Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0009199

Physical Location & Seq

Genomic Coordinates Reverse (-)

47476483 .. 47478766

Gene Structure 2284 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0323500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGAAACGATAATGGTCATCACCCAAACCCCAATAATGACACGTAAATCGGACACTCGTCACCATGCATGGCCTCAACCCTCTTCTTATCTCCCACCTTGCTTATTATATATAGCATTTCCACGATCATCTTCTTCATCAAGAACTGAAAACATGGAGTTGAAAAGTAAGCTTTGTTTGGTTGTCTTGCTCTTCTCTGTTTTGCTTGCTGTGAGTGCTAGTCAGGACTATAAGGAGAGAGACCCTGAGCTGAAGCAGTGCAAGCACCAGTGCAAACACCAGAGAGGATATGATGAGCAAGAGAAGCAACTCTGCGAGCAGCGATGCGATGACTACATCAAGCAGAAGAGGCCGGACGAGAAGCAGCGAAGGAGAGAAGGAGAAGGAGGTACTAGTTTTTATAGATATGACGAGGATCAGTATCAGGGTCAGGGCCAACAACAACAGGACCAGAATCCCTACTTGTTTGAAGATCAGGATTTCGAGACCCAAATTGAAACAGATCAAGGCCGAGTTCAGATTCTTCAGAAGTTCACTGACAAGTCTGATCTGCTGCGCGGCATTGAGAATTTCCGGATTGGTTCCCTTGTCACCAAGCCTCACTCTTTTGTTGCTCCACACCATCATGATGCTGACTGTGTTCTCTTCGTCTTCCAGGGTCGACCAACCATTACTATGGTGAGAGGGGAGAAGAGAGAGAGCCATAACCTTGAACGTGGAGACATACTCAGGGTTCCCGCTGGTACACCTGTTTATATTATCAATAGGGACGATAATGAAAAGCTGTTTGTTGTGAAACTCCTCCACCCAGTCTCCCTTCCTGATCAGTTTGAGACATTTTATGAGGGAGGTGGTGAAAATCCAGAATCATTTTTCAAAGCTTTCAGTCCGGAGGTACTTCAAGCGGCTTTCAAGACTGAAAGAGATGAGCTGGAGAGGCTATTCGGGCAGCAGAGGCAAGGCAGCATCATGAAGGCCTCCAGAGAGCAAATTGAGAAGATGAGCCACAGTACTCGTGGCCGTGAAGGATTTTGGCCTTTCCATGGTGATGAACCATTTTCAACATCATCATCGAAATCAGGCCCATTCAATCTCTTCAAAAAGCGGCCTTCTCAGTCAAACCGACACGGACGTCTCTTTGAAGCCGATTCCAATGACTACAAACAGCTCGAGGAGCTCGACCTCCAAATCACTTTTGCTAACATTACTCGAGGGTCCATGACTGCTCCATCCTTCAACTCCAAAGCCACCAAGATTGCCTTTGTTTTGGATGGTGAGGGCTTCTTCGAGATGGCCTGCCCCCACCTTGCTTCCCAAGGAGGTTCCCAACACCAACAGCAACGTCAGCGGAGGAGCAGCAGCCCAAGCTACCAGAATGTAAGAGGGGACTTGAGACGCGGTACCGTTTTTATTGTGCCGGCTGGCCATCCGGTGACTGCCATTGCCTCGAGCAACAATAACCTACAAGTCATCTGCTTTGAGGTGAATGCGAAAGACAATGTGAGGTTCCCTCTGGCTGGAAAGAAGAATGTGGTGAGTCTGTTTGAGAGGGAGGCAAAGGAGTTGGCATTCGGTGTTCCGGTGAGAGAGGTGGACCGCATCTTTAACAAGCAAGACGGCGAGTTTTTCCTGGAGGGACCGAACAATCAGCAGCAGGGTCGTATGTGGTCAGTGGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Complex1_LYR

Protein Analysis

559

Amino Acids

64.17

Weight (kDa)

6.98

Isoelectric Point (pI)

53.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	196 - 308	5.6e-10	Cupin
Cupin_2	PF07883	200 - 260	3.8e-06	Cupin domain
Cupin_1	PF00190	363 - 527	4.4e-25	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G76065
fragaria_vesca	FvH4_2g37960 FvH4_2g37960 FvH4_2g37960 FvH4_2g37960 FvH4_2g37960
malus_domestica	MD08G1007600.v1.1 MD15G1006800.v1.1
prunus_persica	Prupe.1G359500_v2.0.a1 Prupe.1G359500_v2.0.a1
pyrus_communis	pycom08g00630 pycom15g00540
rosa_chinensis	RchiOBHm_Chr6g0303661
rosa_multiflora	Rmu_sc0013443.1_g000005 Rmu_ssc0000114.1_g000015
rosa_rugosa	Rorug06G0323500 Rorug06G0323600
rosa_samantha	Rh6AG437800 Rh6BG465300 Rh6CG449900 Rh6DG436700
rosa_wichuraiana	Rw6G037900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1131
AatII	GACGTC	1 cut(s)	1135
Acc65I	GGTACC	1 cut(s)	1400
AccB1I	GGYRCC	1 cut(s)	1400
AccI	GTMKAC	1 cut(s)	661
AccII	CGCG	2 cut(s)	558, 1398
AccIII	TCCGGA	2 cut(s)	573, 889
AciI	CCGC	7 cut(s)	558, 738, 905, 1105, 1348, 1398, 1597
AclWI	GGATC	1 cut(s)	423
AcoI	YGGCCR	2 cut(s)	1018, 1423
AcsI	RAATTY	1 cut(s)	568
AcuI	CTGAAG	2 cut(s)	272, 509
AcyI	GRCGYC	1 cut(s)	1132
AfaI	GTAC	5 cut(s)	391, 745, 897, 1012, 1402
AfiI	CCNNNNNNNGG	2 cut(s)	1043, 1517
AflIII	ACRYGT	1 cut(s)	41
AhlI	ACTAGT	1 cut(s)	392
AjnI	CCWGG	2 cut(s)	654, 1629
AluBI	AGCT	8 cut(s)	172, 250, 784, 881, 931, 1168, 1177, 1368
AluI	AGCT	8 cut(s)	172, 250, 784, 881, 931, 1168, 1177, 1368
Alw21I	GWGCWC	1 cut(s)	1179
Alw26I	GTCTC	7 cut(s)	234, 479, 714, 817, 827, 1139, 1387
AlwI	GGATC	1 cut(s)	423
Ama87I	CYCGRG	3 cut(s)	1169, 1209, 1447
Aor13HI	TCCGGA	2 cut(s)	573, 889
ApeKI	GCWGC	8 cut(s)	319, 364, 553, 949, 963, 1356, 1359, 1651
ApoI	RAATTY	1 cut(s)	568
Asp718I	GGTACC	1 cut(s)	1400
AspLEI	GCGC	1 cut(s)	558
AspS9I	GGNCC	6 cut(s)	433, 448, 1082, 1215, 1594, 1637
AvaI	CYCGRG	3 cut(s)	1169, 1209, 1447
AvaII	GGWCC	4 cut(s)	448, 1215, 1594, 1637
BaeI	ACNNNNGTAYC	2 cut(s)	735, 768
BalI	TGGCCA	1 cut(s)	1425
BanI	GGYRCC	1 cut(s)	1400
BanII	GRGCYC	1 cut(s)	1179
BauI	CACGAG	1 cut(s)	1014
BbsI	GAAGAC	1 cut(s)	643
Bbv12I	GWGCWC	1 cut(s)	1179
BbvI	GCAGC	8 cut(s)	331, 376, 540, 961, 975, 1368, 1371, 1663
BccI	CCATC	5 cut(s)	630, 1237, 1265, 1285, 1434
BceAI	ACGGC	2 cut(s)	1005, 1633
BcgI	CGANNNNNNTGC	2 cut(s)	1640, 1674
BciT130I	CCWGG	2 cut(s)	656, 1631
BclI	TGATCA	1 cut(s)	823
BcoDI	GTCTC	7 cut(s)	234, 479, 714, 817, 827, 1139, 1387
BcuI	ACTAGT	1 cut(s)	392
BfaI	CTAG	2 cut(s)	219, 393
BmcAI	AGTACT	1 cut(s)	1012
Bme1390I	CCNGG	2 cut(s)	656, 1631
Bme18I	GGWCC	4 cut(s)	448, 1215, 1594, 1637
BmeT110I	CYCGRG	3 cut(s)	1169, 1209, 1447
BmgT120I	GGNCC	6 cut(s)	433, 448, 1082, 1215, 1594, 1637
BmiI	GGNNCC	7 cut(s)	583, 735, 1216, 1324, 1402, 1508, 1638
BmrFI	CCNGG	2 cut(s)	656, 1631
BmrI	ACTGGG	1 cut(s)	803
BmsI	GCATC	4 cut(s)	314, 619, 975, 1608
BmuI	ACTGGG	1 cut(s)	803
BoxI	GACNNNNGTC	1 cut(s)	57
BpiI	GAAGAC	1 cut(s)	643
BplI	GAGNNNNNCTC	4 cut(s)	711, 743, 1495, 1527
BpmI	CTGGAG	3 cut(s)	953, 964, 1652
Bpu10I	CCTNAGC	1 cut(s)	246
BpuEI	CTTGAG	1 cut(s)	1411
BsaAI	YACGTR	1 cut(s)	44
BsaBI	GATNNNNATC	1 cut(s)	420
BsaHI	GRCGYC	1 cut(s)	1132
BsaI	GGTCTC	2 cut(s)	234, 479
BsaJI	CCNNGG	3 cut(s)	655, 1042, 1315
BsaWI	WCCGGW	4 cut(s)	573, 889, 1429, 1579
BsaXI	ACNNNNNCTCC	2 cut(s)	797, 827
Bsc4I	CCNNNNNNNGG	2 cut(s)	1043, 1517
Bse118I	RCCGGY	1 cut(s)	1417
Bse1I	ACTGG	2 cut(s)	268, 809
Bse3DI	GCAATG	1 cut(s)	1440
Bse8I	GATNNNNATC	1 cut(s)	420
BseAI	TCCGGA	2 cut(s)	573, 889
BseBI	CCWGG	2 cut(s)	656, 1631
BseDI	CCNNGG	3 cut(s)	655, 1042, 1315
BseGI	GGATG	3 cut(s)	1229, 1276, 1426
BseJI	GATNNNNATC	1 cut(s)	420
BseLI	CCNNNNNNNGG	2 cut(s)	1043, 1517
BseMI	GCAATG	1 cut(s)	1440
BseMII	CTCAG	3 cut(s)	237, 742, 1127
BseNI	ACTGG	2 cut(s)	268, 809
BseRI	GAGGAG	3 cut(s)	791, 1187, 1366
BseXI	GCAGC	8 cut(s)	331, 376, 540, 961, 975, 1368, 1371, 1663
Bsh1236I	CGCG	2 cut(s)	558, 1398
BshNI	GGYRCC	1 cut(s)	1400
BsiHKAI	GWGCWC	1 cut(s)	1179
BsiHKCI	CYCGRG	3 cut(s)	1169, 1209, 1447
BsiSI	CCGG	6 cut(s)	353, 574, 890, 1418, 1430, 1580
BslFI	GGGAC	3 cut(s)	782, 1400, 1650
BslI	CCNNNNNNNGG	2 cut(s)	1043, 1517
BsmAI	GTCTC	7 cut(s)	234, 479, 714, 817, 827, 1139, 1387
BsmBI	CGTCTC	2 cut(s)	1139, 1387
BsmFI	GGGAC	3 cut(s)	782, 1400, 1650
BsmI	GAATGC	2 cut(s)	1492, 1568
Bso31I	GGTCTC	2 cut(s)	234, 479
BsoBI	CYCGRG	3 cut(s)	1169, 1209, 1447
Bsp1286I	GDGCHC	1 cut(s)	1179
Bsp13I	TCCGGA	2 cut(s)	573, 889
Bsp143I	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
Bsp19I	CCATGG	1 cut(s)	1042
BspACI	CCGC	7 cut(s)	558, 738, 905, 1105, 1348, 1398, 1597
BspCNI	CTCAG	3 cut(s)	238, 741, 1126
BspEI	TCCGGA	2 cut(s)	573, 889
BspFNI	CGCG	2 cut(s)	558, 1398
BspHI	TCATGA	2 cut(s)	625, 969
BspLI	GGNNCC	7 cut(s)	583, 735, 1216, 1324, 1402, 1508, 1638
BspPI	GGATC	1 cut(s)	423
BspQI	GCTCTTC	1 cut(s)	197
BspT107I	GGYRCC	1 cut(s)	1400
BspTNI	GGTCTC	2 cut(s)	234, 479
BsrDI	GCAATG	1 cut(s)	1440
BsrFI	RCCGGY	1 cut(s)	1417
BsrI	ACTGG	2 cut(s)	268, 809
BssAI	RCCGGY	1 cut(s)	1417
BssECI	CCNNGG	3 cut(s)	655, 1042, 1315
BssMI	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
BssNI	GRCGYC	1 cut(s)	1132
BssSI	CACGAG	1 cut(s)	1014
BssT1I	CCWWGG	2 cut(s)	1042, 1315
Bst2BI	CACGAG	1 cut(s)	1014
Bst2UI	CCWGG	2 cut(s)	656, 1631
Bst4CI	ACNGT	3 cut(s)	638, 1010, 1405
Bst6I	CTCTTC	6 cut(s)	88, 197, 341, 650, 686, 1100
BstACI	GRCGYC	1 cut(s)	1132
BstBAI	YACGTR	1 cut(s)	44
BstC8I	GCNNGC	6 cut(s)	207, 263, 317, 1297, 1419, 1423
BstDEI	CTNAG	3 cut(s)	246, 728, 1113
BstDSI	CCRYGG	1 cut(s)	1042
BstF5I	GGATG	3 cut(s)	1229, 1276, 1426
BstFNI	CGCG	2 cut(s)	558, 1398
BstHHI	GCGC	1 cut(s)	558
BstKTI	GATC	6 cut(s)	128, 418, 475, 505, 550, 826
BstMAI	GTCTC	7 cut(s)	234, 479, 714, 817, 827, 1139, 1387
BstMBI	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
BstNI	CCWGG	2 cut(s)	656, 1631
BstPAI	GACNNNNGTC	1 cut(s)	57
BstSCI	CCNGG	2 cut(s)	654, 1629
BstUI	CGCG	2 cut(s)	558, 1398
BstV1I	GCAGC	8 cut(s)	331, 376, 540, 961, 975, 1368, 1371, 1663
BstV2I	GAAGAC	1 cut(s)	643
BstXI	CCANNNNNNTGG	1 cut(s)	676
BtgI	CCRYGG	1 cut(s)	1042
BtgZI	GCGATG	2 cut(s)	337, 342
BtsCI	GGATG	3 cut(s)	1229, 1276, 1426
BtsI	GCAGTG	1 cut(s)	263
BtsIMutI	CAGTG	4 cut(s)	263, 275, 534, 1677
Cac8I	GCNNGC	6 cut(s)	207, 263, 317, 1297, 1419, 1423
CciI	TCATGA	2 cut(s)	625, 969
CfoI	GCGC	1 cut(s)	558
Cfr10I	RCCGGY	1 cut(s)	1417
Cfr13I	GGNCC	6 cut(s)	433, 448, 1082, 1215, 1594, 1637
CseI	GACGC	1 cut(s)	1404
Csp6I	GTAC	5 cut(s)	390, 744, 896, 1011, 1401
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CviAII	CATG	7 cut(s)	65, 69, 154, 626, 970, 1043, 1219
CviQI	GTAC	5 cut(s)	390, 744, 896, 1011, 1401
DdeI	CTNAG	3 cut(s)	246, 728, 1113
DpnI	GATC	6 cut(s)	127, 417, 474, 504, 549, 825
DpnII	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
DrdI	GACNNNNNNGTC	1 cut(s)	1131
DseDI	GACNNNNNNGTC	1 cut(s)	1131
EaeI	YGGCCR	2 cut(s)	1018, 1423
Eam1104I	CTCTTC	6 cut(s)	88, 197, 341, 650, 686, 1100
EarI	CTCTTC	6 cut(s)	88, 197, 341, 650, 686, 1100
Ecl136II	GAGCTC	1 cut(s)	1177
Eco130I	CCWWGG	2 cut(s)	1042, 1315
Eco147I	AGGCCT	1 cut(s)	977
Eco24I	GRGCYC	1 cut(s)	1179
Eco31I	GGTCTC	2 cut(s)	234, 479
Eco47I	GGWCC	4 cut(s)	448, 1215, 1594, 1637
Eco53kI	GAGCTC	1 cut(s)	1177
Eco57I	CTGAAG	2 cut(s)	272, 509
Eco88I	CYCGRG	3 cut(s)	1169, 1209, 1447
EcoICRI	GAGCTC	1 cut(s)	1177
EcoRII	CCWGG	2 cut(s)	654, 1629
EcoT14I	CCWWGG	2 cut(s)	1042, 1315
EcoT22I	ATGCAT	1 cut(s)	70
EcoT38I	GRGCYC	1 cut(s)	1179
ErhI	CCWWGG	2 cut(s)	1042, 1315
Esp3I	CGTCTC	2 cut(s)	1139, 1387
FaeI	CATG	7 cut(s)	68, 72, 157, 629, 973, 1046, 1222
FalI	AAGNNNNNCTT	2 cut(s)	1244, 1276
FaqI	GGGAC	3 cut(s)	782, 1400, 1650
FatI	CATG	7 cut(s)	64, 68, 153, 625, 969, 1042, 1218
FauI	CCCGC	1 cut(s)	745
FbaI	TGATCA	1 cut(s)	823
FblI	GTMKAC	1 cut(s)	661
FokI	GGATG	3 cut(s)	1216, 1283, 1413
FriOI	GRGCYC	1 cut(s)	1179
FspBI	CTAG	2 cut(s)	219, 393
GlaI	GCGC	1 cut(s)	557
GsuI	CTGGAG	3 cut(s)	953, 964, 1652
HapII	CCGG	6 cut(s)	353, 574, 890, 1418, 1430, 1580
HgaI	GACGC	1 cut(s)	1404
HhaI	GCGC	1 cut(s)	558
Hin1I	GRCGYC	1 cut(s)	1132
Hin1II	CATG	7 cut(s)	68, 72, 157, 629, 973, 1046, 1222
Hin6I	GCGC	1 cut(s)	556
HinP1I	GCGC	1 cut(s)	556
HincII	GTYRAC	1 cut(s)	662
HindII	GTYRAC	1 cut(s)	662
HindIII	AAGCTT	2 cut(s)	170, 879
HinfI	GANTC	5 cut(s)	454, 520, 866, 1148, 1537
HpaII	CCGG	6 cut(s)	353, 574, 890, 1418, 1430, 1580
Hpy166II	GTNNAC	4 cut(s)	534, 662, 746, 1594
Hpy188I	TCNGA	4 cut(s)	52, 519, 528, 547
Hpy8I	GTNNAC	4 cut(s)	534, 662, 746, 1594
HpyAV	CCTTC	8 cut(s)	363, 371, 377, 827, 967, 1019, 1119, 1243
HpyCH4III	ACNGT	3 cut(s)	638, 1010, 1405
HpyCH4IV	ACGT	4 cut(s)	43, 715, 1132, 1342
HpyCH4V	TGCA	3 cut(s)	68, 261, 273
HpyF3I	CTNAG	3 cut(s)	246, 728, 1113
HpySE526I	ACGT	4 cut(s)	43, 715, 1132, 1342
Hsp92I	GRCGYC	1 cut(s)	1132
Hsp92II	CATG	7 cut(s)	68, 72, 157, 629, 973, 1046, 1222
HspAI	GCGC	1 cut(s)	556
Kpn2I	TCCGGA	2 cut(s)	573, 889
KpnI	GGTACC	1 cut(s)	1404
KroI	GCCGGC	1 cut(s)	1417
KroNI	GCCGGC	1 cut(s)	1419
Ksp22I	TGATCA	1 cut(s)	823
Kzo9I	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
LguI	GCTCTTC	1 cut(s)	197
LmnI	GCTCC	4 cut(s)	619, 1174, 1231, 1353
Lsp1109I	GCAGC	8 cut(s)	331, 376, 540, 961, 975, 1368, 1371, 1663
LweI	GCATC	4 cut(s)	314, 619, 975, 1608
MaeI	CTAG	2 cut(s)	219, 393
MaeII	ACGT	4 cut(s)	43, 715, 1132, 1342
MaeIII	GTNAC	3 cut(s)	59, 589, 1432
MalI	GATC	6 cut(s)	127, 417, 474, 504, 549, 825
MboI	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
MhlI	GDGCHC	1 cut(s)	1179
MlsI	TGGCCA	1 cut(s)	1425
MluCI	AATT	3 cut(s)	492, 568, 990
MluNI	TGGCCA	1 cut(s)	1425
MlyI	GAGTC	1 cut(s)	1546
Mox20I	TGGCCA	1 cut(s)	1425
Mph1103I	ATGCAT	1 cut(s)	70
MroI	TCCGGA	2 cut(s)	573, 889
MroNI	GCCGGC	1 cut(s)	1417
MscI	TGGCCA	1 cut(s)	1425
MseI	TTAA	1 cut(s)	1605
MslI	CAYNNNNRTG	4 cut(s)	624, 627, 674, 1047
Msp20I	TGGCCA	1 cut(s)	1425
MspA1I	CMGCKG	2 cut(s)	740, 1348
MspI	CCGG	6 cut(s)	353, 574, 890, 1418, 1430, 1580
MspR9I	CCNGG	2 cut(s)	656, 1631
Mva1269I	GAATGC	2 cut(s)	1492, 1568
MvaI	CCWGG	2 cut(s)	656, 1631
MvnI	CGCG	2 cut(s)	558, 1398
NaeI	GCCGGC	1 cut(s)	1419
NcoI	CCATGG	1 cut(s)	1042
NdeII	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
NgoMIV	GCCGGC	1 cut(s)	1417
NlaIII	CATG	7 cut(s)	68, 72, 157, 629, 973, 1046, 1222
NlaIV	GGNNCC	7 cut(s)	583, 735, 1216, 1324, 1402, 1508, 1638
NmeAIII	GCCGAG	1 cut(s)	536
NmuCI	GTSAC	3 cut(s)	59, 589, 1432
NsiI	ATGCAT	1 cut(s)	70
PaeR7I	CTCGAG	3 cut(s)	1169, 1209, 1447
PagI	TCATGA	2 cut(s)	625, 969
PceI	AGGCCT	1 cut(s)	977
PciSI	GCTCTTC	1 cut(s)	197
PcsI	WCGNNNNNNNCGW	1 cut(s)	1176
PctI	GAATGC	2 cut(s)	1492, 1568
PdiI	GCCGGC	1 cut(s)	1419
PfeI	GAWTC	4 cut(s)	454, 520, 866, 1148
PfoI	TCCNGGA	1 cut(s)	1629
PleI	GAGTC	1 cut(s)	1545
PpsI	GAGTC	1 cut(s)	1545
Ppu21I	YACGTR	1 cut(s)	44
PshAI	GACNNNNGTC	1 cut(s)	57
Psp124BI	GAGCTC	1 cut(s)	1179
Psp6I	CCWGG	2 cut(s)	654, 1629
PspGI	CCWGG	2 cut(s)	654, 1629
PspN4I	GGNNCC	7 cut(s)	583, 735, 1216, 1324, 1402, 1508, 1638
PspPI	GGNCC	6 cut(s)	433, 448, 1082, 1215, 1594, 1637
PspXI	VCTCGAGB	3 cut(s)	1169, 1209, 1447
RsaI	GTAC	5 cut(s)	391, 745, 897, 1012, 1402
RsaNI	GTAC	5 cut(s)	390, 744, 896, 1011, 1401
RseI	CAYNNNNRTG	4 cut(s)	624, 627, 674, 1047
SacI	GAGCTC	1 cut(s)	1179
SalI	GTCGAC	1 cut(s)	660
SapI	GCTCTTC	1 cut(s)	197
SaqAI	TTAA	1 cut(s)	1605
Sau3AI	GATC	6 cut(s)	125, 415, 472, 502, 547, 823
Sau96I	GGNCC	6 cut(s)	433, 448, 1082, 1215, 1594, 1637
ScaI	AGTACT	1 cut(s)	1012
SchI	GAGTC	1 cut(s)	1546
ScrFI	CCNGG	2 cut(s)	656, 1631
SduI	GDGCHC	1 cut(s)	1179
SfaNI	GCATC	4 cut(s)	314, 619, 975, 1608
Sfr274I	CTCGAG	3 cut(s)	1169, 1209, 1447
SinI	GGWCC	4 cut(s)	448, 1215, 1594, 1637
SlaI	CTCGAG	3 cut(s)	1169, 1209, 1447
SmiMI	CAYNNNNRTG	4 cut(s)	624, 627, 674, 1047
SmlI	CTYRAG	4 cut(s)	1169, 1209, 1390, 1447
SmoI	CTYRAG	4 cut(s)	1169, 1209, 1390, 1447
SpeI	ACTAGT	1 cut(s)	392
Sse9I	AATT	3 cut(s)	492, 568, 990
SseBI	AGGCCT	1 cut(s)	977
SsiI	CCGC	7 cut(s)	558, 738, 905, 1105, 1348, 1398, 1597
SspMI	CTAG	2 cut(s)	219, 393
SstI	GAGCTC	1 cut(s)	1179
StuI	AGGCCT	1 cut(s)	977
StyD4I	CCNGG	2 cut(s)	654, 1629
StyI	CCWWGG	2 cut(s)	1042, 1315
TaaI	ACNGT	3 cut(s)	638, 1010, 1405
TaiI	ACGT	4 cut(s)	46, 718, 1135, 1345
TaqI	TCGA	8 cut(s)	483, 661, 1073, 1170, 1179, 1210, 1287, 1448
TaqII	GACCGA	1 cut(s)	1654
TasI	AATT	3 cut(s)	492, 568, 990
TatI	WGTACW	1 cut(s)	1010
TauI	GCSGC	3 cut(s)	561, 908, 1108
TfiI	GAWTC	4 cut(s)	454, 520, 866, 1148
Tru1I	TTAA	1 cut(s)	1605
Tru9I	TTAA	1 cut(s)	1605
TscAI	CASTG	4 cut(s)	263, 275, 541, 1677
TseFI	GTSAC	3 cut(s)	59, 589, 1432
TseI	GCWGC	8 cut(s)	319, 364, 553, 949, 963, 1356, 1359, 1651
Tsp45I	GTSAC	3 cut(s)	59, 589, 1432
TspDTI	ATGAA	4 cut(s)	126, 792, 986, 1065
TspGWI	ACGGA	1 cut(s)	1143
TspRI	CASTG	4 cut(s)	263, 275, 541, 1677
VpaK11BI	GGWCC	4 cut(s)	448, 1215, 1594, 1637
XapI	RAATTY	1 cut(s)	568
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1013
XhoI	CTCGAG	3 cut(s)	1169, 1209, 1447
XmiI	GTMKAC	1 cut(s)	661
XspI	CTAG	2 cut(s)	219, 393
ZraI	GACGTC	1 cut(s)	1133
ZrmI	AGTACT	1 cut(s)	1012
Zsp2I	ATGCAT	1 cut(s)	70

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.