Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0010754

Physical Location & Seq

Genomic Coordinates Reverse (-)

5503867 .. 5508797

Gene Structure 4931 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0072000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGCGGAAGTGAAGCGGTGGAGTGTGACCTACACTAAGCACATGAAGCAGAAGCGCAAGGTTTACCAGGACGGATTCTTAGAGCTCCACACCTCCACCAATAAGATGTTGCTGTTCGACGACTGCGAGAAGCTCTTGGAGTGCAGGATCTTGAAGAAAGACGAAGCCGTTAGCTCCGGCGAAACACTCACATTCAATGCTTTTCTGGTTGATGTGAACGACGCTGAATCCGGTGACGGAGATCAGAAACCTGAATCTGGTTTCAGTTCTCGAGAAAACGACATGAAGTTCAGTGAGAAACGAGCGAAATCGTGGAATAAGCCACAGCCGTTTCAGACTCCGGCGCAAAATATAATCAGAGGAAAGAAGCCACTGCAAAATTTGAGTCCATCGCAGAATATTATCAAAGAGTTCAAGAAGAGGGAACTACACAAGTATGGTGCAGCACTTAGTAGTCCAGAGACAGTGACAACTAGCACAACAGAATGGCAGGCTTTGTACACCACACAGCTAACTCAAAAGGCGAAGAAGTATCATGATGGTTTCTTGCAACTAGCAATTACTGGGTCTCATGGAAAGCAGATAATTCTGTTGGATTCAAGCAGGAATCAGTTAGATAGCAGGTTCCTTAAGAAAGATGAAGTCATAGCATCCGGTGGATCAATAGCATTTGATGCTCATTTGGTTGATATTGGAGAGCAGGAAGGAGACCATAAACCTACGGACTTGCATCGTAAAGAAAATAAGCGGAATATTGTGGGAGAGGCAAGAATAAAGCAGGAACAGAGTAATGGTGTTATCACTGGTAAAGATGATGGAAAAGAATGGAAGGTCCTATACACTACACAAGTAACTCAAAAGGCCAAGAAGTACCATGATGGCTTCTTACAGATCACATCTAGTGGCTCCTTTGGAAGACAGGCGATGCTATTTGATGCAACTAGGAAACTCTTGGAAACCAGGTTCCTCAAAAAAGATGAAGTTATAAGCTCTGGTGAATCATTTGCATTTAATGCTCATTTGGTTGATGGCGGGGAACCTGAAGGGAATGAAGCTCAGGTTGATTTGAAGTCTCAAGGAAAAGATTGCCATGTGCAGAAATCAGGGATATTGCATAGAGAAGATGATTGCATTATAATCGATGATTTTGAACTAAAAGAGTGGGAAGCTCTATACACCACTCAGATCACTCAGAAGTCCAAGAAGTACCATGTTGGCATCCTCAGACTTGCCTCTTCTGGTTCTTTCCGTAAGAAGGTTACTTTACTTGGTGAAGATAAAACCATACTGAGTAATAAGTATGTTAGTTTGTCAGAAGATATAAAAACAGGATCTACTCTTGAGTTACCAAAATACTTGGTGGAGGTTGGTATTCCACGTGCAATTGCTGGAGGTGAAGGAACAACTCTCAACAAAGCTTGTATAAAGAAACCTTCAGACTCAAGGTTTAGCATCTCTAGTGTAGAGGAAACAAAATTAAGCAGAGGAGTCTCCAGAAACAACCCTTTATGTGATGGTGAAGAAAACTCTCAGAACAAAGCTTGTTCGAAGAAAGCCTTAAACTCAAGTTTTAGCATCTCTAGTGTAGAGGAAACAAAACCAAGCAGGGGAGTCCCTACAAACAAGCTTCTACGTGATGCCCATCAGATTTTGTCCTTTCTCCAAAACCCTATGGCTCAGGAGAGTGTAGCTTCACGTCAAGCTAACAGCACTGAAAAACCAGTTTCCTCAACTAAGGGGTCTCAAGTTTCAGATGCTATAATGGTGGATATCTCTGAAGATGTTCGGCTAGCAGAATCACAATCATCAGAACCACATAACAGATCAGTTGAAAATAAAGAACCAGGCAATATTATGGAAATTGGAATTAAAGCAATGTCCAGCGGTTGTGGCAGTCAATTAGCTGAGGGTATAGACATCAAAAACTCCCACCAGCTTCATTCAGACCATGTTGAAGCCGACACTGCACGTCATAACAGAGAATGTGCTTCTGATGAATCAAGATCAAGTTCTTGTTTTTCTCATGATGCTGCTGACGACGAGAAGATTGTATCCCAGGAGCCTAGTTGTGCAAGGAACCAAGAAAACCCAAGTTTTGAACTAGAATTCCCTAGTTTTGATCTTGGATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003999 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006163 GO:0006164 GO:0006167 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009308 GO:0009507 GO:0009536 GO:0009690 GO:0009987 GO:0010817 GO:0016740 GO:0016757 GO:0016763 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0032261 GO:0034641 GO:0034654 GO:0034754 GO:0042445 GO:0043094 GO:0043101 GO:0043173 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044209 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046033 GO:0046390 GO:0046483 GO:0055086 GO:0065007 GO:0065008 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 map00230 map01100

Pfam Domains

Protein Families

Pribosyltran

Protein Analysis

710

Amino Acids

78.97

Weight (kDa)

6.41

Isoelectric Point (pI)

46.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZGRF1-like_N	PF10382	4 - 76	6.3e-15	DNA helicase ZGRF1-like, N-terminal domain
ZGRF1-like_N	PF10382	161 - 237	1.7e-14	DNA helicase ZGRF1-like, N-terminal domain
ZGRF1-like_N	PF10382	274 - 349	2.5e-15	DNA helicase ZGRF1-like, N-terminal domain
ZGRF1-like_N	PF10382	386 - 456	7.8e-13	DNA helicase ZGRF1-like, N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12440 AT4G12440 AT4G22570
fragaria_vesca	FvH4_5g00190
malus_domestica	MD04G1085600.v1.1 MD06G1062600.v1.1
prunus_persica	Prupe.5G074000_v2.0.a1 Prupe.5G074000_v2.0.a1
pyrus_communis	pycom04g07680
rosa_chinensis	RchiOBHm_Chr7g0202681
rosa_laevigata	RLG00000003580
rosa_multiflora	Rmu_sc0002365.1_g000006
rosa_roxburghii	Rroxscaffold_3G00254400
rosa_rugosa	Rorug07G0072000 Rorug07G0072100
rosa_samantha	Rh7AG199800 Rh7BG200500 Rh7CG211300 Rh7DG206700
rosa_wichuraiana	Rw7G017490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	986, 1136
Acc36I	ACCTGC	1 cut(s)	612
AciI	CCGC	5 cut(s)	5, 16, 748, 1032, 1884
AclWI	GGATC	3 cut(s)	155, 667, 1339
AcsI	RAATTY	2 cut(s)	379, 2105
AcuI	CTGAAG	3 cut(s)	1062, 1419, 1797
AcvI	CACGTG	1 cut(s)	1379
AfaI	GTAC	3 cut(s)	500, 872, 1208
AfiI	CCNNNNNNNGG	3 cut(s)	257, 1255, 1607
AflII	CTTAAG	1 cut(s)	629
AgsI	TTSAA	9 cut(s)	154, 196, 415, 600, 1069, 1151, 1832, 1955, 2099
AjiI	CACGTC	2 cut(s)	1697, 1970
AjnI	CCWGG	4 cut(s)	66, 959, 1843, 2055
AloI	GAACNNNNNNTCC	4 cut(s)	947, 979, 2091, 2123
Alw21I	GWGCWC	1 cut(s)	87
Alw26I	GTCTC	6 cut(s)	455, 573, 702, 1077, 1495, 1746
AlwI	GGATC	3 cut(s)	155, 667, 1339
Ama87I	CYCGRG	1 cut(s)	270
AoxI	GGCC	1 cut(s)	861
ApeKI	GCWGC	2 cut(s)	443, 2030
ApoI	RAATTY	2 cut(s)	379, 2105
ArsI	GACNNNNNNTTYG	2 cut(s)	370, 402
Asp700I	GAANNNNTTC	1 cut(s)	1782
AspLEI	GCGC	2 cut(s)	57, 346
AspS9I	GGNCC	1 cut(s)	832
AsuHPI	GGTGA	5 cut(s)	245, 1007, 1283, 1406, 1529
AsuII	TTCGAA	1 cut(s)	1547
AsuNHI	GCTAGC	1 cut(s)	1789
AvaI	CYCGRG	1 cut(s)	270
AvaII	GGWCC	1 cut(s)	832
BanII	GRGCYC	1 cut(s)	87
BarI	GAAGNNNNNNTAC	2 cut(s)	821, 853
BbrPI	CACGTG	1 cut(s)	1379
BbsI	GAAGAC	1 cut(s)	922
Bbv12I	GWGCWC	1 cut(s)	87
BbvCI	CCTCAGC	1 cut(s)	1905
BbvI	GCAGC	2 cut(s)	455, 2017
BccI	CCATC	7 cut(s)	397, 533, 809, 872, 1022, 1508, 1650
BceAI	ACGGC	2 cut(s)	152, 313
BcgI	CGANNNNNNTGC	2 cut(s)	1120, 1154
BciT130I	CCWGG	4 cut(s)	68, 961, 1845, 2057
BciVI	GTATCC	1 cut(s)	2062
BcoDI	GTCTC	6 cut(s)	455, 573, 702, 1077, 1495, 1746
BfrI	CTTAAG	1 cut(s)	629
BfuAI	ACCTGC	1 cut(s)	612
BfuI	GTATCC	1 cut(s)	2062
BisI	GCNGC	2 cut(s)	444, 2031
BlsI	GCNGC	2 cut(s)	445, 2032
Bme1390I	CCNGG	4 cut(s)	68, 961, 1845, 2057
Bme18I	GGWCC	1 cut(s)	832
BmeT110I	CYCGRG	1 cut(s)	270
BmgBI	CACGTC	2 cut(s)	1697, 1970
BmgT120I	GGNCC	1 cut(s)	832
BmiI	GGNNCC	6 cut(s)	626, 907, 965, 1038, 2061, 2078
BmrFI	CCNGG	4 cut(s)	68, 961, 1845, 2057
BmrI	ACTGGG	1 cut(s)	573
BmtI	GCTAGC	1 cut(s)	1793
BmuI	ACTGGG	1 cut(s)	573
BpiI	GAAGAC	1 cut(s)	922
BpmI	CTGGAG	2 cut(s)	1410, 1477
Bpu10I	CCTNAGC	3 cut(s)	1056, 1677, 1905
Bpu14I	TTCGAA	1 cut(s)	1547
BpuEI	CTTGAG	5 cut(s)	1059, 1361, 1426, 1549, 1728
Bsa29I	ATCGAT	1 cut(s)	1140
BsaAI	YACGTR	2 cut(s)	1379, 1634
BsaBI	GATNNNNATC	1 cut(s)	1641
BsaI	GGTCTC	3 cut(s)	573, 702, 1746
BsaJI	CCNNGG	1 cut(s)	2055
BsaWI	WCCGGW	2 cut(s)	230, 653
Bsc4I	CCNNNNNNNGG	3 cut(s)	257, 1255, 1607
Bse1I	ACTGG	3 cut(s)	568, 808, 1721
Bse3DI	GCAATG	1 cut(s)	1881
Bse8I	GATNNNNATC	1 cut(s)	1641
BseBI	CCWGG	4 cut(s)	68, 961, 1845, 2057
BseCI	ATCGAT	1 cut(s)	1140
BseDI	CCNNGG	1 cut(s)	2055
BseGI	GGATG	2 cut(s)	650, 1218
BseJI	GATNNNNATC	1 cut(s)	1641
BseLI	CCNNNNNNNGG	3 cut(s)	257, 1255, 1607
BseMI	GCAATG	1 cut(s)	1881
BseMII	CTCAG	8 cut(s)	1070, 1196, 1205, 1237, 1280, 1544, 1691, 1896
BseNI	ACTGG	3 cut(s)	568, 808, 1721
BseRI	GAGGAG	1 cut(s)	1500
BseXI	GCAGC	2 cut(s)	455, 2017
BsgI	GTGCAG	4 cut(s)	163, 462, 1115, 1950
BshFI	GGCC	1 cut(s)	863
BshVI	ATCGAT	1 cut(s)	1140
BsiHKAI	GWGCWC	1 cut(s)	87
BsiHKCI	CYCGRG	1 cut(s)	270
BsiSI	CCGG	4 cut(s)	177, 231, 341, 654
BslFI	GGGAC	1 cut(s)	1598
BslI	CCNNNNNNNGG	3 cut(s)	257, 1255, 1607
BsmAI	GTCTC	6 cut(s)	455, 573, 702, 1077, 1495, 1746
BsmFI	GGGAC	1 cut(s)	1598
BsnI	GGCC	1 cut(s)	863
Bso31I	GGTCTC	3 cut(s)	573, 702, 1746
BsoBI	CYCGRG	1 cut(s)	270
Bsp119I	TTCGAA	1 cut(s)	1547
Bsp1286I	GDGCHC	1 cut(s)	87
Bsp1407I	TGTACA	1 cut(s)	498
Bsp143I	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
BspACI	CCGC	5 cut(s)	5, 16, 748, 1032, 1884
BspANI	GGCC	1 cut(s)	863
BspCNI	CTCAG	8 cut(s)	1069, 1195, 1204, 1236, 1281, 1543, 1690, 1897
BspDI	ATCGAT	1 cut(s)	1140
BspHI	TCATGA	2 cut(s)	535, 2023
BspLI	GGNNCC	6 cut(s)	626, 907, 965, 1038, 2061, 2078
BspMI	ACCTGC	1 cut(s)	612
BspOI	GCTAGC	1 cut(s)	1793
BspPI	GGATC	3 cut(s)	155, 667, 1339
BspT104I	TTCGAA	1 cut(s)	1547
BspTI	CTTAAG	1 cut(s)	629
BspTNI	GGTCTC	3 cut(s)	573, 702, 1746
BsrDI	GCAATG	1 cut(s)	1881
BsrGI	TGTACA	1 cut(s)	498
BsrI	ACTGG	3 cut(s)	568, 808, 1721
BssECI	CCNNGG	1 cut(s)	2055
BssMI	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
Bst2UI	CCWGG	4 cut(s)	68, 961, 1845, 2057
Bst4CI	ACNGT	1 cut(s)	466
Bst6I	CTCTTC	2 cut(s)	413, 1240
BstAFI	CTTAAG	1 cut(s)	629
BstAPI	GCANNNNNTGC	2 cut(s)	674, 1013
BstAUI	TGTACA	1 cut(s)	498
BstBAI	YACGTR	2 cut(s)	1379, 1634
BstBI	TTCGAA	1 cut(s)	1547
BstC8I	GCNNGC	2 cut(s)	492, 1791
BstF5I	GGATG	2 cut(s)	650, 1218
BstHHI	GCGC	2 cut(s)	57, 346
BstKTI	GATC	9 cut(s)	150, 244, 662, 894, 1188, 1334, 1826, 2006, 2122
BstMAI	GTCTC	6 cut(s)	455, 573, 702, 1077, 1495, 1746
BstMBI	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
BstMWI	GCNNNNNNNGC	5 cut(s)	46, 674, 1013, 1890, 1964
BstNI	CCWGG	4 cut(s)	68, 961, 1845, 2057
BstSCI	CCNGG	4 cut(s)	66, 959, 1843, 2055
BstV1I	GCAGC	2 cut(s)	455, 2017
BstV2I	GAAGAC	1 cut(s)	922
BstX2I	RGATCY	2 cut(s)	147, 1331
BstYI	RGATCY	2 cut(s)	147, 1331
Bsu15I	ATCGAT	1 cut(s)	1140
BsuI	GTATCC	1 cut(s)	2062
BsuRI	GGCC	1 cut(s)	863
BsuTUI	ATCGAT	1 cut(s)	1140
BtgZI	GCGATG	2 cut(s)	375, 938
BtrI	CACGTC	2 cut(s)	1697, 1970
BtsCI	GGATG	2 cut(s)	650, 1218
BtsI	GCAGTG	2 cut(s)	371, 1962
BtsIMutI	CAGTG	6 cut(s)	298, 371, 471, 801, 1710, 1962
BveI	ACCTGC	1 cut(s)	612
Cac8I	GCNNGC	2 cut(s)	492, 1791
CciI	TCATGA	2 cut(s)	535, 2023
CfoI	GCGC	2 cut(s)	57, 346
Cfr13I	GGNCC	1 cut(s)	832
ClaI	ATCGAT	1 cut(s)	1140
CseI	GACGC	1 cut(s)	230
CsiI	ACCWGGT	1 cut(s)	959
Csp6I	GTAC	3 cut(s)	499, 871, 1207
CviAII	CATG	9 cut(s)	43, 283, 536, 572, 875, 1091, 1211, 1949, 2024
CviQI	GTAC	3 cut(s)	499, 871, 1207
DpnI	GATC	9 cut(s)	149, 243, 661, 893, 1187, 1333, 1825, 2005, 2121
DpnII	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
Eam1104I	CTCTTC	2 cut(s)	413, 1240
EarI	CTCTTC	2 cut(s)	413, 1240
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	85
Eco24I	GRGCYC	1 cut(s)	87
Eco31I	GGTCTC	3 cut(s)	573, 702, 1746
Eco32I	GATATC	1 cut(s)	1771
Eco47I	GGWCC	1 cut(s)	832
Eco53kI	GAGCTC	1 cut(s)	85
Eco57I	CTGAAG	3 cut(s)	1062, 1419, 1797
Eco72I	CACGTG	1 cut(s)	1379
Eco88I	CYCGRG	1 cut(s)	270
EcoICRI	GAGCTC	1 cut(s)	85
EcoO109I	RGGNCCY	1 cut(s)	832
EcoRI	GAATTC	1 cut(s)	2105
EcoRII	CCWGG	4 cut(s)	66, 959, 1843, 2055
EcoRV	GATATC	1 cut(s)	1771
EcoT38I	GRGCYC	1 cut(s)	87
FaeI	CATG	9 cut(s)	46, 286, 539, 575, 878, 1094, 1214, 1952, 2027
FalI	AAGNNNNNCTT	2 cut(s)	1541, 1573
FaqI	GGGAC	1 cut(s)	1598
FatI	CATG	9 cut(s)	42, 282, 535, 571, 874, 1090, 1210, 1948, 2023
FauI	CCCGC	1 cut(s)	1025
Fnu4HI	GCNGC	2 cut(s)	444, 2031
FokI	GGATG	2 cut(s)	637, 1205
FriOI	GRGCYC	1 cut(s)	87
Fsp4HI	GCNGC	2 cut(s)	444, 2031
GlaI	GCGC	2 cut(s)	56, 345
GluI	GCNGC	2 cut(s)	444, 2031
GsuI	CTGGAG	2 cut(s)	1410, 1477
HaeIII	GGCC	1 cut(s)	863
HapII	CCGG	4 cut(s)	177, 231, 341, 654
HgaI	GACGC	1 cut(s)	230
HhaI	GCGC	2 cut(s)	57, 346
Hin1II	CATG	9 cut(s)	46, 286, 539, 575, 878, 1094, 1214, 1952, 2027
Hin6I	GCGC	2 cut(s)	55, 344
HinP1I	GCGC	2 cut(s)	55, 344
HindIII	AAGCTT	3 cut(s)	1416, 1539, 1625
HpaII	CCGG	4 cut(s)	177, 231, 341, 654
HphI	GGTGA	5 cut(s)	245, 1007, 1283, 1406, 1529
Hpy166II	GTNNAC	3 cut(s)	64, 217, 501
Hpy8I	GTNNAC	3 cut(s)	64, 217, 501
Hpy99I	CGWCG	3 cut(s)	122, 224, 2042
HpyAV	CCTTC	6 cut(s)	698, 823, 1037, 1249, 1391, 1443
HpyCH4III	ACNGT	1 cut(s)	466
HpyCH4IV	ACGT	4 cut(s)	1378, 1633, 1696, 1969
HpyF10VI	GCNNNNNNNGC	5 cut(s)	46, 674, 1013, 1890, 1964
HpySE526I	ACGT	4 cut(s)	1378, 1633, 1696, 1969
Hsp92II	CATG	9 cut(s)	46, 286, 539, 575, 878, 1094, 1214, 1952, 2027
HspAI	GCGC	2 cut(s)	55, 344
Kzo9I	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
LmnI	GCTCC	4 cut(s)	90, 179, 911, 2059
Lsp1109I	GCAGC	2 cut(s)	455, 2017
MabI	ACCWGGT	1 cut(s)	959
MaeII	ACGT	4 cut(s)	1378, 1633, 1696, 1969
MaeIII	GTNAC	6 cut(s)	25, 233, 466, 850, 1258, 1344
MalI	GATC	9 cut(s)	149, 243, 661, 893, 1187, 1333, 1825, 2005, 2121
MboI	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
MfeI	CAATTG	1 cut(s)	1383
MflI	RGATCY	2 cut(s)	147, 1331
MhlI	GDGCHC	1 cut(s)	87
MluCI	AATT	9 cut(s)	379, 558, 585, 1383, 1475, 1860, 1866, 1898, 2105
MlyI	GAGTC	5 cut(s)	331, 394, 1433, 1497, 1620
MmeI	TCCRAC	1 cut(s)	573
MroXI	GAANNNNTTC	1 cut(s)	1782
MseI	TTAA	6 cut(s)	630, 1011, 1478, 1559, 1869, 2131
MslI	CAYNNNNRTG	1 cut(s)	435
MspA1I	CMGCKG	1 cut(s)	1884
MspCI	CTTAAG	1 cut(s)	629
MspI	CCGG	4 cut(s)	177, 231, 341, 654
MspR9I	CCNGG	4 cut(s)	68, 961, 1845, 2057
MunI	CAATTG	1 cut(s)	1383
MvaI	CCWGG	4 cut(s)	68, 961, 1845, 2057
MwoI	GCNNNNNNNGC	5 cut(s)	46, 674, 1013, 1890, 1964
NdeII	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
NheI	GCTAGC	1 cut(s)	1789
NlaIII	CATG	9 cut(s)	46, 286, 539, 575, 878, 1094, 1214, 1952, 2027
NlaIV	GGNNCC	6 cut(s)	626, 907, 965, 1038, 2061, 2078
NmuCI	GTSAC	3 cut(s)	25, 233, 466
NspV	TTCGAA	1 cut(s)	1547
PaeR7I	CTCGAG	1 cut(s)	270
PagI	TCATGA	2 cut(s)	535, 2023
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PdmI	GAANNNNTTC	1 cut(s)	1782
PfeI	GAWTC	8 cut(s)	75, 227, 254, 596, 607, 998, 1796, 1997
PkrI	GCNGC	2 cut(s)	445, 2032
PleI	GAGTC	5 cut(s)	331, 393, 1433, 1496, 1619
PmaCI	CACGTG	1 cut(s)	1379
PmlI	CACGTG	1 cut(s)	1379
PpsI	GAGTC	5 cut(s)	331, 393, 1433, 1496, 1619
Ppu21I	YACGTR	2 cut(s)	1379, 1634
PpuMI	RGGWCCY	1 cut(s)	832
PsiI	TTATAA	2 cut(s)	986, 1136
Psp124BI	GAGCTC	1 cut(s)	87
Psp5II	RGGWCCY	1 cut(s)	832
Psp6I	CCWGG	4 cut(s)	66, 959, 1843, 2055
PspCI	CACGTG	1 cut(s)	1379
PspGI	CCWGG	4 cut(s)	66, 959, 1843, 2055
PspN4I	GGNNCC	6 cut(s)	626, 907, 965, 1038, 2061, 2078
PspPI	GGNCC	1 cut(s)	832
PspPPI	RGGWCCY	1 cut(s)	832
PsuI	RGATCY	2 cut(s)	147, 1331
RsaI	GTAC	3 cut(s)	500, 872, 1208
RsaNI	GTAC	3 cut(s)	499, 871, 1207
RseI	CAYNNNNRTG	1 cut(s)	435
SacI	GAGCTC	1 cut(s)	87
SaqAI	TTAA	6 cut(s)	630, 1011, 1478, 1559, 1869, 2131
SatI	GCNGC	2 cut(s)	444, 2031
Sau3AI	GATC	9 cut(s)	147, 241, 659, 891, 1185, 1331, 1823, 2003, 2119
Sau96I	GGNCC	1 cut(s)	832
SchI	GAGTC	5 cut(s)	331, 394, 1433, 1497, 1620
ScrFI	CCNGG	4 cut(s)	68, 961, 1845, 2057
SduI	GDGCHC	1 cut(s)	87
SexAI	ACCWGGT	1 cut(s)	959
Sfr274I	CTCGAG	1 cut(s)	270
SfuI	TTCGAA	1 cut(s)	1547
SinI	GGWCC	1 cut(s)	832
SlaI	CTCGAG	1 cut(s)	270
SmiMI	CAYNNNNRTG	1 cut(s)	435
SmlI	CTYRAG	7 cut(s)	270, 629, 1074, 1340, 1441, 1564, 1743
SmoI	CTYRAG	7 cut(s)	270, 629, 1074, 1340, 1441, 1564, 1743
Sse9I	AATT	9 cut(s)	379, 558, 585, 1383, 1475, 1860, 1866, 1898, 2105
SsiI	CCGC	5 cut(s)	5, 16, 748, 1032, 1884
SspI	AATATT	3 cut(s)	400, 754, 1852
SstI	GAGCTC	1 cut(s)	87
StyD4I	CCNGG	4 cut(s)	66, 959, 1843, 2055
TaaI	ACNGT	1 cut(s)	466
TaiI	ACGT	4 cut(s)	1381, 1636, 1699, 1972
TaqI	TCGA	4 cut(s)	117, 271, 1140, 1547
TasI	AATT	9 cut(s)	379, 558, 585, 1383, 1475, 1860, 1866, 1898, 2105
TatI	WGTACW	1 cut(s)	498
TfiI	GAWTC	8 cut(s)	75, 227, 254, 596, 607, 998, 1796, 1997
Tru1I	TTAA	6 cut(s)	630, 1011, 1478, 1559, 1869, 2131
Tru9I	TTAA	6 cut(s)	630, 1011, 1478, 1559, 1869, 2131
TscAI	CASTG	6 cut(s)	298, 378, 471, 808, 1717, 1969
TseFI	GTSAC	3 cut(s)	25, 233, 466
TseI	GCWGC	2 cut(s)	443, 2030
Tsp45I	GTSAC	3 cut(s)	25, 233, 466
TspDTI	ATGAA	7 cut(s)	59, 299, 654, 993, 1065, 1928, 2010
TspGWI	ACGGA	4 cut(s)	87, 252, 737, 1238
TspRI	CASTG	6 cut(s)	298, 378, 471, 808, 1717, 1969
Vha464I	CTTAAG	1 cut(s)	629
VpaK11BI	GGWCC	1 cut(s)	832
XapI	RAATTY	2 cut(s)	379, 2105
XhoI	CTCGAG	1 cut(s)	270
XmnI	GAANNNNTTC	1 cut(s)	1782

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.