGGAACCATTCCTTCATACTCACTCGAGACAAAGCTTGGCGATTGCAAGAGGGCAGCTTCTATTAGGCGTGAGGCTTTACAAAGAGTTACTGGCAAGTCTCTAGAGGGTTTGCCATTGGAGGGGTTCGATTACGAGTCCATTTTGGGTCAATGCTGTGAAATGCCAGTTGGATATATTACCATTCCTGTTGGGATTGCTGGGCCTCTTATGCTCGATGGAAAAGAGTTCTCAGTTCCCATGGCCACAACTGAAGGTTGCTTGGTGGCTAGTACCAACCGTGGTTGCAAAGCTATCAACTTGTCTGGTGGAGCTTCCAGTGTTCTTTTGAAAGATGGAATGACCAGAGCTCCTGTTGTCAGATTCAACTCTGCCAAAAGAGCCGCTGAATTGAAGTTTTTCATGGAAGACCCCGACAACTACGAAACCATCTCTATGGTCTTCAACAAATCTAGCAGATTTGGTAGACTTCAATCAGTTAAGTGTGCCGTTGCTGGGAAGAACCTGTACATGAGGTTCTGCTGCAGCACTGGTGATGCTATGGGGATGAATATGGTCTCTAAAGGCGTTCAAAACGTTCTTGATTTCCTCCAGAATGACTTCCCTGACATGGATGTCATTGGCATTTCTGGTAACTACTGCTCAGACAAGAAACCTGCTGCCGTGAACTGGATCGAAGGTCGGGGTAAATCTGTGGTTTGCGAGGCTGTTATCAAGGGAGACATAGTGTCGAAGGTGTTGAAAACCAACGTCGCAGCCTTGGTGGAGCTTAACATGCTCAAGAACCTTACTGGATCCGCTATCGCTGGTGCTCTTGGTGGTTTCAATGCACATGCCAGTAACATTGTTTCAGCTGTCTACCTCGCCACTGGTCAAGACCCGGCTCAAAATATTGAGAGTTCTCACTGTATCACCATGATGGAAGCCATCAATGATGGCAAGGATCTTCACGTCTCTGTCACCATGCCGTCCATTGAGGTCGGTACAGTAGGAGGAGGGACTCAACTTGCATCTCAATCAGCTTGTCTGAACCTGCTTGGTGTGAAGGGTGCTAACAGAGAGGCACCGGGAACAAACGCAAGACAGTTGGCCAGCGTTGTAGCTGGTTCTGTTCTTGCCGGAGAGCTATCTCTCATGTCTGCAATTGCTGCTGGACAACTCGTTAAGAGCCACATGAAGTACAATAGATCTAACAAAGATGTCACAACGGTTGCTTCCGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CHZ

Protein Analysis

591

Amino Acids

63.32

Weight (kDa)

6.01

Isoelectric Point (pI)

35.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HMG-CoA_red PF00368 204 - 580 9.7e-146 Hydroxymethylglutaryl-coenzyme A reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1166
AatII GACGTC 1 cut(s) 99
Acc36I ACCTGC 2 cut(s) 1216, 1593
AccB1I GGYRCC 1 cut(s) 1615
AccI GTMKAC 4 cut(s) 81, 177, 1018, 1410
AciI CCGC 5 cut(s) 211, 509, 936, 1350, 1770
AclI AACGTT 1 cut(s) 1128
AclWI GGATC 5 cut(s) 202, 1232, 1341, 1354, 1503
AcoI YGGCCR 3 cut(s) 412, 795, 1641
AcuI CTGAAG 2 cut(s) 540, 825
AcyI GRCGYC 2 cut(s) 96, 114
AfaI GTAC 5 cut(s) 134, 826, 1061, 1537, 1733
AfiI CCNNNNNNNGG 4 cut(s) 674, 1047, 1162, 1221
AgsI TTSAA 9 cut(s) 61, 883, 919, 946, 997, 1025, 1124, 1294, 1378
AhdI GACNNNNNGTC 1 cut(s) 1279
AjiI CACGTC 1 cut(s) 1504
AjnI CCWGG 1 cut(s) 414
AjuI GAANNNNNNNTTGG 6 cut(s) 134, 166, 312, 344, 705, 737
Alw21I GWGCWC 3 cut(s) 33, 904, 1366
Alw26I GTCTC 6 cut(s) 497, 575, 657, 1114, 1266, 1510
AlwI GGATC 5 cut(s) 202, 1232, 1341, 1354, 1503
Ama87I CYCGRG 2 cut(s) 293, 578
AoxI GGCC 6 cut(s) 354, 412, 417, 755, 795, 1641
ApeKI GCWGC 7 cut(s) 467, 608, 1074, 1077, 1211, 1307, 1700
Asp700I GAANNNNTTC 2 cut(s) 950, 1151
AspS9I GGNCC 3 cut(s) 354, 418, 755
AsuC2I CCSGG 2 cut(s) 1433, 1620
AsuHPI GGTGA 4 cut(s) 450, 1097, 1456, 1504
AsuNHI GCTAGC 1 cut(s) 395
AvaI CYCGRG 2 cut(s) 293, 578
BalI TGGCCA 3 cut(s) 414, 797, 1643
BamHI GGATCC 1 cut(s) 1346
BanI GGYRCC 1 cut(s) 1615
BanII GRGCYC 1 cut(s) 904
BarI GAAGNNNNNNTAC 2 cut(s) 1043, 1075
BbsI GAAGAC 3 cut(s) 531, 966, 985
Bbv12I GWGCWC 3 cut(s) 33, 904, 1366
BbvI GCAGC 7 cut(s) 454, 620, 1061, 1089, 1198, 1319, 1687
BccI CCATC 7 cut(s) 19, 764, 881, 989, 1465, 1481, 1487
BceAI ACGGC 3 cut(s) 1025, 1199, 1504
BciT130I CCWGG 1 cut(s) 416
BcnI CCSGG 2 cut(s) 1433, 1620
BcoDI GTCTC 6 cut(s) 497, 575, 657, 1114, 1266, 1510
BfaI CTAG 6 cut(s) 263, 272, 396, 656, 822, 1005
BfmI CTRYAG 1 cut(s) 1075
BfuAI ACCTGC 2 cut(s) 1216, 1593
BglII AGATCT 1 cut(s) 1739
BisI GCNGC 8 cut(s) 468, 609, 936, 1075, 1078, 1212, 1308, 1701
BlsI GCNGC 8 cut(s) 469, 610, 937, 1076, 1079, 1213, 1309, 1702
Bme1390I CCNGG 3 cut(s) 416, 1433, 1620
BmeRI GACNNNNNGTC 1 cut(s) 1279
BmeT110I CYCGRG 2 cut(s) 293, 578
BmgBI CACGTC 1 cut(s) 1504
BmgT120I GGNCC 3 cut(s) 354, 418, 755
BmiI GGNNCC 4 cut(s) 447, 559, 1348, 1617
BmrFI CCNGG 3 cut(s) 416, 1433, 1620
BmsI GCATC 4 cut(s) 116, 382, 1078, 1571
BmtI GCTAGC 1 cut(s) 399
BpiI GAAGAC 3 cut(s) 531, 966, 985
BpmI CTGGAG 2 cut(s) 317, 1127
BpuEI CTTGAG 2 cut(s) 368, 1316
BpuMI CCSGG 2 cut(s) 1433, 1620
Bsa29I ATCGAT 1 cut(s) 309
BsaHI GRCGYC 2 cut(s) 96, 114
BsaI GGTCTC 2 cut(s) 497, 1114
BsaJI CCNNGG 4 cut(s) 292, 792, 832, 1311
BsaXI ACNNNNNCTCC 6 cut(s) 205, 235, 886, 916, 1263, 1293
Bsc4I CCNNNNNNNGG 4 cut(s) 674, 1047, 1162, 1221
Bse1I ACTGG 8 cut(s) 649, 719, 870, 1087, 1226, 1348, 1389, 1426
Bse3DI GCAATG 2 cut(s) 349, 501
BseBI CCWGG 1 cut(s) 416
BseCI ATCGAT 1 cut(s) 309
BseDI CCNNGG 4 cut(s) 292, 792, 832, 1311
BseGI GGATG 3 cut(s) 397, 1104, 1171
BseLI CCNNNNNNNGG 4 cut(s) 674, 1047, 1162, 1221
BseMI GCAATG 2 cut(s) 349, 501
BseMII CTCAG 3 cut(s) 237, 798, 1209
BseNI ACTGG 8 cut(s) 649, 719, 870, 1087, 1226, 1348, 1389, 1426
BseRI GAGGAG 5 cut(s) 213, 281, 386, 500, 1560
BseXI GCAGC 7 cut(s) 454, 620, 1061, 1089, 1198, 1319, 1687
BseYI CCCAGC 3 cut(s) 338, 752, 1046
Bsh1285I CGRYCG 1 cut(s) 20
BshFI GGCC 6 cut(s) 356, 414, 419, 757, 797, 1643
BshNI GGYRCC 1 cut(s) 1615
BshVI ATCGAT 1 cut(s) 309
BsiEI CGRYCG 1 cut(s) 20
BsiHKAI GWGCWC 3 cut(s) 33, 904, 1366
BsiHKCI CYCGRG 2 cut(s) 293, 578
BsiSI CCGG 3 cut(s) 1433, 1619, 1671
BslFI GGGAC 1 cut(s) 1564
BslI CCNNNNNNNGG 4 cut(s) 674, 1047, 1162, 1221
BsmAI GTCTC 6 cut(s) 497, 575, 657, 1114, 1266, 1510
BsmBI CGTCTC 1 cut(s) 1510
BsmFI GGGAC 1 cut(s) 1564
BsnI GGCC 6 cut(s) 356, 414, 419, 757, 797, 1643
Bso31I GGTCTC 2 cut(s) 497, 1114
BsoBI CYCGRG 2 cut(s) 293, 578
Bsp1286I GDGCHC 3 cut(s) 33, 904, 1366
Bsp1407I TGTACA 1 cut(s) 1059
Bsp143I GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
Bsp19I CCATGG 1 cut(s) 792
BspACI CCGC 5 cut(s) 211, 509, 936, 1350, 1770
BspANI GGCC 6 cut(s) 356, 414, 419, 757, 797, 1643
BspCNI CTCAG 3 cut(s) 238, 797, 1208
BspDI ATCGAT 1 cut(s) 309
BspLI GGNNCC 4 cut(s) 447, 559, 1348, 1617
BspMAI CTGCAG 1 cut(s) 1079
BspMI ACCTGC 2 cut(s) 1216, 1593
BspOI GCTAGC 1 cut(s) 399
BspPI GGATC 5 cut(s) 202, 1232, 1341, 1354, 1503
BspT107I GGYRCC 1 cut(s) 1615
BspTNI GGTCTC 2 cut(s) 497, 1114
BsrDI GCAATG 2 cut(s) 349, 501
BsrGI TGTACA 1 cut(s) 1059
BsrI ACTGG 8 cut(s) 649, 719, 870, 1087, 1226, 1348, 1389, 1426
BssECI CCNNGG 4 cut(s) 292, 792, 832, 1311
BssMI GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
BssNI GRCGYC 2 cut(s) 96, 114
BssT1I CCWWGG 2 cut(s) 792, 1311
Bst2UI CCWGG 1 cut(s) 416
Bst4CI ACNGT 5 cut(s) 833, 1460, 1540, 1638, 1762
Bst6I CTCTTC 1 cut(s) 525
BstACI GRCGYC 2 cut(s) 96, 114
BstAPI GCANNNNNTGC 2 cut(s) 551, 1700
BstAUI TGTACA 1 cut(s) 1059
BstC8I GCNNGC 5 cut(s) 49, 53, 197, 397, 1645
BstDEI CTNAG 3 cut(s) 246, 784, 1195
BstDSI CCRYGG 2 cut(s) 792, 832
BstF5I GGATG 3 cut(s) 397, 1104, 1171
BstKTI GATC 9 cut(s) 20, 210, 252, 501, 537, 1227, 1349, 1498, 1742
BstMAI GTCTC 6 cut(s) 497, 575, 657, 1114, 1266, 1510
BstMBI GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
BstMCI CGRYCG 1 cut(s) 20
BstMWI GCNNNNNNNGC 9 cut(s) 113, 263, 272, 452, 551, 763, 932, 1327, 1700
BstNI CCWGG 1 cut(s) 416
BstNSI RCATGY 2 cut(s) 1330, 1388
BstSCI CCNGG 3 cut(s) 414, 1431, 1618
BstSFI CTRYAG 1 cut(s) 1075
BstV1I GCAGC 7 cut(s) 454, 620, 1061, 1089, 1198, 1319, 1687
BstV2I GAAGAC 3 cut(s) 531, 966, 985
BstX2I RGATCY 4 cut(s) 207, 1346, 1495, 1739
BstXI CCANNNNNNTGG 1 cut(s) 988
BstYI RGATCY 4 cut(s) 207, 1346, 1495, 1739
Bsu15I ATCGAT 1 cut(s) 309
BsuRI GGCC 6 cut(s) 356, 414, 419, 757, 797, 1643
BsuTUI ATCGAT 1 cut(s) 309
BtgI CCRYGG 2 cut(s) 792, 832
BtgZI GCGATG 1 cut(s) 38
BtrI CACGTC 1 cut(s) 1504
BtsCI GGATG 3 cut(s) 397, 1104, 1171
BtsI GCAGTG 1 cut(s) 552
BtsIMutI CAGTG 5 cut(s) 552, 877, 1080, 1419, 1456
BveI ACCTGC 2 cut(s) 1216, 1593
Cac8I GCNNGC 5 cut(s) 49, 53, 197, 397, 1645
Cfr13I GGNCC 3 cut(s) 354, 418, 755
ClaI ATCGAT 1 cut(s) 309
CseI GACGC 1 cut(s) 122
Csp6I GTAC 5 cut(s) 133, 825, 1060, 1536, 1732
CviQI GTAC 5 cut(s) 133, 825, 1060, 1536, 1732
DdeI CTNAG 3 cut(s) 246, 784, 1195
DpnI GATC 9 cut(s) 19, 209, 251, 500, 536, 1226, 1348, 1497, 1741
DpnII GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
DrdI GACNNNNNNGTC 1 cut(s) 1166
DriI GACNNNNNGTC 1 cut(s) 1279
DseDI GACNNNNNNGTC 1 cut(s) 1166
EaeI YGGCCR 3 cut(s) 412, 795, 1641
Eam1104I CTCTTC 1 cut(s) 525
Eam1105I GACNNNNNGTC 1 cut(s) 1279
EarI CTCTTC 1 cut(s) 525
Ecl136II GAGCTC 1 cut(s) 902
Eco130I CCWWGG 2 cut(s) 792, 1311
Eco24I GRGCYC 1 cut(s) 904
Eco31I GGTCTC 2 cut(s) 497, 1114
Eco53kI GAGCTC 1 cut(s) 902
Eco57I CTGAAG 2 cut(s) 540, 825
Eco88I CYCGRG 2 cut(s) 293, 578
EcoICRI GAGCTC 1 cut(s) 902
EcoO109I RGGNCCY 1 cut(s) 418
EcoRII CCWGG 1 cut(s) 414
EcoT14I CCWWGG 2 cut(s) 792, 1311
EcoT38I GRGCYC 1 cut(s) 904
ErhI CCWWGG 2 cut(s) 792, 1311
Esp3I CGTCTC 1 cut(s) 1510
FalI AAGNNNNNCTT 2 cut(s) 40, 72
FaqI GGGAC 1 cut(s) 1564
FauI CCCGC 1 cut(s) 516
FblI GTMKAC 4 cut(s) 81, 177, 1018, 1410
Fnu4HI GCNGC 8 cut(s) 468, 609, 936, 1075, 1078, 1212, 1308, 1701
FokI GGATG 3 cut(s) 404, 1111, 1178
FriOI GRGCYC 1 cut(s) 904
Fsp4HI GCNGC 8 cut(s) 468, 609, 936, 1075, 1078, 1212, 1308, 1701
FspBI CTAG 6 cut(s) 263, 272, 396, 656, 822, 1005
GluI GCNGC 8 cut(s) 468, 609, 936, 1075, 1078, 1212, 1308, 1701
GsaI CCCAGC 3 cut(s) 342, 756, 1050
GsuI CTGGAG 2 cut(s) 317, 1127
HaeIII GGCC 6 cut(s) 356, 414, 419, 757, 797, 1643
HapII CCGG 3 cut(s) 1433, 1619, 1671
HgaI GACGC 1 cut(s) 122
Hin1I GRCGYC 2 cut(s) 96, 114
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 1 cut(s) 587
HinfI GANTC 3 cut(s) 689, 915, 1552
HpaII CCGG 3 cut(s) 1433, 1619, 1671
HphI GGTGA 4 cut(s) 450, 1097, 1456, 1504
Hpy166II GTNNAC 5 cut(s) 82, 178, 1019, 1219, 1411
Hpy188I TCNGA 6 cut(s) 11, 112, 247, 914, 1198, 1581
Hpy188III TCNNGA 8 cut(s) 100, 502, 580, 656, 1133, 1144, 1333, 1427
Hpy8I GTNNAC 5 cut(s) 82, 178, 1019, 1219, 1411
Hpy99I CGWCG 6 cut(s) 83, 86, 101, 176, 362, 1307
HpyCH4III ACNGT 5 cut(s) 833, 1460, 1540, 1638, 1762
HpyCH4IV ACGT 4 cut(s) 96, 1128, 1302, 1503
HpyCH4V TGCA 7 cut(s) 4, 600, 840, 1077, 1382, 1562, 1694
HpyF10VI GCNNNNNNNGC 9 cut(s) 113, 263, 272, 452, 551, 763, 932, 1327, 1700
HpyF3I CTNAG 3 cut(s) 246, 784, 1195
HpySE526I ACGT 4 cut(s) 96, 1128, 1302, 1503
Hsp92I GRCGYC 2 cut(s) 96, 114
Kzo9I GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
LmnI GCTCC 5 cut(s) 28, 451, 863, 907, 1318
Lsp1109I GCAGC 7 cut(s) 454, 620, 1061, 1089, 1198, 1319, 1687
LweI GCATC 4 cut(s) 116, 382, 1078, 1571
MaeI CTAG 6 cut(s) 263, 272, 396, 656, 822, 1005
MaeII ACGT 4 cut(s) 96, 1128, 1302, 1503
MaeIII GTNAC 5 cut(s) 640, 1184, 1391, 1510, 1753
MalI GATC 9 cut(s) 19, 209, 251, 500, 536, 1226, 1348, 1497, 1741
MboI GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
MfeI CAATTG 2 cut(s) 424, 1695
MflI RGATCY 4 cut(s) 207, 1346, 1495, 1739
MhlI GDGCHC 3 cut(s) 33, 904, 1366
MlsI TGGCCA 3 cut(s) 414, 797, 1643
MluCI AATT 4 cut(s) 424, 432, 941, 1695
MluNI TGGCCA 3 cut(s) 414, 797, 1643
MlyI GAGTC 2 cut(s) 698, 1546
MmeI TCCRAC 1 cut(s) 703
Mox20I TGGCCA 3 cut(s) 414, 797, 1643
MroXI GAANNNNTTC 2 cut(s) 950, 1151
MscI TGGCCA 3 cut(s) 414, 797, 1643
MseI TTAA 3 cut(s) 1032, 1323, 1716
MslI CAYNNNNRTG 2 cut(s) 986, 1469
Msp20I TGGCCA 3 cut(s) 414, 797, 1643
MspA1I CMGCKG 2 cut(s) 938, 1406
MspI CCGG 3 cut(s) 1433, 1619, 1671
MspR9I CCNGG 3 cut(s) 416, 1433, 1620
MunI CAATTG 2 cut(s) 424, 1695
MvaI CCWGG 1 cut(s) 416
MwoI GCNNNNNNNGC 9 cut(s) 113, 263, 272, 452, 551, 763, 932, 1327, 1700
NciI CCSGG 2 cut(s) 1433, 1620
NcoI CCATGG 1 cut(s) 792
NdeII GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
NheI GCTAGC 1 cut(s) 395
NlaIV GGNNCC 4 cut(s) 447, 559, 1348, 1617
NmuCI GTSAC 2 cut(s) 1510, 1753
NspI RCATGY 2 cut(s) 1330, 1388
PaeR7I CTCGAG 1 cut(s) 578
PcsI WCGNNNNNNNCGW 1 cut(s) 366
PdmI GAANNNNTTC 2 cut(s) 950, 1151
PfeI GAWTC 1 cut(s) 915
PkrI GCNGC 8 cut(s) 469, 610, 937, 1076, 1079, 1213, 1309, 1702
Ple19I CGATCG 1 cut(s) 20
PleI GAGTC 2 cut(s) 697, 1546
PpsI GAGTC 2 cut(s) 697, 1546
Psp124BI GAGCTC 1 cut(s) 904
Psp1406I AACGTT 1 cut(s) 1128
Psp6I CCWGG 1 cut(s) 414
PspFI CCCAGC 3 cut(s) 338, 752, 1046
PspGI CCWGG 1 cut(s) 414
PspN4I GGNNCC 4 cut(s) 447, 559, 1348, 1617
PspPI GGNCC 3 cut(s) 354, 418, 755
PsrI GAACNNNNNNTAC 2 cut(s) 1052, 1084
PstI CTGCAG 1 cut(s) 1079
PsuI RGATCY 4 cut(s) 207, 1346, 1495, 1739
PvuI CGATCG 1 cut(s) 20
PvuII CAGCTG 1 cut(s) 1406
RsaI GTAC 5 cut(s) 134, 826, 1061, 1537, 1733
RsaNI GTAC 5 cut(s) 133, 825, 1060, 1536, 1732
RseI CAYNNNNRTG 2 cut(s) 986, 1469
SacI GAGCTC 1 cut(s) 904
SalI GTCGAC 1 cut(s) 80
SaqAI TTAA 3 cut(s) 1032, 1323, 1716
SatI GCNGC 8 cut(s) 468, 609, 936, 1075, 1078, 1212, 1308, 1701
Sau3AI GATC 9 cut(s) 17, 207, 249, 498, 534, 1224, 1346, 1495, 1739
Sau96I GGNCC 3 cut(s) 354, 418, 755
SchI GAGTC 2 cut(s) 698, 1546
ScrFI CCNGG 3 cut(s) 416, 1433, 1620
SduI GDGCHC 3 cut(s) 33, 904, 1366
SfaNI GCATC 4 cut(s) 116, 382, 1078, 1571
SfcI CTRYAG 1 cut(s) 1075
Sfr274I CTCGAG 1 cut(s) 578
SgrDI CGTCGACG 1 cut(s) 80
SlaI CTCGAG 1 cut(s) 578
SmiMI CAYNNNNRTG 2 cut(s) 986, 1469
SmlI CTYRAG 3 cut(s) 383, 578, 1331
SmoI CTYRAG 3 cut(s) 383, 578, 1331
Sse9I AATT 4 cut(s) 424, 432, 941, 1695
SsiI CCGC 5 cut(s) 211, 509, 936, 1350, 1770
SspI AATATT 1 cut(s) 1444
SspMI CTAG 6 cut(s) 263, 272, 396, 656, 822, 1005
SstI GAGCTC 1 cut(s) 904
StyD4I CCNGG 3 cut(s) 414, 1431, 1618
StyI CCWWGG 2 cut(s) 792, 1311
TaaI ACNGT 5 cut(s) 833, 1460, 1540, 1638, 1762
TaiI ACGT 4 cut(s) 99, 1131, 1305, 1506
TaqI TCGA 8 cut(s) 81, 309, 501, 579, 681, 768, 1227, 1283
TasI AATT 4 cut(s) 424, 432, 941, 1695
TatI WGTACW 2 cut(s) 1059, 1731
TauI GCSGC 1 cut(s) 938
TfiI GAWTC 1 cut(s) 915
Tru1I TTAA 3 cut(s) 1032, 1323, 1716
Tru9I TTAA 3 cut(s) 1032, 1323, 1716
TscAI CASTG 5 cut(s) 552, 877, 1087, 1426, 1463
TseFI GTSAC 2 cut(s) 1510, 1753
TseI GCWGC 7 cut(s) 467, 608, 1074, 1077, 1211, 1307, 1700
Tsp45I GTSAC 2 cut(s) 1510, 1753
TspDTI ATGAA 7 cut(s) 80, 102, 271, 558, 943, 1115, 1742
TspGWI ACGGA 1 cut(s) 160
TspRI CASTG 5 cut(s) 552, 877, 1087, 1426, 1463
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 2 cut(s) 1330, 1388
XhoI CTCGAG 1 cut(s) 578
XmiI GTMKAC 4 cut(s) 81, 177, 1018, 1410
XmnI GAANNNNTTC 2 cut(s) 950, 1151
XspI CTAG 6 cut(s) 263, 272, 396, 656, 822, 1005
ZraI GACGTC 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.