Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0010867

Physical Location & Seq

Genomic Coordinates Forward (+)

41702348 .. 41706154

Gene Structure 3807 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0270100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGGTGGCGGTATAACCATTCCTCCTGATAACACAACAGGGGAAGAAGACTCCTCCCTGGACCAGGATTCTACCCAACTGTCGTCTCCAATTCTCAGAAGTGAATTGAGCATGGGGGCTGAGGAGGGTGCGGTAGATAAACAAAGTCAGAGTGGTTCGGTGTCTGGAGACTATGGCAGACTGCGTGATTTGGAAGCCAATGAGAGGATGAGGGAAAATGTTTATAGGAAAATTATGCAGACTGGTGAGTTACTGGGGATTCGAGGCAAACATTCCAAAGAGGCTAAGGACAAAATACTGAGCTACACCCCTGGGGCATGGATTGAGACTGCAGGTGCCATGAAAAAAAGGGACTATGATGTGCCAAAGACGACTACTCTATTGTTGGTTGGTCCAAAAGGATCTGGAAAGAGTAGTCTTATTAACAGAATATCAAAGGTGCTTGAAGATGACAAGTTTGCATCAGAAAGAGCACAAGTCTCATATAATTCATCTATCGGAGATGGAACCCTTTTCCTCCAGGAATGTATGATACCAAGAGGTTCAACTTCGTTTTGCATCTATGATACTCGTAGTCTGTCTGACGATTCAGCTGAAAACATAAAAATGCTGAAGCATTGGATGGAAAATGGTGTTCGTCATGGGGAGCTTGCTATTAGGGATTCAGACAGTCAAAGTTTGAGGACTGCGATGATGTGCAAAGCTCATGACAATGATCATCTTTCCAGTGCGATCAGGAAGGTTAACTTTGTCATATTTGCTGTTAATGGCCTTTCAGTTCTGAAAGCACTGGAAAGTGAGGAAGATGCAGAGACTCAATACACTCGAATGATTGATTCCATGTTCAACTGCCCATACTTGGCATTTAAAGATGATAAACCTGCTGTTGTTGTCACTCATGGTGATCTACTTTCACATGACGAACGTGCTCGTGTTCGTGTCCATTTGGGAGAACTATTGGGTATTCCACCTACAACCCAAATATTTGACATCCCAGAAAGCAGTGACCCAGTAACTGAGTCCACAACAATTGACATGTTACGCTATTCGCTTGAGCATGCTGAGAAAAATTTTACTCATAAGAAAAAGGTTCCTGCAATATCACTACTACCATTTATGCTCCTGTTAATGCTTCTTGGAACTGCCACCAATTTATGGTGTATGTATCATCATACACATATTCAGCAGGGTCCTGCAACCCTACCGGCAATTCAGCACTGTCAGTGTCCCCAAGCGCATATTCAACACTATCCTTTGCCCCAAGCTCGTATTCAGCATGACCATGGCCCTTTTACCGAAGAACATAATCAGAAAGAACCTTTGCCTGAAGAGCATATTCAGAAAGAACCTTTGCCCGAAGAATACATTCAGAAAGAACTACAAGAACCTTTGCCCCAAGAACAGGTTCAACAAGACGCTTTGCGCCAAGAGCAGGTTCAGCAAGACGCCTTGCCCCAAGAACAGGTTCAGCAGGACGCCTTGCCCCTAGAACACATTCAGCAGGACGCCTTGCCCCTAGAACAGGTTCAGCAGGACGCTTTGCCCCTAGAACAGGTTCAGCAGGACGCTTTGCCACAAGACCAGGTTCAGCAGGACGCTTTGCCACAAGACCAGGTTCAGAAAGACCCTTTTCCCCAAGACCAAGTTCAGCAAGGCCCTTTGCCCCAAGACCACGTTCAGCAAGGCCCTTTCCCACAAATGCATATTCAGCACTGCACTTCTCCAGAAGGTCATGTTCAGCACGATTGTGGCCCTTTGCCTGAAATTCTTACTCAGCACAGCCCTTCACCCTCTTTGGCCACTTCAACCCCTTCGCCCCTTGCGGCTCCTTCGGTCCCTTCCGCTCATGAGGATGGCTCTTTGCCCTCTTCTCCCCAAGCACATGTTCATCCTGACCCTTCACCCTCTAGTCCCTCATCCCCGCAAACTCCACTTCATGGTCCTTTGCCCCGAGTGCAAGCAGAACTTGAGAAAATTAAAACTAAAGTTGAGAAATTTAGGACAAAACTTGATTGGAGTAAAATCCGTCATTTGTATCTAGATGAAGATTCTAAGATACATATAGACTGGAAGAAGATTCGACACTTGTATCTAGACGAAGATTCCAAGGTGCGGATAGATTGGAAGAAAATTCGTCATTTGTATCTAGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005794 GO:0005801 GO:0005802 GO:0005886 GO:0012505 GO:0016020 GO:0016740 GO:0016757 GO:0016763 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:1990585

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

No domains found.

Protein Analysis

718

Amino Acids

80.69

Weight (kDa)

5.37

Isoelectric Point (pI)

60.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010867)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32050
fragaria_vesca	FvH4_2g28330
malus_domestica	MD15G1130500.v1.1
prunus_persica	Prupe.1G485900_v2.0.a1 Prupe.1G485900_v2.0.a1 Prupe.1G485900_v2.0.a1 Prupe.1G485900_v2.0.a1 Prupe.1G485900_v2.0.a1
pyrus_communis	pycom15g11760
rosa_chinensis	RchiOBHm_Chr6g0297241
rosa_laevigata	RLG00000011617
rosa_multiflora	Rmu_sc0013249.1_g000007
rosa_roxburghii	Rroxscaffold_7G00170730
rosa_rugosa	Rorug06G0270000 Rorug06G0270100
rosa_samantha	Rh6AG381300 Rh6BG389500 Rh6CG394700 Rh6DG381400
rosa_wichuraiana	Rw6G033210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	323
Acc36I	ACCTGC	3 cut(s)	323, 889, 1423
AccB1I	GGYRCC	1 cut(s)	335
AccB7I	CCANNNNNTGG	2 cut(s)	1155, 1937
AccBSI	CCGCTC	1 cut(s)	1844
AciI	CCGC	6 cut(s)	9, 131, 1823, 1842, 1922, 2113
AclWI	GGATC	1 cut(s)	409
AcoI	YGGCCR	1 cut(s)	1797
AcsI	RAATTY	4 cut(s)	1069, 1764, 1994, 2130
AcuI	CTGAAG	2 cut(s)	632, 1347
AcyI	GRCGYC	3 cut(s)	1446, 1476, 1506
AflIII	ACRYGT	2 cut(s)	1035, 1882
AgsI	TTSAA	6 cut(s)	446, 546, 847, 1244, 1409, 1806
AjnI	CCWGG	6 cut(s)	57, 63, 310, 519, 1581, 1611
AleI	CACNNNNGTG	1 cut(s)	1746
AluBI	AGCT	5 cut(s)	303, 593, 649, 704, 1265
AluI	AGCT	5 cut(s)	303, 593, 649, 704, 1265
Alw21I	GWGCWC	2 cut(s)	475, 931
Alw26I	GTCTC	5 cut(s)	90, 162, 320, 484, 806
AlwI	GGATC	1 cut(s)	409
AlwNI	CAGNNNCTG	1 cut(s)	1016
Ama87I	CYCGRG	1 cut(s)	1950
AoxI	GGCC	6 cut(s)	769, 1285, 1654, 1684, 1750, 1797
ApoI	RAATTY	4 cut(s)	1069, 1764, 1994, 2130
Asp700I	GAANNNNTTC	6 cut(s)	1365, 1404, 1464, 1494, 1524, 1554
AspLEI	GCGC	2 cut(s)	1237, 1425
AspS9I	GGNCC	9 cut(s)	61, 392, 1190, 1286, 1655, 1685, 1751, 1834, 1940
AsuHPI	GGTGA	4 cut(s)	257, 914, 1779, 1893
AvaI	CYCGRG	1 cut(s)	1950
AvaII	GGWCC	5 cut(s)	61, 392, 1190, 1834, 1940
BaeI	ACNNNNGTAYC	2 cut(s)	2072, 2105
BalI	TGGCCA	1 cut(s)	1799
BanI	GGYRCC	1 cut(s)	335
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	1 cut(s)	54
Bbv12I	GWGCWC	2 cut(s)	475, 931
BbvCI	CCTCAGC	1 cut(s)	120
BccI	CCATC	3 cut(s)	497, 616, 1847
BciT130I	CCWGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
BclI	TGATCA	1 cut(s)	715
BcoDI	GTCTC	5 cut(s)	90, 162, 320, 484, 806
BfaI	CTAG	7 cut(s)	1487, 1517, 1547, 1908, 2039, 2093, 2147
BfmI	CTRYAG	1 cut(s)	330
BfuAI	ACCTGC	3 cut(s)	323, 889, 1423
BisI	GCNGC	1 cut(s)	1824
BlsI	GCNGC	1 cut(s)	1825
Bme1390I	CCNGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
Bme18I	GGWCC	5 cut(s)	61, 392, 1190, 1834, 1940
BmeT110I	CYCGRG	1 cut(s)	1950
BmgT120I	GGNCC	9 cut(s)	61, 392, 1190, 1286, 1655, 1685, 1751, 1834, 1940
BmiI	GGNNCC	6 cut(s)	337, 508, 1092, 1191, 1827, 1836
BmrFI	CCNGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
BmrI	ACTGGG	2 cut(s)	263, 1004
BmsI	GCATC	3 cut(s)	470, 567, 796
BmuI	ACTGGG	2 cut(s)	263, 1004
BpiI	GAAGAC	1 cut(s)	54
BplI	GAGNNNNNCTC	2 cut(s)	1841, 1873
BpmI	CTGGAG	3 cut(s)	186, 503, 1707
Bpu10I	CCTNAGC	2 cut(s)	120, 285
BpuEI	CTTGAG	2 cut(s)	1073, 1988
BsaHI	GRCGYC	3 cut(s)	1446, 1476, 1506
BsaJI	CCNNGG	5 cut(s)	57, 310, 311, 1282, 2106
BsaXI	ACNNNNNCTCC	2 cut(s)	7, 37
Bse118I	RCCGGY	1 cut(s)	1204
Bse1I	ACTGG	6 cut(s)	247, 258, 726, 795, 1010, 2072
BseBI	CCWGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
BseDI	CCNNGG	5 cut(s)	57, 310, 311, 1282, 2106
BseGI	GGATG	6 cut(s)	213, 627, 990, 1858, 1888, 1916
BseMII	CTCAG	6 cut(s)	109, 111, 290, 1008, 1053, 1787
BseNI	ACTGG	6 cut(s)	247, 258, 726, 795, 1010, 2072
BseRI	GAGGAG	2 cut(s)	43, 137
BsgI	GTGCAG	1 cut(s)	1699
BshFI	GGCC	6 cut(s)	771, 1287, 1656, 1686, 1752, 1799
BshNI	GGYRCC	1 cut(s)	335
BsiHKAI	GWGCWC	2 cut(s)	475, 931
BsiHKCI	CYCGRG	1 cut(s)	1950
BsiSI	CCGG	1 cut(s)	1205
BslFI	GGGAC	4 cut(s)	365, 1212, 1820, 1896
BsmAI	GTCTC	5 cut(s)	90, 162, 320, 484, 806
BsmBI	CGTCTC	1 cut(s)	90
BsmFI	GGGAC	4 cut(s)	365, 1212, 1820, 1896
BsnI	GGCC	6 cut(s)	771, 1287, 1656, 1686, 1752, 1799
BsoBI	CYCGRG	1 cut(s)	1950
Bsp1286I	GDGCHC	2 cut(s)	475, 931
Bsp143I	GATC	4 cut(s)	401, 715, 732, 904
Bsp19I	CCATGG	1 cut(s)	1282
BspACI	CCGC	6 cut(s)	9, 131, 1823, 1842, 1922, 2113
BspANI	GGCC	6 cut(s)	771, 1287, 1656, 1686, 1752, 1799
BspCNI	CTCAG	6 cut(s)	108, 112, 291, 1009, 1054, 1786
BspHI	TCATGA	2 cut(s)	706, 1846
BspLI	GGNNCC	6 cut(s)	337, 508, 1092, 1191, 1827, 1836
BspMAI	CTGCAG	1 cut(s)	334
BspMI	ACCTGC	3 cut(s)	323, 889, 1423
BspPI	GGATC	1 cut(s)	409
BspQI	GCTCTTC	1 cut(s)	1323
BspT107I	GGYRCC	1 cut(s)	335
BsrBI	CCGCTC	1 cut(s)	1844
BsrFI	RCCGGY	1 cut(s)	1204
BsrI	ACTGG	6 cut(s)	247, 258, 726, 795, 1010, 2072
BssAI	RCCGGY	1 cut(s)	1204
BssECI	CCNNGG	5 cut(s)	57, 310, 311, 1282, 2106
BssMI	GATC	4 cut(s)	401, 715, 732, 904
BssNI	GRCGYC	3 cut(s)	1446, 1476, 1506
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	2 cut(s)	1282, 2106
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
Bst4CI	ACNGT	3 cut(s)	81, 671, 1220
Bst6I	CTCTTC	2 cut(s)	1323, 1873
BstACI	GRCGYC	3 cut(s)	1446, 1476, 1506
BstC8I	GCNNGC	3 cut(s)	651, 1059, 1959
BstDEI	CTNAG	8 cut(s)	95, 120, 285, 299, 1017, 1062, 1773, 2052
BstDSI	CCRYGG	1 cut(s)	1282
BstENI	CCTNNNNNAGG	3 cut(s)	62, 1520, 1550
BstF5I	GGATG	6 cut(s)	213, 627, 990, 1858, 1888, 1916
BstHHI	GCGC	2 cut(s)	1237, 1425
BstKTI	GATC	4 cut(s)	404, 718, 735, 907
BstMAI	GTCTC	5 cut(s)	90, 162, 320, 484, 806
BstMBI	GATC	4 cut(s)	401, 715, 732, 904
BstMWI	GCNNNNNNNGC	5 cut(s)	1330, 1429, 1438, 1708, 1954
BstNI	CCWGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
BstNSI	RCATGY	3 cut(s)	1039, 1061, 1886
BstSCI	CCNGG	6 cut(s)	57, 63, 310, 519, 1581, 1611
BstSFI	CTRYAG	1 cut(s)	330
BstV2I	GAAGAC	1 cut(s)	54
BstX2I	RGATCY	1 cut(s)	401
BstYI	RGATCY	1 cut(s)	401
BsuRI	GGCC	6 cut(s)	771, 1287, 1656, 1686, 1752, 1799
BtgI	CCRYGG	1 cut(s)	1282
BtgZI	GCGATG	1 cut(s)	704
BtsCI	GGATG	6 cut(s)	213, 627, 990, 1858, 1888, 1916
BtsI	GCAGTG	2 cut(s)	1009, 1711
BtsIMutI	CAGTG	6 cut(s)	733, 788, 1009, 1216, 1229, 1711
BveI	ACCTGC	3 cut(s)	323, 889, 1423
Cac8I	GCNNGC	3 cut(s)	651, 1059, 1959
CaiI	CAGNNNCTG	1 cut(s)	1016
CciI	TCATGA	2 cut(s)	706, 1846
CfoI	GCGC	2 cut(s)	1237, 1425
Cfr10I	RCCGGY	1 cut(s)	1204
Cfr13I	GGNCC	9 cut(s)	61, 392, 1190, 1286, 1655, 1685, 1751, 1834, 1940
CseI	GACGC	7 cut(s)	1424, 1454, 1484, 1514, 1544, 1574, 1604
CsiI	ACCWGGT	2 cut(s)	1581, 1611
CspCI	CAANNNNNGTGG	2 cut(s)	1012, 1047
DdeI	CTNAG	8 cut(s)	95, 120, 285, 299, 1017, 1062, 1773, 2052
DpnI	GATC	4 cut(s)	403, 717, 734, 906
DpnII	GATC	4 cut(s)	401, 715, 732, 904
DraI	TTTAAA	1 cut(s)	868
EaeI	YGGCCR	1 cut(s)	1797
Eam1104I	CTCTTC	2 cut(s)	1323, 1873
EarI	CTCTTC	2 cut(s)	1323, 1873
Eco130I	CCWWGG	2 cut(s)	1282, 2106
Eco47I	GGWCC	5 cut(s)	61, 392, 1190, 1834, 1940
Eco57I	CTGAAG	2 cut(s)	632, 1347
Eco88I	CYCGRG	1 cut(s)	1950
EcoNI	CCTNNNNNAGG	3 cut(s)	62, 1520, 1550
EcoO109I	RGGNCCY	3 cut(s)	1190, 1655, 1685
EcoRII	CCWGG	6 cut(s)	57, 63, 310, 519, 1581, 1611
EcoT14I	CCWWGG	2 cut(s)	1282, 2106
EcoT22I	ATGCAT	1 cut(s)	1704
ErhI	CCWWGG	2 cut(s)	1282, 2106
Esp3I	CGTCTC	1 cut(s)	90
FalI	AAGNNNNNCTT	4 cut(s)	731, 763, 1950, 1982
FaqI	GGGAC	4 cut(s)	365, 1212, 1820, 1896
FauI	CCCGC	1 cut(s)	1929
FbaI	TGATCA	1 cut(s)	715
Fnu4HI	GCNGC	1 cut(s)	1824
FokI	GGATG	6 cut(s)	220, 634, 977, 1865, 1875, 1903
Fsp4HI	GCNGC	1 cut(s)	1824
FspBI	CTAG	7 cut(s)	1487, 1517, 1547, 1908, 2039, 2093, 2147
GlaI	GCGC	2 cut(s)	1236, 1424
GluI	GCNGC	1 cut(s)	1824
GsuI	CTGGAG	3 cut(s)	186, 503, 1707
HaeIII	GGCC	6 cut(s)	771, 1287, 1656, 1686, 1752, 1799
HapII	CCGG	1 cut(s)	1205
HgaI	GACGC	7 cut(s)	1424, 1454, 1484, 1514, 1544, 1574, 1604
HhaI	GCGC	2 cut(s)	1237, 1425
Hin1I	GRCGYC	3 cut(s)	1446, 1476, 1506
Hin6I	GCGC	2 cut(s)	1235, 1423
HinP1I	GCGC	2 cut(s)	1235, 1423
HincII	GTYRAC	1 cut(s)	745
HindII	GTYRAC	1 cut(s)	745
HpaI	GTTAAC	1 cut(s)	745
HpaII	CCGG	1 cut(s)	1205
HphI	GGTGA	4 cut(s)	257, 914, 1779, 1893
Hpy166II	GTNNAC	2 cut(s)	745, 1023
Hpy8I	GTNNAC	2 cut(s)	745, 1023
HpyAV	CCTTC	7 cut(s)	733, 1721, 1794, 1821, 1839, 1848, 1908
HpyCH4III	ACNGT	3 cut(s)	81, 671, 1220
HpyCH4IV	ACGT	2 cut(s)	925, 1674
HpyF10VI	GCNNNNNNNGC	5 cut(s)	1330, 1429, 1438, 1708, 1954
HpyF3I	CTNAG	8 cut(s)	95, 120, 285, 299, 1017, 1062, 1773, 2052
HpySE526I	ACGT	2 cut(s)	925, 1674
Hsp92I	GRCGYC	3 cut(s)	1446, 1476, 1506
HspAI	GCGC	2 cut(s)	1235, 1423
Ksp22I	TGATCA	1 cut(s)	715
KspAI	GTTAAC	1 cut(s)	745
Kzo9I	GATC	4 cut(s)	401, 715, 732, 904
LguI	GCTCTTC	1 cut(s)	1323
LmnI	GCTCC	3 cut(s)	646, 1125, 1831
LweI	GCATC	3 cut(s)	470, 567, 796
MabI	ACCWGGT	2 cut(s)	1581, 1611
MaeI	CTAG	7 cut(s)	1487, 1517, 1547, 1908, 2039, 2093, 2147
MaeII	ACGT	2 cut(s)	925, 1674
MaeIII	GTNAC	5 cut(s)	249, 892, 1004, 1012, 1038
MalI	GATC	4 cut(s)	403, 717, 734, 906
MbiI	CCGCTC	1 cut(s)	1844
MboI	GATC	4 cut(s)	401, 715, 732, 904
MfeI	CAATTG	1 cut(s)	1029
MflI	RGATCY	1 cut(s)	401
MhlI	GDGCHC	2 cut(s)	475, 931
MlsI	TGGCCA	1 cut(s)	1799
MluNI	TGGCCA	1 cut(s)	1799
MlyI	GAGTC	3 cut(s)	44, 808, 1028
Mox20I	TGGCCA	1 cut(s)	1799
Mph1103I	ATGCAT	1 cut(s)	1704
MroXI	GAANNNNTTC	6 cut(s)	1365, 1404, 1464, 1494, 1524, 1554
MscI	TGGCCA	1 cut(s)	1799
MseI	TTAA	6 cut(s)	423, 744, 765, 867, 1127, 1977
MslI	CAYNNNNRTG	6 cut(s)	605, 711, 827, 1281, 1746, 1851
Msp20I	TGGCCA	1 cut(s)	1799
MspA1I	CMGCKG	1 cut(s)	593
MspI	CCGG	1 cut(s)	1205
MspR9I	CCNGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
MunI	CAATTG	1 cut(s)	1029
MvaI	CCWGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
MwoI	GCNNNNNNNGC	5 cut(s)	1330, 1429, 1438, 1708, 1954
NcoI	CCATGG	1 cut(s)	1282
NdeII	GATC	4 cut(s)	401, 715, 732, 904
NlaIV	GGNNCC	6 cut(s)	337, 508, 1092, 1191, 1827, 1836
NmuCI	GTSAC	2 cut(s)	892, 1004
NsiI	ATGCAT	1 cut(s)	1704
NspI	RCATGY	3 cut(s)	1039, 1061, 1886
OliI	CACNNNNGTG	1 cut(s)	1746
PaeI	GCATGC	1 cut(s)	1061
PagI	TCATGA	2 cut(s)	706, 1846
PaqCI	CACCTGC	1 cut(s)	323
PasI	CCCWGGG	1 cut(s)	311
PciI	ACATGT	2 cut(s)	1035, 1882
PciSI	GCTCTTC	1 cut(s)	1323
PdmI	GAANNNNTTC	6 cut(s)	1365, 1404, 1464, 1494, 1524, 1554
PfeI	GAWTC	8 cut(s)	68, 259, 587, 662, 836, 2048, 2077, 2102
PflMI	CCANNNNNTGG	2 cut(s)	1155, 1937
PfoI	TCCNGGA	1 cut(s)	519
PkrI	GCNGC	1 cut(s)	1825
PleI	GAGTC	3 cut(s)	44, 808, 1027
PpsI	GAGTC	3 cut(s)	44, 808, 1027
PpuMI	RGGWCCY	1 cut(s)	1190
PscI	ACATGT	2 cut(s)	1035, 1882
Psp5II	RGGWCCY	1 cut(s)	1190
Psp6I	CCWGG	6 cut(s)	57, 63, 310, 519, 1581, 1611
PspGI	CCWGG	6 cut(s)	57, 63, 310, 519, 1581, 1611
PspN4I	GGNNCC	6 cut(s)	337, 508, 1092, 1191, 1827, 1836
PspPI	GGNCC	9 cut(s)	61, 392, 1190, 1286, 1655, 1685, 1751, 1834, 1940
PspPPI	RGGWCCY	1 cut(s)	1190
PstI	CTGCAG	1 cut(s)	334
PstNI	CAGNNNCTG	1 cut(s)	1016
PsuI	RGATCY	1 cut(s)	401
PvuII	CAGCTG	1 cut(s)	593
RseI	CAYNNNNRTG	6 cut(s)	605, 711, 827, 1281, 1746, 1851
SapI	GCTCTTC	1 cut(s)	1323
SaqAI	TTAA	6 cut(s)	423, 744, 765, 867, 1127, 1977
SatI	GCNGC	1 cut(s)	1824
Sau3AI	GATC	4 cut(s)	401, 715, 732, 904
Sau96I	GGNCC	9 cut(s)	61, 392, 1190, 1286, 1655, 1685, 1751, 1834, 1940
SchI	GAGTC	3 cut(s)	44, 808, 1028
ScrFI	CCNGG	6 cut(s)	59, 65, 312, 521, 1583, 1613
SduI	GDGCHC	2 cut(s)	475, 931
SexAI	ACCWGGT	2 cut(s)	1581, 1611
SfaNI	GCATC	3 cut(s)	470, 567, 796
SfcI	CTRYAG	1 cut(s)	330
SinI	GGWCC	5 cut(s)	61, 392, 1190, 1834, 1940
SmiMI	CAYNNNNRTG	6 cut(s)	605, 711, 827, 1281, 1746, 1851
SmlI	CTYRAG	2 cut(s)	1052, 1967
SmoI	CTYRAG	2 cut(s)	1052, 1967
SphI	GCATGC	1 cut(s)	1061
SsiI	CCGC	6 cut(s)	9, 131, 1823, 1842, 1922, 2113
SspI	AATATT	1 cut(s)	984
SspMI	CTAG	7 cut(s)	1487, 1517, 1547, 1908, 2039, 2093, 2147
StyD4I	CCNGG	6 cut(s)	57, 63, 310, 519, 1581, 1611
StyI	CCWWGG	2 cut(s)	1282, 2106
TaaI	ACNGT	3 cut(s)	81, 671, 1220
TaiI	ACGT	2 cut(s)	928, 1677
TaqI	TCGA	3 cut(s)	262, 826, 2080
TaqII	GACCGA	1 cut(s)	1822
TauI	GCSGC	1 cut(s)	1826
TfiI	GAWTC	8 cut(s)	68, 259, 587, 662, 836, 2048, 2077, 2102
Tru1I	TTAA	6 cut(s)	423, 744, 765, 867, 1127, 1977
Tru9I	TTAA	6 cut(s)	423, 744, 765, 867, 1127, 1977
TscAI	CASTG	6 cut(s)	733, 795, 1009, 1223, 1229, 1718
TseFI	GTSAC	2 cut(s)	892, 1004
Tsp45I	GTSAC	2 cut(s)	892, 1004
TspDTI	ATGAA	5 cut(s)	356, 480, 1877, 1925, 2058
TspGWI	ACGGA	1 cut(s)	2015
TspRI	CASTG	6 cut(s)	733, 795, 1009, 1223, 1229, 1718
Van91I	CCANNNNNTGG	2 cut(s)	1155, 1937
VpaK11BI	GGWCC	5 cut(s)	61, 392, 1190, 1834, 1940
XagI	CCTNNNNNAGG	3 cut(s)	62, 1520, 1550
XapI	RAATTY	4 cut(s)	1069, 1764, 1994, 2130
XbaI	TCTAGA	3 cut(s)	2038, 2092, 2146
XceI	RCATGY	3 cut(s)	1039, 1061, 1886
XmnI	GAANNNNTTC	6 cut(s)	1365, 1404, 1464, 1494, 1524, 1554
XspI	CTAG	7 cut(s)	1487, 1517, 1547, 1908, 2039, 2093, 2147
Zsp2I	ATGCAT	1 cut(s)	1704

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.