Rorug06G0315200

ATP sulfurylase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
46650843 .. 46651094
252 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0315200.1

Sequence Viewer

Length: 252 bp
ATGGAATCCAACCCTATAGCAGCTATGGGTCCTGGAAGAGCTATATGGACATGGATTAAAGACACTGAGAGCACAACAAATCGAGGGAGTGACTGTGCGGCTTTGACACTTTGGAAAGGTCGAAGGAAAAATGTCTTTTCTACTGGTTTCAGAACCACCGAGCGAGAGAGAGGAAGAAGTGACAACGGTGAACTCACGTCCATGCCTCTGTCTCACTCTAAGGAACAACAACTACTTTGGAGTAACAAATAA

Protein Analysis

83

Amino Acids

9.39

Weight (kDa)

9.85

Isoelectric Point (pI)

34.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013918)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19920
fragaria_vesca FvH4_2g38710
malus_domestica MD08G1014800.v1.1 MD15G1014100.v1.1
prunus_persica Prupe.1G367700_v2.0.a1
pyrus_communis pycom08g01320 pycom15g01220
rosa_chinensis RchiOBHm_Chr6g0302601
rosa_laevigata RLG00000011158
rosa_multiflora Rmu_sc0005455.1_g000010
rosa_roxburghii Rroxscaffold_7G00165530
rosa_rugosa Rorug06G0315200
rosa_samantha Rh6AG428600 Rh6BG473900 Rh6CG440800 Rh6DG427600
rosa_wichuraiana Rw6G037090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 98
AjiI CACGTC 1 cut(s) 198
AjnI CCWGG 1 cut(s) 31
AluBI AGCT 2 cut(s) 23, 41
AluI AGCT 2 cut(s) 23, 41
Alw21I GWGCWC 1 cut(s) 74
Alw26I GTCTC 1 cut(s) 216
ApeKI GCWGC 1 cut(s) 20
AspS9I GGNCC 1 cut(s) 29
AsuHPI GGTGA 1 cut(s) 200
AvaII GGWCC 1 cut(s) 29
Bbv12I GWGCWC 1 cut(s) 74
BbvI GCAGC 1 cut(s) 32
BciT130I CCWGG 1 cut(s) 33
BcoDI GTCTC 1 cut(s) 216
BfmI CTRYAG 1 cut(s) 15
BisI GCNGC 2 cut(s) 21, 99
BlsI GCNGC 2 cut(s) 22, 100
Bme1390I CCNGG 1 cut(s) 33
Bme18I GGWCC 1 cut(s) 29
BmgBI CACGTC 1 cut(s) 198
BmgT120I GGNCC 1 cut(s) 29
BmiI GGNNCC 1 cut(s) 30
BmrFI CCNGG 1 cut(s) 33
BsaXI ACNNNNNCTCC 2 cut(s) 79, 109
Bse1I ACTGG 1 cut(s) 148
BseBI CCWGG 1 cut(s) 33
BseMII CTCAG 1 cut(s) 57
BseNI ACTGG 1 cut(s) 148
BseXI GCAGC 1 cut(s) 32
BsiHKAI GWGCWC 1 cut(s) 74
BsmAI GTCTC 1 cut(s) 216
Bsp1286I GDGCHC 1 cut(s) 74
BspACI CCGC 1 cut(s) 98
BspCNI CTCAG 1 cut(s) 58
BspLI GGNNCC 1 cut(s) 30
BspQI GCTCTTC 1 cut(s) 31
BsrI ACTGG 1 cut(s) 148
Bst2UI CCWGG 1 cut(s) 33
Bst4CI ACNGT 2 cut(s) 95, 188
Bst6I CTCTTC 1 cut(s) 31
BstDEI CTNAG 2 cut(s) 66, 219
BstMAI GTCTC 1 cut(s) 216
BstNI CCWGG 1 cut(s) 33
BstSCI CCNGG 1 cut(s) 31
BstSFI CTRYAG 1 cut(s) 15
BstV1I GCAGC 1 cut(s) 32
BtrI CACGTC 1 cut(s) 198
BtsIMutI CAGTG 1 cut(s) 63
Cfr13I GGNCC 1 cut(s) 29
CviAII CATG 2 cut(s) 51, 202
CviJI RGCY 3 cut(s) 23, 41, 101
CviKI_1 RGCY 3 cut(s) 23, 41, 101
DdeI CTNAG 2 cut(s) 66, 219
Eam1104I CTCTTC 1 cut(s) 31
EarI CTCTTC 1 cut(s) 31
Eco47I GGWCC 1 cut(s) 29
EcoO109I RGGNCCY 1 cut(s) 29
EcoRII CCWGG 1 cut(s) 31
FaeI CATG 2 cut(s) 54, 205
FaiI YATR 6 cut(s) 17, 26, 44, 46, 52, 203
FatI CATG 2 cut(s) 50, 201
Fnu4HI GCNGC 2 cut(s) 21, 99
Fsp4HI GCNGC 2 cut(s) 21, 99
GluI GCNGC 2 cut(s) 21, 99
Hin1II CATG 2 cut(s) 54, 205
HinfI GANTC 1 cut(s) 5
HphI GGTGA 1 cut(s) 200
Hpy166II GTNNAC 1 cut(s) 191
Hpy188I TCNGA 1 cut(s) 152
Hpy8I GTNNAC 1 cut(s) 191
HpyAV CCTTC 1 cut(s) 117
HpyCH4III ACNGT 2 cut(s) 95, 188
HpyCH4IV ACGT 1 cut(s) 197
HpyF3I CTNAG 2 cut(s) 66, 219
HpySE526I ACGT 1 cut(s) 197
Hsp92II CATG 2 cut(s) 54, 205
LguI GCTCTTC 1 cut(s) 31
LpnPI CCDG 3 cut(s) 18, 45, 129
Lsp1109I GCAGC 1 cut(s) 32
MaeII ACGT 1 cut(s) 197
MaeIII GTNAC 3 cut(s) 89, 179, 242
MboII GAAGA 2 cut(s) 48, 186
MhlI GDGCHC 1 cut(s) 74
MmeI TCCRAC 1 cut(s) 33
MnlI CCTC 3 cut(s) 77, 164, 216
MseI TTAA 1 cut(s) 57
MslI CAYNNNNRTG 1 cut(s) 200
MspR9I CCNGG 1 cut(s) 33
MvaI CCWGG 1 cut(s) 33
NlaIII CATG 2 cut(s) 54, 205
NlaIV GGNNCC 1 cut(s) 30
NmuCI GTSAC 2 cut(s) 89, 179
PciSI GCTCTTC 1 cut(s) 31
PfeI GAWTC 1 cut(s) 5
PfoI TCCNGGA 1 cut(s) 31
PkrI GCNGC 2 cut(s) 22, 100
PpuMI RGGWCCY 1 cut(s) 29
Psp5II RGGWCCY 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 31
PspGI CCWGG 1 cut(s) 31
PspN4I GGNNCC 1 cut(s) 30
PspPI GGNCC 1 cut(s) 29
PspPPI RGGWCCY 1 cut(s) 29
PsrI GAACNNNNNNTAC 2 cut(s) 216, 248
RseI CAYNNNNRTG 1 cut(s) 200
SapI GCTCTTC 1 cut(s) 31
SaqAI TTAA 1 cut(s) 57
SatI GCNGC 2 cut(s) 21, 99
Sau96I GGNCC 1 cut(s) 29
ScrFI CCNGG 1 cut(s) 33
SduI GDGCHC 1 cut(s) 74
SetI ASST 4 cut(s) 25, 43, 121, 200
SfcI CTRYAG 1 cut(s) 15
SgeI CNNG 9 cut(s) 44, 45, 63, 95, 156, 172, 176, 208, 214
SinI GGWCC 1 cut(s) 29
SmiMI CAYNNNNRTG 1 cut(s) 200
SsiI CCGC 1 cut(s) 98
StyD4I CCNGG 1 cut(s) 31
TaaI ACNGT 2 cut(s) 95, 188
TaiI ACGT 1 cut(s) 200
TaqI TCGA 2 cut(s) 82, 121
TauI GCSGC 1 cut(s) 101
TfiI GAWTC 1 cut(s) 5
Tru1I TTAA 1 cut(s) 57
Tru9I TTAA 1 cut(s) 57
TscAI CASTG 1 cut(s) 70
TseFI GTSAC 2 cut(s) 89, 179
TseI GCWGC 1 cut(s) 20
Tsp45I GTSAC 2 cut(s) 89, 179
TspRI CASTG 1 cut(s) 70
VpaK11BI GGWCC 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.