Rorug06G0350100

Protein of unknown function (DUF1677)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
49947265 .. 49952090
4826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0350100.1

Sequence Viewer

Length: 4401 bp
ATGGACTCCTCCAAGCTCCCCGCTCCACAACTCCCTCTGCACTCATCAGGTTCTTCTTCTTCTTCCTCCGCTTCTTCTGTTTCCTCTGCTTCTTCCGACTCTGAAATTGATGTTAATTTAGCCAAAACCACTGTTTTGAAAATCGATGATGACGAAACTAATTCCGGTGGTGTTGGTGTTGGTGTTGGTGTTGGGCCAGGTCTGGGTAGTGACGGTGAGGAGGGGTTCGATCCTGGTTTGGATAGGGCGTTTGTCAGAGACGAACAACAAACCCTAGCTCCGGCGGAAGGGGAAGTAGTAGGTAGTAGCAGCAAGGCTGTCAAATTTGTTAGTTCTTCCGAGTTTTTTCTGAGGCCGATTGCCAAGGTCTCCGTGGATGATGATGACGGCGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGATTCGAAAGCCGGTGTGCAAGTGTTTAAGGAGTCTGTTGGGGTGGGTGAGAGTTCTGAGGTGGAGAAGGGTTTCAATTCCGGTGAGTTGGTGAAAGAGAATGGTGTTGGTGGTGAAGTAGGGAAGTCGAAGGTTGCGGAGGGTTTAGGCTCTGTTTCTGTGGCTGAGATAGAGGATAAGAAGGTTGTAGAGCCTAAGGAGAGCGAGGTTGTTAATGGTACCGCAGAAGCTGTGAGGCAGAGTAGTGAGAATGGCTTGGTTGAAGAACACGCTGTGCATGTTGATTTGTCACACACAGGAGCAGCTGTTGTTGGCGATGTGGAGAAGATTGAGGAGTCTGAGATAAAGGGGTTGGAGGTTCCGGTAGGGGTGAGCTTGGATAATGAGTTTGGTCAAATTAGCCGTGAGGTTGAACAGCCGAAAGATTCAGAGTTGGTTGCTGTGGAGTCTAAGTCTGACGGAGTGGTTGTTGCTGAACCAGCAGTTGATAAGTTGGTTGAAGAACATGGTGTTGATATCACTAGTGAAGGTGACTCAGTTGTGGAAGCTGTCCGTGTTGATTTGTCACACACAGGAGCAGCTGTTGTTGGTGATGTGGAGAAGATTGAGGAATCTGCAATTAAAGGGTTGGAGGTTCCAGCAGGAGTAAGCTTGGAGAATGGATTTGATCAAATTGGCCGTGATTCTGAATTGCCAAATGATTCAAAGTTGGTGGAGTCTGAAAAAGCGGCTGTTGCTGATCCAGCAGATGATAAGTTGGTTGAAGAACATGGTATGGATTTTACTAGCAAGGGCGATTCAGTTGTGCAAGCTGTCGATGTTGATTTGTCACAGACAGGAGCAGATGTTGTTGGTGATGTGGAGAAGATTGAGGAATCTGAAATTAAAGTTCCAATAGGCACGAGCTTGGAGAATGGATTTGATCAAATTAGCCGTGATGTTGAATTGCAGTCCGAGTCTGACAAAGTGGTTGTTGCTGAGTCGGGGAATGTGGAGCAGAAAACTGTTGTTGCTGCTGCTGAGGAAGTAGATTTCCAGGAGAGAGAGGAGAAAGAACTTGAACTGAAGTCCAATGCTGCAACTGGACAGGAAGGGCCCACAATGGAGATAGGTGCTGCTGAAGTAAAAGTAGTGCCAGATGAAACCCAGTCTGTGAACCATGTTTCTGATTTTAGTGTACTGAATGCACCCGAGAGTGCTGAAAAGAGTGCAACTGACCAAGAAATAAAATTAGAGGAGGAAGAGGAGAAGCACTCTCTTGATGAAAGTGGCATTGAATCTTTAGAACCGAGTTCCATTTCACATCAAGAGATAAGGGTTGAAGCTGAAGATGATGACGAAGATGATGACGATAAGGACGATGAAGGGGAAAATGATGGTATGATATTTGGGAGCTCTGCAGCTGCCAAACAATTCTTGGAAGAGTTGGAACGGGAATCAGGTACTGGTTCTTACTCAGGTGCAGAGAGTTATGGTGACCGTTCTCTGAGTTATCGTGATGATTCTCAGAGAGTTGATGGGCAGATTGTGACAGACTCAGATGAAGAAGTGGACACTGATGAAGAAGGGGGTGGAAAAGAGTTATTTGATTCTGCTGCATTGGCAGCTCTTCTGAAAGCAGCAACAGGTGGCGCTGCGTCGGATGGTGGCAGTGTCACATTTACCTCCCCAGATGGATCCAGGCTTTTCTCTGTCGAGCGTCCTGCTGGTTTGGGATCCTCAATGCGGCCTATGAAACCTGGTACAAGACCAAACCCTTCTACTCTATTTTCCAATGCTACAGTTGGGGGAGATACTGACAACAGCTTGAGTGAAGAAGAGAAAAAGAAACTGGAAAAATTTCAGCAGATAAGGGTTAAGTTCTTAAGGCTTGTTCAGAGATTAGGTGTATCTACAGAAGATTCAATAGCCAAGCAGGTTCTATACCGCCTAGCTCTTGTTTCAGGAAGGCAAAATAGTCGTGAGTTTAGCCTTGAAGCTGCAAAGACAACAGCTCTTGAGCTTGAAGCAGATGGGAAAGACGATCTTGACTTTTCCTTGAACATACTGGTTCTTGGGAAAACAGGTGTGGGGAAGAGTGCTACTATTAATTCTATTTTTGGTGAAGAAAAGACTCCAATTTATGCCTTTGGACCAGCAACAACCACTGTGAAAGAAATTGTTGGAGTGGTGGATGGAATCAAGATTAGGGTTTTTGATACACCAGGTCTTAAATCTGCTGCAATGGAACAAAATGTAAACCGCAAAATTTTATCTTCTGTGCAGAAGTTCACGAAAAAATGCCCCCCAGATATTGTCCTCTATGTGGATCGGTTGGACACCCAAAGTAGGGATCTAAATGATGTGCCAGTATTAAGATCAATTACTAGTGCTTTTGGCCCTTCAATTTGGCGAAGTACTATAGTCACTCTAACCCATGCTGCTTCTGCTCCTCCTGATGGACCGTCAGGCTCTCCTCTGAATTATGAGTTGTTTGTTGCTCAGAGGTCACAGATCCTCCAGCAGACCATTGGACAAGCTATTGGGGATATAAGGTTTACAAATCCAAATATGATGAGTCCTATATCTCTTGTAGAGAACCATCCCTCCTGTCGAAAGAATAGAGAAGGTGAGAAAGTGCTCCCTAATGGTCAAAGCTGGAGACCTCAGCTATTGCTCTTGAGCTCTTCTATGAAGGTCTTAGCTGAGGCAACTAATCTCTCAAAGCCTGCAGAACCATTTGATCACCGAAAACTATTTGGTTTCCGCACCCGTTCAGCTCCTCTTCCATACTTGTTGTCTTGGCTGCTGCAGTCTCGTACCCATCCAAAGCTCTCTGGTGATCAAGGTGGTGAGAATGCGGACTCAGATATCGACTTGGCTGACTTGTCCGATTCTGATAATGAGGAAGAGGAGGATGAGTATGATCAGCTTCCATCATTCAAGCCTCTCAAGAAATCTCAGATTGCTAAGCTTAGCAAAGAGCAGAAGAAGGCGTACCTTGAGGAGTACGATTACAGGGTTAAGCTCCTCCAGAAGAAGATGTGGAGAGAAGAGTTGAAAAGGATGAAAGAAATGAAGAAGGGTAATAAGGCTAGTGCAGACGAGTATGGTTATCTGGGTGAAGAAGATCCGGAAAATGCTGGCCCAGCAGCTGTGCCAGTTGCATTACCTGATATGGTTCTGCCACCTTCTTTTGATAGTGAAAATCCAGCTTACAGGTACCGCTTCTTGGAGCCAACTTCTCAGTTCTTGGCTAGGCCAGTATTGGATGCCCAAGGTTGGGACCATGACTGTGGGTATGATGGTGTCAATCTTGAATACAGTCAAGCCATTGTTAATACTTTTCCAGCTAGTGTTGCTGTTCAATTTACAAAGGACAAGAAGGAGTTTAATCTCCATTTGGATTCTTCAGTTGCTGCTAAGCATGGGGAGAATGGATCAAGTATGGCAGGTTTTGACATTCAAAACATTGGAAAGCAACTTGCTTACATTGTCAGAGGAGAAACCAAATGGAAAAATTTGAAGAAGAACAAGACTACTGCTGGAGTATCCATGACATTTTTAGGTGAAAATGTATCCACTGGAGTCAAAATTGAGGATCAGATTGCTGTTGGCAAGCGCCTGGTATTTGTGGGTAGTGCTGGAACTGTCAGATCTCAGGGTGACTCGGCATATGGAGCCAATGTAGAGGTGCGGTTGAGGGAAGCAGATTTTCCAATTGGCCAGGATCAATCATCATTGGGTCTGTCTCTGGTGAAGTGGAGGGGTGACTTGGCCCTGGGGGCAAATCTTCAGTCCCAGTTTTCCCTTGGACGAGACTACAAGATAGCTGTTCGTGCAGGATTGAACAACAAGCGCAGCGGACAGATCTCGATTAGAACAAGCAGCTCTGAACAACTTCAAATTGCACTTGTGGCTGTCATTCCAATCGTAAGATCCATCTACAATCTTATCTTCCCTGGAGCTTCACTCAGTGAGAATTACTCAATCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1466

Amino Acids

157.85

Weight (kDa)

4.52

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AIG1 PF04548 821 - 968 4.1e-21 AIG1 family
MMR_HSR1 PF01926 823 - 911 3e-09 50S ribosome-binding GTPase
TOC159_MAD PF11886 1187 - 1451 8.3e-128 Translocase of chloroplast 159/132, membrane anchor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0015896)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G25840
fragaria_vesca FvH4_2g35390
malus_domestica MD08G1112600.v1.1 MD15G1091900.v1.1
prunus_persica Prupe.1G446800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0306521
rosa_laevigata RLG00000010790
rosa_multiflora Rmu_sc0002971.1_g000007
rosa_roxburghii Rroxscaffold_7G00161700
rosa_rugosa Rorug06G0350100
rosa_samantha Rh6AG462200 Rh6BG438500 Rh6CG476500 Rh6DG463200
rosa_wichuraiana Rw6G040290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2329, 3845
Acc65I GGTACC 2 cut(s) 641, 3624
AccB1I GGYRCC 2 cut(s) 641, 3624
AccBSI CCGCTC 1 cut(s) 23
AccIII TCCGGA 1 cut(s) 3535
AcoI YGGCCR 2 cut(s) 1099, 4126
AcsI RAATTY 4 cut(s) 323, 2261, 2670, 3922
AcuI CTGAAG 5 cut(s) 1508, 1563, 1770, 3798, 4181
AdeI CACNNNGTG 2 cut(s) 697, 4379
AfaI GTAC 9 cut(s) 643, 1602, 1867, 2167, 2821, 3223, 3401, 3413, 3626
AflII CTTAAG 1 cut(s) 2287
AhlI ACTAGT 2 cut(s) 944, 2789
AloI GAACNNNNNNTCC 2 cut(s) 2993, 3025
Alw21I GWGCWC 3 cut(s) 1820, 3045, 3089
Alw26I GTCTC 6 cut(s) 252, 373, 3058, 3222, 4158, 4215
AlwNI CAGNNNCTG 4 cut(s) 653, 1868, 3557, 3821
Ama87I CYCGRG 1 cut(s) 1613
Aor13HI TCCGGA 1 cut(s) 3535
ApaI GGGCCC 1 cut(s) 1521
ApoI RAATTY 4 cut(s) 323, 2261, 2670, 3922
ArsI GACNNNNNNTTYG 2 cut(s) 4184, 4216
AseI ATTAAT 1 cut(s) 2511
Asp700I GAANNNNTTC 3 cut(s) 494, 2262, 4302
Asp718I GGTACC 2 cut(s) 641, 3624
AspLEI GCGC 3 cut(s) 2057, 4026, 4263
AspS9I GGNCC 9 cut(s) 194, 1517, 1518, 2555, 2801, 2864, 3548, 3688, 4180
AsuII TTCGAA 1 cut(s) 428
AvaI CYCGRG 1 cut(s) 1613
AvaII GGWCC 3 cut(s) 2555, 2864, 3688
AxyI CCTNAGG 1 cut(s) 618
BaeGI GKGCMC 1 cut(s) 1521
BalI TGGCCA 1 cut(s) 4128
BamHI GGATCC 2 cut(s) 2099, 2138
BanI GGYRCC 2 cut(s) 641, 3624
BanII GRGCYC 3 cut(s) 1521, 1820, 3089
BarI GAAGNNNNNNTAC 2 cut(s) 3383, 3415
BauI CACGAG 1 cut(s) 1324
Bbv12I GWGCWC 3 cut(s) 1820, 3045, 3089
BbvCI CCTCAGC 3 cut(s) 1443, 3069, 3108
BceAI ACGGC 4 cut(s) 403, 810, 1086, 1341
BcgI CGANNNNNNTGC 4 cut(s) 2108, 2142, 2363, 2397
BciVI GTATCC 2 cut(s) 3964, 3991
BclI TGATCA 5 cut(s) 1090, 1345, 3145, 3244, 3328
BcoDI GTCTC 6 cut(s) 252, 373, 3058, 3222, 4158, 4215
BcuI ACTAGT 2 cut(s) 944, 2789
BfaI CTAG 9 cut(s) 275, 945, 1209, 2354, 2790, 3498, 3660, 3756, 4399
BfmI CTRYAG 6 cut(s) 1821, 2202, 2316, 2823, 3132, 3212
BfoI RGCGCY 2 cut(s) 2058, 4027
BfrI CTTAAG 1 cut(s) 2287
BfuAI ACCTGC 2 cut(s) 2329, 3845
BfuI GTATCC 2 cut(s) 3964, 3991
BglI GCCNNNNNGGC 1 cut(s) 4187
BglII AGATCT 2 cut(s) 4058, 4272
BlpI GCTNAGC 3 cut(s) 3372, 3377, 3825
BmcAI AGTACT 1 cut(s) 2821
Bme18I GGWCC 3 cut(s) 2555, 2864, 3688
BmeT110I CYCGRG 1 cut(s) 1613
BmgT120I GGNCC 9 cut(s) 194, 1517, 1518, 2555, 2801, 2864, 3548, 3688, 4180
BmrI ACTGGG 2 cut(s) 1564, 4198
BmsI GCATC 1 cut(s) 3664
BmuI ACTGGG 2 cut(s) 1564, 4198
BplI GAGNNNNNCTC 5 cut(s) 1661, 1693, 4359, 4391, 4373
BpmI CTGGAG 6 cut(s) 2906, 3082, 3419, 3969, 4008, 4386
Bpu10I CCTNAGC 3 cut(s) 1443, 3069, 3108
Bpu1102I GCTNAGC 3 cut(s) 3372, 3377, 3825
Bpu14I TTCGAA 1 cut(s) 428
BpuEI CTTGAG 5 cut(s) 2251, 2441, 3103, 3338, 3425
Bsa29I ATCGAT 1 cut(s) 144
BsaI GGTCTC 2 cut(s) 373, 3058
BsaJI CCNNGG 7 cut(s) 363, 372, 3679, 4182, 4183, 4213, 4363
BsaWI WCCGGW 4 cut(s) 164, 503, 784, 3535
Bse118I RCCGGY 1 cut(s) 434
Bse21I CCTNAGG 1 cut(s) 618
Bse3DI GCAATG 1 cut(s) 2652
BseAI TCCGGA 1 cut(s) 3535
BseCI ATCGAT 1 cut(s) 144
BseDI CCNNGG 7 cut(s) 363, 372, 3679, 4182, 4183, 4213, 4363
BseGI GGATG 8 cut(s) 382, 2071, 2602, 3004, 3226, 3325, 3474, 3679
BseMI GCAATG 1 cut(s) 2652
BseSI GKGCMC 1 cut(s) 1521
BseYI CCCAGC 1 cut(s) 3550
BsgI GTGCAG 5 cut(s) 23, 1905, 2705, 3522, 4263
BshNI GGYRCC 2 cut(s) 641, 3624
BshVI ATCGAT 1 cut(s) 144
BsiHKAI GWGCWC 3 cut(s) 1820, 3045, 3089
BsiHKCI CYCGRG 1 cut(s) 1613
BsiSI CCGG 6 cut(s) 165, 281, 435, 504, 785, 3536
BslFI GGGAC 2 cut(s) 3701, 4186
BsmAI GTCTC 6 cut(s) 252, 373, 3058, 3222, 4158, 4215
BsmBI CGTCTC 1 cut(s) 252
BsmFI GGGAC 2 cut(s) 3701, 4186
BsmI GAATGC 2 cut(s) 1612, 3265
Bso31I GGTCTC 2 cut(s) 373, 3058
BsoBI CYCGRG 1 cut(s) 1613
Bsp119I TTCGAA 1 cut(s) 428
Bsp120I GGGCCC 1 cut(s) 1517
Bsp1286I GDGCHC 4 cut(s) 1521, 1820, 3045, 3089
Bsp13I TCCGGA 1 cut(s) 3535
Bsp1720I GCTNAGC 3 cut(s) 3372, 3377, 3825
BspDI ATCGAT 1 cut(s) 144
BspEI TCCGGA 1 cut(s) 3535
BspMAI CTGCAG 3 cut(s) 1825, 3136, 3216
BspMI ACCTGC 2 cut(s) 2329, 3845
BspQI GCTCTTC 2 cut(s) 2037, 3094
BspT104I TTCGAA 1 cut(s) 428
BspT107I GGYRCC 2 cut(s) 641, 3624
BspTI CTTAAG 1 cut(s) 2287
BspTNI GGTCTC 2 cut(s) 373, 3058
BsrBI CCGCTC 1 cut(s) 23
BsrDI GCAATG 1 cut(s) 2652
BsrFI RCCGGY 1 cut(s) 434
BssAI RCCGGY 1 cut(s) 434
BssECI CCNNGG 7 cut(s) 363, 372, 3679, 4182, 4183, 4213, 4363
BssSI CACGAG 1 cut(s) 1324
BssT1I CCWWGG 3 cut(s) 363, 3679, 4213
Bst2BI CACGAG 1 cut(s) 1324
BstAFI CTTAAG 1 cut(s) 2287
BstBI TTCGAA 1 cut(s) 428
BstC8I GCNNGC 4 cut(s) 1233, 3132, 3547, 4022
BstDSI CCRYGG 1 cut(s) 372
BstEII GGTNACC 1 cut(s) 1898
BstF5I GGATG 8 cut(s) 382, 2071, 2602, 3004, 3226, 3325, 3474, 3679
BstH2I RGCGCY 2 cut(s) 2058, 4027
BstHHI GCGC 3 cut(s) 2057, 4026, 4263
BstMAI GTCTC 6 cut(s) 252, 373, 3058, 3222, 4158, 4215
BstNSI RCATGY 1 cut(s) 704
BstPI GGTNACC 1 cut(s) 1898
BstSFI CTRYAG 6 cut(s) 1821, 2202, 2316, 2823, 3132, 3212
BstSLI GKGCMC 1 cut(s) 1521
BstX2I RGATCY 8 cut(s) 2099, 2138, 2755, 2916, 3532, 4058, 4272, 4340
BstXI CCANNNNNNTGG 1 cut(s) 3698
BstYI RGATCY 8 cut(s) 2099, 2138, 2755, 2916, 3532, 4058, 4272, 4340
Bsu15I ATCGAT 1 cut(s) 144
Bsu36I CCTNAGG 1 cut(s) 618
BsuI GTATCC 2 cut(s) 3964, 3991
BsuTUI ATCGAT 1 cut(s) 144
BtgI CCRYGG 1 cut(s) 372
BtgZI GCGATG 1 cut(s) 753
BtsCI GGATG 8 cut(s) 382, 2071, 2602, 3004, 3226, 3325, 3474, 3679
BtsI GCAGTG 1 cut(s) 2080
BtsIMutI CAGTG 6 cut(s) 129, 1977, 2080, 2568, 3984, 4384
BveI ACCTGC 2 cut(s) 2329, 3845
Cac8I GCNNGC 4 cut(s) 1233, 3132, 3547, 4022
CaiI CAGNNNCTG 4 cut(s) 653, 1868, 3557, 3821
CfoI GCGC 3 cut(s) 2057, 4026, 4263
Cfr10I RCCGGY 1 cut(s) 434
Cfr13I GGNCC 9 cut(s) 194, 1517, 1518, 2555, 2801, 2864, 3548, 3688, 4180
ClaI ATCGAT 1 cut(s) 144
CseI GACGC 2 cut(s) 2049, 2111
CsiI ACCWGGT 2 cut(s) 2161, 2626
Csp6I GTAC 9 cut(s) 642, 1601, 1866, 2166, 2820, 3222, 3400, 3412, 3625
CspCI CAANNNNNGTGG 2 cut(s) 1116, 1151
CviAII CATG 8 cut(s) 701, 929, 1193, 1583, 2840, 3692, 3830, 3958
CviQI GTAC 9 cut(s) 642, 1601, 1866, 2166, 2820, 3222, 3400, 3412, 3625
DraIII CACNNNGTG 2 cut(s) 697, 4379
EaeI YGGCCR 2 cut(s) 1099, 4126
EciI GGCGGA 1 cut(s) 299
Ecl136II GAGCTC 2 cut(s) 1818, 3087
Eco130I CCWWGG 3 cut(s) 363, 3679, 4213
Eco24I GRGCYC 3 cut(s) 1521, 1820, 3089
Eco31I GGTCTC 2 cut(s) 373, 3058
Eco32I GATATC 2 cut(s) 940, 3274
Eco47I GGWCC 3 cut(s) 2555, 2864, 3688
Eco53kI GAGCTC 2 cut(s) 1818, 3087
Eco57I CTGAAG 5 cut(s) 1508, 1563, 1770, 3798, 4181
Eco81I CCTNAGG 1 cut(s) 618
Eco88I CYCGRG 1 cut(s) 1613
Eco91I GGTNACC 1 cut(s) 1898
EcoICRI GAGCTC 2 cut(s) 1818, 3087
EcoO109I RGGNCCY 1 cut(s) 1517
EcoO65I GGTNACC 1 cut(s) 1898
EcoRV GATATC 2 cut(s) 940, 3274
EcoT14I CCWWGG 3 cut(s) 363, 3679, 4213
EcoT38I GRGCYC 3 cut(s) 1521, 1820, 3089
ErhI CCWWGG 3 cut(s) 363, 3679, 4213
Esp3I CGTCTC 1 cut(s) 252
FaeI CATG 8 cut(s) 704, 932, 1196, 1586, 2843, 3695, 3833, 3961
FalI AAGNNNNNCTT 2 cut(s) 2433, 2465
FaqI GGGAC 2 cut(s) 3701, 4186
FatI CATG 8 cut(s) 700, 928, 1192, 1582, 2839, 3691, 3829, 3957
FauI CCCGC 1 cut(s) 28
FauNDI CATATG 1 cut(s) 4078
FbaI TGATCA 5 cut(s) 1090, 1345, 3145, 3244, 3328
FokI GGATG 8 cut(s) 389, 2078, 2609, 2991, 3213, 3332, 3481, 3686
FriOI GRGCYC 3 cut(s) 1521, 1820, 3089
FspBI CTAG 9 cut(s) 275, 945, 1209, 2354, 2790, 3498, 3660, 3756, 4399
GlaI GCGC 3 cut(s) 2056, 4025, 4262
GsaI CCCAGC 1 cut(s) 3554
GsuI CTGGAG 6 cut(s) 2906, 3082, 3419, 3969, 4008, 4386
HaeII RGCGCY 2 cut(s) 2058, 4027
HapII CCGG 6 cut(s) 165, 281, 435, 504, 785, 3536
HgaI GACGC 2 cut(s) 2049, 2111
HhaI GCGC 3 cut(s) 2057, 4026, 4263
Hin1II CATG 8 cut(s) 704, 932, 1196, 1586, 2843, 3695, 3833, 3961
Hin6I GCGC 3 cut(s) 2055, 4024, 4261
HinP1I GCGC 3 cut(s) 2055, 4024, 4261
HindIII AAGCTT 2 cut(s) 1072, 3374
HpaII CCGG 6 cut(s) 165, 281, 435, 504, 785, 3536
Hpy166II GTNNAC 6 cut(s) 1579, 1601, 1975, 2662, 2694, 2961
Hpy8I GTNNAC 6 cut(s) 1579, 1601, 1975, 2662, 2694, 2961
Hpy99I CGWCG 1 cut(s) 2065
Hsp92II CATG 8 cut(s) 704, 932, 1196, 1586, 2843, 3695, 3833, 3961
HspAI GCGC 3 cut(s) 2055, 4024, 4261
Kpn2I TCCGGA 1 cut(s) 3535
KpnI GGTACC 2 cut(s) 645, 3628
Ksp22I TGATCA 5 cut(s) 1090, 1345, 3145, 3244, 3328
LguI GCTCTTC 2 cut(s) 2037, 3094
LweI GCATC 1 cut(s) 3664
MabI ACCWGGT 2 cut(s) 2161, 2626
MaeI CTAG 9 cut(s) 275, 945, 1209, 2354, 2790, 3498, 3660, 3756, 4399
MbiI CCGCTC 1 cut(s) 23
MfeI CAATTG 1 cut(s) 4122
MflI RGATCY 8 cut(s) 2099, 2138, 2755, 2916, 3532, 4058, 4272, 4340
MhlI GDGCHC 4 cut(s) 1521, 1820, 3045, 3089
MlsI TGGCCA 1 cut(s) 4128
MluNI TGGCCA 1 cut(s) 4128
MmeI TCCRAC 7 cut(s) 120, 756, 1032, 1830, 2043, 2566, 2718
Mox20I TGGCCA 1 cut(s) 4128
MroI TCCGGA 1 cut(s) 3535
MroXI GAANNNNTTC 3 cut(s) 494, 2262, 4302
MscI TGGCCA 1 cut(s) 4128
MslI CAYNNNNRTG 1 cut(s) 3696
Msp20I TGGCCA 1 cut(s) 4128
MspA1I CMGCKG 5 cut(s) 728, 1004, 1826, 3557, 4266
MspCI CTTAAG 1 cut(s) 2287
MspI CCGG 6 cut(s) 165, 281, 435, 504, 785, 3536
MunI CAATTG 1 cut(s) 4122
Mva1269I GAATGC 2 cut(s) 1612, 3265
NdeI CATATG 1 cut(s) 4078
NlaIII CATG 8 cut(s) 704, 932, 1196, 1586, 2843, 3695, 3833, 3961
NmeAIII GCCGAG 1 cut(s) 4052
NspI RCATGY 1 cut(s) 704
NspV TTCGAA 1 cut(s) 428
PasI CCCWGGG 1 cut(s) 4183
PciSI GCTCTTC 2 cut(s) 2037, 3094
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 1779
PctI GAATGC 2 cut(s) 1612, 3265
PdmI GAANNNNTTC 3 cut(s) 494, 2262, 4302
PfoI TCCNGGA 1 cut(s) 1458
PshBI ATTAAT 1 cut(s) 2511
Psp124BI GAGCTC 2 cut(s) 1820, 3089
PspEI GGTNACC 1 cut(s) 1898
PspFI CCCAGC 1 cut(s) 3550
PspOMI GGGCCC 1 cut(s) 1517
PspPI GGNCC 9 cut(s) 194, 1517, 1518, 2555, 2801, 2864, 3548, 3688, 4180
PstI CTGCAG 3 cut(s) 1825, 3136, 3216
PstNI CAGNNNCTG 4 cut(s) 653, 1868, 3557, 3821
PsuI RGATCY 8 cut(s) 2099, 2138, 2755, 2916, 3532, 4058, 4272, 4340
PvuII CAGCTG 4 cut(s) 728, 1004, 1826, 3557
RsaI GTAC 9 cut(s) 643, 1602, 1867, 2167, 2821, 3223, 3401, 3413, 3626
RsaNI GTAC 9 cut(s) 642, 1601, 1866, 2166, 2820, 3222, 3400, 3412, 3625
RseI CAYNNNNRTG 1 cut(s) 3696
SacI GAGCTC 2 cut(s) 1820, 3089
SapI GCTCTTC 2 cut(s) 2037, 3094
Sau96I GGNCC 9 cut(s) 194, 1517, 1518, 2555, 2801, 2864, 3548, 3688, 4180
ScaI AGTACT 1 cut(s) 2821
SduI GDGCHC 4 cut(s) 1521, 1820, 3045, 3089
SexAI ACCWGGT 2 cut(s) 2161, 2626
SfaNI GCATC 1 cut(s) 3664
SfcI CTRYAG 6 cut(s) 1821, 2202, 2316, 2823, 3132, 3212
SfuI TTCGAA 1 cut(s) 428
SinI GGWCC 3 cut(s) 2555, 2864, 3688
SmiMI CAYNNNNRTG 1 cut(s) 3696
SmlI CTYRAG 6 cut(s) 2230, 2287, 2420, 3082, 3353, 3404
SmoI CTYRAG 6 cut(s) 2230, 2287, 2420, 3082, 3353, 3404
SpeI ACTAGT 2 cut(s) 944, 2789
SspMI CTAG 9 cut(s) 275, 945, 1209, 2354, 2790, 3498, 3660, 3756, 4399
SstI GAGCTC 2 cut(s) 1820, 3089
StyI CCWWGG 3 cut(s) 363, 3679, 4213
TaqI TCGA 9 cut(s) 144, 228, 428, 551, 1239, 2118, 3016, 3276, 4277
TatI WGTACW 2 cut(s) 1600, 2819
TauI GCSGC 2 cut(s) 1154, 2152
TscAI CASTG 6 cut(s) 136, 1984, 2080, 2575, 3991, 4384
TspDTI ATGAA 9 cut(s) 1578, 1701, 1800, 1980, 1998, 2171, 3110, 3485, 3494
TspGWI ACGGA 3 cut(s) 361, 897, 965
TspRI CASTG 6 cut(s) 136, 1984, 2080, 2575, 3991, 4384
Vha464I CTTAAG 1 cut(s) 2287
VpaK11BI GGWCC 3 cut(s) 2555, 2864, 3688
VspI ATTAAT 1 cut(s) 2511
XapI RAATTY 4 cut(s) 323, 2261, 2670, 3922
XceI RCATGY 1 cut(s) 704
XcmI CCANNNNNNNNNTGG 4 cut(s) 370, 1837, 2930, 4211
XmnI GAANNNNTTC 3 cut(s) 494, 2262, 4302
XspI CTAG 9 cut(s) 275, 945, 1209, 2354, 2790, 3498, 3660, 3756, 4399
ZrmI AGTACT 1 cut(s) 2821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.