Belongs to the complex I LYR family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G76060 |
| fragaria_vesca | FvH4_2g37980 |
| malus_domestica | MD08G1008000.v1.1 |
| prunus_persica | Prupe.1G359800_v2.0.a1 |
| pyrus_communis | pycom08g00650 |
| rosa_chinensis | RchiOBHm_Chr6g0303641 |
| rosa_laevigata | RLG00000011065 |
| rosa_roxburghii | Rroxscaffold_7G00164550 |
| rosa_rugosa | Rorug02G0244700 Rorug06G0323200 |
| rosa_samantha | Rh6AG437500 Rh6CG449500 |
| rosa_wichuraiana | Rw6G037880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 464 |
| Acc16I | TGCGCA | 1 cut(s) | 1271 |
| AciI | CCGC | 3 cut(s) | 598, 622, 1243 |
| AclWI | GGATC | 4 cut(s) | 524, 571, 826, 1111 |
| AcsI | RAATTY | 4 cut(s) | 13, 276, 1783, 1849 |
| AfaI | GTAC | 3 cut(s) | 264, 680, 866 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 465, 1833 |
| AflIII | ACRYGT | 2 cut(s) | 645, 1327 |
| AjiI | CACGTC | 1 cut(s) | 1328 |
| AjnI | CCWGG | 2 cut(s) | 769, 1139 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1502, 1534 |
| Alw26I | GTCTC | 1 cut(s) | 1312 |
| AlwI | GGATC | 4 cut(s) | 524, 571, 826, 1111 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 527 |
| Ama87I | CYCGRG | 1 cut(s) | 1664 |
| AoxI | GGCC | 4 cut(s) | 38, 579, 1480, 1532 |
| ApeKI | GCWGC | 2 cut(s) | 624, 1640 |
| ApoI | RAATTY | 4 cut(s) | 13, 276, 1783, 1849 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 393, 1626 |
| AspLEI | GCGC | 2 cut(s) | 494, 1272 |
| AspS9I | GGNCC | 5 cut(s) | 39, 603, 767, 1297, 1741 |
| AsuC2I | CCSGG | 4 cut(s) | 440, 489, 1665, 1666 |
| AsuHPI | GGTGA | 8 cut(s) | 134, 771, 785, 792, 928, 1223, 1421, 1810 |
| AsuII | TTCGAA | 2 cut(s) | 1093, 1630 |
| AvaI | CYCGRG | 1 cut(s) | 1664 |
| AvaII | GGWCC | 4 cut(s) | 603, 767, 1297, 1741 |
| AxyI | CCTNAGG | 1 cut(s) | 1121 |
| BbsI | GAAGAC | 3 cut(s) | 476, 476, 1133 |
| BbvCI | CCTCAGC | 1 cut(s) | 84 |
| BbvI | GCAGC | 2 cut(s) | 636, 1627 |
| BccI | CCATC | 7 cut(s) | 2, 735, 973, 1335, 1751, 1789, 1921 |
| BceAI | ACGGC | 1 cut(s) | 1780 |
| BciT130I | CCWGG | 2 cut(s) | 771, 1141 |
| BclI | TGATCA | 1 cut(s) | 1692 |
| BcnI | CCSGG | 4 cut(s) | 440, 489, 1665, 1666 |
| BcoDI | GTCTC | 1 cut(s) | 1312 |
| BfaI | CTAG | 4 cut(s) | 332, 377, 1184, 1833 |
| BfmI | CTRYAG | 1 cut(s) | 1051 |
| BisI | GCNGC | 3 cut(s) | 622, 625, 1641 |
| BlsI | GCNGC | 3 cut(s) | 623, 626, 1642 |
| Bme1390I | CCNGG | 6 cut(s) | 440, 489, 771, 1141, 1665, 1666 |
| Bme18I | GGWCC | 4 cut(s) | 603, 767, 1297, 1741 |
| BmeT110I | CYCGRG | 1 cut(s) | 1664 |
| BmgBI | CACGTC | 1 cut(s) | 1328 |
| BmgT120I | GGNCC | 5 cut(s) | 39, 603, 767, 1297, 1741 |
| BmiI | GGNNCC | 3 cut(s) | 748, 1743, 1921 |
| BmrFI | CCNGG | 6 cut(s) | 440, 489, 771, 1141, 1665, 1666 |
| BmsI | GCATC | 2 cut(s) | 254, 1257 |
| BoxI | GACNNNNGTC | 1 cut(s) | 50 |
| BpiI | GAAGAC | 3 cut(s) | 476, 476, 1133 |
| BpmI | CTGGAG | 2 cut(s) | 1297, 1428 |
| Bpu10I | CCTNAGC | 2 cut(s) | 84, 1304 |
| Bpu14I | TTCGAA | 2 cut(s) | 1093, 1630 |
| BpuEI | CTTGAG | 2 cut(s) | 637, 844 |
| BpuMI | CCSGG | 4 cut(s) | 440, 489, 1665, 1666 |
| BsaJI | CCNNGG | 4 cut(s) | 438, 1139, 1140, 1664 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 340, 370, 1502, 1532 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 465, 1833 |
| Bse118I | RCCGGY | 2 cut(s) | 600, 1406 |
| Bse1I | ACTGG | 4 cut(s) | 54, 521, 1280, 1535 |
| Bse21I | CCTNAGG | 1 cut(s) | 1121 |
| Bse3DI | GCAATG | 2 cut(s) | 418, 1227 |
| BseBI | CCWGG | 2 cut(s) | 771, 1141 |
| BseDI | CCNNGG | 4 cut(s) | 438, 1139, 1140, 1664 |
| BseGI | GGATG | 2 cut(s) | 1346, 1903 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 465, 1833 |
| BseMI | GCAATG | 2 cut(s) | 418, 1227 |
| BseMII | CTCAG | 5 cut(s) | 75, 943, 1187, 1536, 1782 |
| BseNI | ACTGG | 4 cut(s) | 54, 521, 1280, 1535 |
| BseRI | GAGGAG | 4 cut(s) | 303, 345, 574, 1161 |
| BseXI | GCAGC | 2 cut(s) | 636, 1627 |
| BseYI | CCCAGC | 1 cut(s) | 663 |
| BshFI | GGCC | 4 cut(s) | 40, 581, 1482, 1534 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1664 |
| BsiSI | CCGG | 6 cut(s) | 220, 440, 489, 601, 1407, 1665 |
| BslFI | GGGAC | 2 cut(s) | 436, 1727 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 465, 1833 |
| BsmAI | GTCTC | 1 cut(s) | 1312 |
| BsmBI | CGTCTC | 1 cut(s) | 1312 |
| BsmFI | GGGAC | 2 cut(s) | 436, 1727 |
| BsmI | GAATGC | 1 cut(s) | 409 |
| BsnI | GGCC | 4 cut(s) | 40, 581, 1482, 1534 |
| BsoBI | CYCGRG | 1 cut(s) | 1664 |
| Bsp119I | TTCGAA | 2 cut(s) | 1093, 1630 |
| BspACI | CCGC | 3 cut(s) | 598, 622, 1243 |
| BspANI | GGCC | 4 cut(s) | 40, 581, 1482, 1534 |
| BspCNI | CTCAG | 5 cut(s) | 76, 942, 1186, 1535, 1781 |
| BspLI | GGNNCC | 3 cut(s) | 748, 1743, 1921 |
| BspPI | GGATC | 4 cut(s) | 524, 571, 826, 1111 |
| BspT104I | TTCGAA | 2 cut(s) | 1093, 1630 |
| BsrDI | GCAATG | 2 cut(s) | 418, 1227 |
| BsrFI | RCCGGY | 2 cut(s) | 600, 1406 |
| BsrI | ACTGG | 4 cut(s) | 54, 521, 1280, 1535 |
| BssAI | RCCGGY | 2 cut(s) | 600, 1406 |
| BssECI | CCNNGG | 4 cut(s) | 438, 1139, 1140, 1664 |
| Bst2UI | CCWGG | 2 cut(s) | 771, 1141 |
| Bst4CI | ACNGT | 6 cut(s) | 678, 683, 795, 910, 1810, 1824 |
| Bst6I | CTCTTC | 2 cut(s) | 123, 1471 |
| BstBI | TTCGAA | 2 cut(s) | 1093, 1630 |
| BstC8I | GCNNGC | 5 cut(s) | 29, 163, 409, 880, 884 |
| BstDEI | CTNAG | 7 cut(s) | 84, 929, 1121, 1173, 1304, 1522, 1768 |
| BstEII | GGTNACC | 1 cut(s) | 503 |
| BstF5I | GGATG | 2 cut(s) | 1346, 1903 |
| BstHHI | GCGC | 2 cut(s) | 494, 1272 |
| BstMAI | GTCTC | 1 cut(s) | 1312 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 37 |
| BstNI | CCWGG | 2 cut(s) | 771, 1141 |
| BstNSI | RCATGY | 3 cut(s) | 165, 649, 1021 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 50 |
| BstPI | GGTNACC | 1 cut(s) | 503 |
| BstSCI | CCNGG | 6 cut(s) | 438, 487, 769, 1139, 1663, 1664 |
| BstSFI | CTRYAG | 1 cut(s) | 1051 |
| BstV1I | GCAGC | 2 cut(s) | 636, 1627 |
| BstV2I | GAAGAC | 3 cut(s) | 476, 476, 1133 |
| BstX2I | RGATCY | 1 cut(s) | 1116 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 49 |
| BstYI | RGATCY | 1 cut(s) | 1116 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1121 |
| BsuRI | GGCC | 4 cut(s) | 40, 581, 1482, 1534 |
| BtrI | CACGTC | 1 cut(s) | 1328 |
| BtsCI | GGATG | 2 cut(s) | 1346, 1903 |
| BtsIMutI | CAGTG | 2 cut(s) | 47, 688 |
| Cac8I | GCNNGC | 5 cut(s) | 29, 163, 409, 880, 884 |
| CaiI | CAGNNNCTG | 1 cut(s) | 527 |
| CfoI | GCGC | 2 cut(s) | 494, 1272 |
| Cfr10I | RCCGGY | 2 cut(s) | 600, 1406 |
| Cfr13I | GGNCC | 5 cut(s) | 39, 603, 767, 1297, 1741 |
| Cfr9I | CCCGGG | 1 cut(s) | 1664 |
| CseI | GACGC | 1 cut(s) | 251 |
| CsiI | ACCWGGT | 1 cut(s) | 769 |
| Csp6I | GTAC | 3 cut(s) | 263, 679, 865 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1857, 1892 |
| CviQI | GTAC | 3 cut(s) | 263, 679, 865 |
| DdeI | CTNAG | 7 cut(s) | 84, 929, 1121, 1173, 1304, 1522, 1768 |
| Eam1104I | CTCTTC | 2 cut(s) | 123, 1471 |
| EarI | CTCTTC | 2 cut(s) | 123, 1471 |
| Eco147I | AGGCCT | 2 cut(s) | 581, 1482 |
| Eco47I | GGWCC | 4 cut(s) | 603, 767, 1297, 1741 |
| Eco81I | CCTNAGG | 1 cut(s) | 1121 |
| Eco88I | CYCGRG | 1 cut(s) | 1664 |
| Eco91I | GGTNACC | 1 cut(s) | 503 |
| EcoO65I | GGTNACC | 1 cut(s) | 503 |
| EcoRI | GAATTC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 2 cut(s) | 769, 1139 |
| Esp3I | CGTCTC | 1 cut(s) | 1312 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 327, 359 |
| FaqI | GGGAC | 2 cut(s) | 436, 1727 |
| FbaI | TGATCA | 1 cut(s) | 1692 |
| Fnu4HI | GCNGC | 3 cut(s) | 622, 625, 1641 |
| FokI | GGATG | 2 cut(s) | 1353, 1910 |
| Fsp4HI | GCNGC | 3 cut(s) | 622, 625, 1641 |
| FspBI | CTAG | 4 cut(s) | 332, 377, 1184, 1833 |
| FspI | TGCGCA | 1 cut(s) | 1271 |
| GlaI | GCGC | 2 cut(s) | 493, 1271 |
| GluI | GCNGC | 3 cut(s) | 622, 625, 1641 |
| GsaI | CCCAGC | 1 cut(s) | 667 |
| GsuI | CTGGAG | 2 cut(s) | 1297, 1428 |
| HaeIII | GGCC | 4 cut(s) | 40, 581, 1482, 1534 |
| HapII | CCGG | 6 cut(s) | 220, 440, 489, 601, 1407, 1665 |
| HgaI | GACGC | 1 cut(s) | 251 |
| HhaI | GCGC | 2 cut(s) | 494, 1272 |
| Hin6I | GCGC | 2 cut(s) | 492, 1270 |
| HinP1I | GCGC | 2 cut(s) | 492, 1270 |
| HindIII | AAGCTT | 3 cut(s) | 29, 1036, 1857 |
| HinfI | GANTC | 9 cut(s) | 328, 472, 548, 776, 1197, 1511, 1565, 1622, 1669 |
| HpaII | CCGG | 6 cut(s) | 220, 440, 489, 601, 1407, 1665 |
| HphI | GGTGA | 8 cut(s) | 134, 771, 785, 792, 928, 1223, 1421, 1810 |
| Hpy166II | GTNNAC | 2 cut(s) | 1540, 1616 |
| Hpy188III | TCNNGA | 6 cut(s) | 55, 73, 172, 332, 386, 527 |
| Hpy8I | GTNNAC | 2 cut(s) | 1540, 1616 |
| Hpy99I | CGWCG | 1 cut(s) | 678 |
| HpyAV | CCTTC | 8 cut(s) | 525, 571, 598, 946, 1069, 1288, 1343, 1496 |
| HpyCH4III | ACNGT | 6 cut(s) | 678, 683, 795, 910, 1810, 1824 |
| HpyCH4IV | ACGT | 2 cut(s) | 261, 1327 |
| HpyCH4V | TGCA | 5 cut(s) | 165, 1027, 1250, 1752, 1775 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 37 |
| HpyF3I | CTNAG | 7 cut(s) | 84, 929, 1121, 1173, 1304, 1522, 1768 |
| HpySE526I | ACGT | 2 cut(s) | 261, 1327 |
| HspAI | GCGC | 2 cut(s) | 492, 1270 |
| Ksp22I | TGATCA | 1 cut(s) | 1692 |
| LmnI | GCTCC | 1 cut(s) | 1919 |
| Lsp1109I | GCAGC | 2 cut(s) | 636, 1627 |
| LweI | GCATC | 2 cut(s) | 254, 1257 |
| MabI | ACCWGGT | 1 cut(s) | 769 |
| MaeI | CTAG | 4 cut(s) | 332, 377, 1184, 1833 |
| MaeII | ACGT | 2 cut(s) | 261, 1327 |
| MaeIII | GTNAC | 9 cut(s) | 253, 503, 719, 777, 787, 1578, 1646, 1760, 1836 |
| MfeI | CAATTG | 4 cut(s) | 534, 1490, 1747, 1841 |
| MflI | RGATCY | 1 cut(s) | 1116 |
| MlyI | GAGTC | 4 cut(s) | 466, 785, 1520, 1574 |
| MmeI | TCCRAC | 3 cut(s) | 525, 1394, 1697 |
| MroXI | GAANNNNTTC | 2 cut(s) | 393, 1626 |
| MseI | TTAA | 4 cut(s) | 194, 905, 1146, 1572 |
| MslI | CAYNNNNRTG | 3 cut(s) | 632, 650, 1796 |
| MspI | CCGG | 6 cut(s) | 220, 440, 489, 601, 1407, 1665 |
| MspR9I | CCNGG | 6 cut(s) | 440, 489, 771, 1141, 1665, 1666 |
| MunI | CAATTG | 4 cut(s) | 534, 1490, 1747, 1841 |
| Mva1269I | GAATGC | 1 cut(s) | 409 |
| MvaI | CCWGG | 2 cut(s) | 771, 1141 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 37 |
| NciI | CCSGG | 4 cut(s) | 440, 489, 1665, 1666 |
| NlaIV | GGNNCC | 3 cut(s) | 748, 1743, 1921 |
| NmuCI | GTSAC | 7 cut(s) | 719, 777, 787, 1578, 1646, 1760, 1836 |
| NsbI | TGCGCA | 1 cut(s) | 1271 |
| NspI | RCATGY | 3 cut(s) | 165, 649, 1021 |
| NspV | TTCGAA | 2 cut(s) | 1093, 1630 |
| PaeI | GCATGC | 1 cut(s) | 165 |
| PasI | CCCWGGG | 1 cut(s) | 1140 |
| PceI | AGGCCT | 2 cut(s) | 581, 1482 |
| PciI | ACATGT | 1 cut(s) | 645 |
| PctI | GAATGC | 1 cut(s) | 409 |
| PdmI | GAANNNNTTC | 2 cut(s) | 393, 1626 |
| PfeI | GAWTC | 5 cut(s) | 328, 548, 1197, 1622, 1669 |
| PkrI | GCNGC | 3 cut(s) | 623, 626, 1642 |
| PleI | GAGTC | 4 cut(s) | 466, 784, 1519, 1573 |
| PpsI | GAGTC | 4 cut(s) | 466, 784, 1519, 1573 |
| PscI | ACATGT | 1 cut(s) | 645 |
| PshAI | GACNNNNGTC | 1 cut(s) | 50 |
| PsiI | TTATAA | 1 cut(s) | 464 |
| Psp6I | CCWGG | 2 cut(s) | 769, 1139 |
| PspEI | GGTNACC | 1 cut(s) | 503 |
| PspFI | CCCAGC | 1 cut(s) | 663 |
| PspGI | CCWGG | 2 cut(s) | 769, 1139 |
| PspN4I | GGNNCC | 3 cut(s) | 748, 1743, 1921 |
| PspPI | GGNCC | 5 cut(s) | 39, 603, 767, 1297, 1741 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 848, 880 |
| PstNI | CAGNNNCTG | 1 cut(s) | 527 |
| PsuI | RGATCY | 1 cut(s) | 1116 |
| RsaI | GTAC | 3 cut(s) | 264, 680, 866 |
| RsaNI | GTAC | 3 cut(s) | 263, 679, 865 |
| RseI | CAYNNNNRTG | 3 cut(s) | 632, 650, 1796 |
| SaqAI | TTAA | 4 cut(s) | 194, 905, 1146, 1572 |
| SatI | GCNGC | 3 cut(s) | 622, 625, 1641 |
| Sau96I | GGNCC | 5 cut(s) | 39, 603, 767, 1297, 1741 |
| SchI | GAGTC | 4 cut(s) | 466, 785, 1520, 1574 |
| ScrFI | CCNGG | 6 cut(s) | 440, 489, 771, 1141, 1665, 1666 |
| SexAI | ACCWGGT | 1 cut(s) | 769 |
| SfaNI | GCATC | 2 cut(s) | 254, 1257 |
| SfcI | CTRYAG | 1 cut(s) | 1051 |
| SfuI | TTCGAA | 2 cut(s) | 1093, 1630 |
| SinI | GGWCC | 4 cut(s) | 603, 767, 1297, 1741 |
| SmaI | CCCGGG | 1 cut(s) | 1666 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 632, 650, 1796 |
| SmlI | CTYRAG | 2 cut(s) | 616, 859 |
| SmoI | CTYRAG | 2 cut(s) | 616, 859 |
| SphI | GCATGC | 1 cut(s) | 165 |
| SseBI | AGGCCT | 2 cut(s) | 581, 1482 |
| SsiI | CCGC | 3 cut(s) | 598, 622, 1243 |
| SspMI | CTAG | 4 cut(s) | 332, 377, 1184, 1833 |
| StuI | AGGCCT | 2 cut(s) | 581, 1482 |
| StyD4I | CCNGG | 6 cut(s) | 438, 487, 769, 1139, 1663, 1664 |
| TaaI | ACNGT | 6 cut(s) | 678, 683, 795, 910, 1810, 1824 |
| TaiI | ACGT | 2 cut(s) | 264, 1330 |
| TaqI | TCGA | 8 cut(s) | 673, 694, 827, 1093, 1195, 1514, 1563, 1630 |
| TaqII | GACCGA | 1 cut(s) | 730 |
| TauI | GCSGC | 1 cut(s) | 624 |
| TfiI | GAWTC | 5 cut(s) | 328, 548, 1197, 1622, 1669 |
| Tru1I | TTAA | 4 cut(s) | 194, 905, 1146, 1572 |
| Tru9I | TTAA | 4 cut(s) | 194, 905, 1146, 1572 |
| TscAI | CASTG | 2 cut(s) | 54, 688 |
| TseFI | GTSAC | 7 cut(s) | 719, 777, 787, 1578, 1646, 1760, 1836 |
| TseI | GCWGC | 2 cut(s) | 624, 1640 |
| Tsp45I | GTSAC | 7 cut(s) | 719, 777, 787, 1578, 1646, 1760, 1836 |
| TspDTI | ATGAA | 7 cut(s) | 24, 141, 335, 965, 1036, 1101, 1176 |
| TspGWI | ACGGA | 1 cut(s) | 1095 |
| TspMI | CCCGGG | 1 cut(s) | 1664 |
| TspRI | CASTG | 2 cut(s) | 54, 688 |
| VpaK11BI | GGWCC | 4 cut(s) | 603, 767, 1297, 1741 |
| XapI | RAATTY | 4 cut(s) | 13, 276, 1783, 1849 |
| XbaI | TCTAGA | 1 cut(s) | 331 |
| XceI | RCATGY | 3 cut(s) | 165, 649, 1021 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 886 |
| XmaI | CCCGGG | 1 cut(s) | 1664 |
| XmnI | GAANNNNTTC | 2 cut(s) | 393, 1626 |
| XspI | CTAG | 4 cut(s) | 332, 377, 1184, 1833 |