Rorug07G0073100

14 kDa proline-rich protein DC2.15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0014899
Physical Location & Seq
Forward (+)
5628202 .. 5632093
3892 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0073100.1

Sequence Viewer

Length: 2001 bp
ATGGCTGGCTCCTGGAGAGCGCGCAATTCTCTGATCGTCTTCGCGATCGTCACATTAGGGTGTCTCTTTGCAATTTCAATTGCAAAGGAGGAGACTGCCAAGTTGGGAACAGTCATTGGGATTGATCTTGGAACAACTTATTCCTGTGTTGGTGTGTATAAGAACGGTCATGTGGAAATTATAGCCAATGACCAAGGAAACCGTATCACCCCATCGTGGGTGGCTTTCACTGACAGTGAAAGGCTGATCGGTGAGGCTGCAAAGAATCAGGCAGCTGTGAACCATGAAAGGACCGTCTTTGATGTCAAGAGACTTATCGGAAGAAAGTTCGCTGACAAAGAGGTCCAGAGGGACATGAAGCTTGTTCCTTTCAAGATTGTTAACCAGGATGGAAAGCCTTATATTCAAGTAAAGATCAAGGATGGTGAAACCAAGGTTTTCAGTCCTGAGGAGATCAGTGCTATGATTTTGATCAAGATGAAGGAAACAGCAGAAGCATTCCTTGGAAAGAAAATCAAGGATGCTGTTGTTACTGTTCCTGCATACTTCAATGATGCTCAGAGACAGGCAACCAAGGATGCTGGTGTCATTGCTGGGCTTAATGTTGCTAGGATTATCAATGAACCAACCGCAGCAGCTATCGCATATGGTTTGGACAAGAGGGGTGGTGAAAAGAACATTCTCGTCTTTGACCTTGGTGGTGGTACTTTTGATGTCAGTATTCTGACAATTGATAATGGTGTCTTTGAGGTTCTTGCCACAAACGGTGACACTCATTTGGGAGGTGAGGACTTTGACCAGAGGATCATGGAGTACTTCATCAAGTTGATCAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCCCTTGGTAAACTGAGGAGGGAAGCTGAGCGTGCCAAGAGAGCCCTCAGTAGCCAGCACCAAGTCCGTGTTGAAATTGAATCACTTTTTGATGGAACTGACTTTTCTGAACCACTGACCAGAGCTAGATTTGAGGAATTGAACAACGACTTGTTCAGAAAGACTATGGGACCAGTGAAGAAGGCCATGGATGATGCTGGCTTGGAGAAGCGCCAGATTGATGAAATTGTTCTTGTTGGTGGAAGCACCAGGATTCCAAAGGTCCAACAGCTCCTCAAGGATTACTTTGATGGCAAGGAACCAAACAAGGGTGTGAACCCTGATGAGGCAGTTGCTTATGGTGCTGCCGTACAAGGAAGCATTTTGAGTGGAGAGGGTGGTGAAGAGACCAAAGATATTCTTCTCTTGGATGTTGCACCTCTTACCCTTGGTATTGAGACTGTTGGTGGAGTGATGACCAAGTTGATCCCCAGAAACACTGTGATCCCAACCAAGAAGTCCCAAGTTTTCACCACTTACCAGGATCAGCAGACTACTGTCTCCATTCAGGTCTTTGAGGGTGAAAGGAGTCTCACAAAGGATTGTAGAAACCTTGGAAAGTTCGACCTTACTGGAATTCCTCCAGCTCCAAGGGGTACTCCTCAGATCGAAGTCACATTCGAAGTGGATGCCAACGGTATCCTGAATGTCAAGGCAGAAGACAAGGGCACTGGTAAATCCGAGAAGATCACCATCACCAACGACAAGGGTCGTCTGAGCCAGGAGGAGATTGAGCGCATGGTTAAGGAGGCCGAGGAGTTCGCTGAGGAAGACAAGAAGGTCAAGGAGAAAATTGACGCCCGTAACAGCCTCGAAACCTACACTTACAACATGAAGAACCAAGTCAATGACAAGGACAAGCTTGCTGACAAGCTCGAGTCTGATGAGAAGGAGAAGATTGAGACCGCAGTGAAGGAAGCCCTTGAATGGCTGGATGACAACCAGACCGCCGAGAAGGAAGACTACGAGGAGAAGCTCAAGGAGGTCGAAGCCGTCTGCAACCCGATCATCACAGCTGTCTACCAGAGGTCAGGTGGTGCCCCAGGTGGTGAATCAGCATCCGAGGATGATGATTCTCACGACGAGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Hydrophob_seed

Protein Analysis

666

Amino Acids

73.55

Weight (kDa)

5.16

Isoelectric Point (pI)

28.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 38 - 645 1.2e-263 Hsp70 protein
MreB_Mbl PF06723 156 - 405 8.1e-15 MreB/Mbl protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014899)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G12100
fragaria_vesca FvH4_5g00130
malus_domestica MD04G1086500.v1.1 MD06G1062200.v1.1
prunus_persica Prupe.5G073500_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0202771
rosa_laevigata RLG00000003573
rosa_multiflora Rmu_sc0002590.1_g000010 Rmu_sc0003429.1_g000002
rosa_roxburghii Rroxscaffold_3G00254290
rosa_rugosa Rorug07G0073100
rosa_samantha Rh7AG200600 Rh7BG201100 Rh7CG212000 Rh7DG207700
rosa_wichuraiana Rw7G017550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 341, 1688
AccB1I GGYRCC 1 cut(s) 1946
AccI GTMKAC 1 cut(s) 1929
AccII CGCG 2 cut(s) 22, 44
AciI CCGC 3 cut(s) 630, 1815, 1857
AclWI GGATC 4 cut(s) 812, 1330, 1348, 1401
AcsI RAATTY 1 cut(s) 1485
AcyI GRCGYC 1 cut(s) 1707
AfaI GTAC 4 cut(s) 706, 815, 1221, 1507
AfiI CCNNNNNNNGG 5 cut(s) 216, 217, 1178, 1195, 1836
AgsI TTSAA 8 cut(s) 78, 373, 407, 550, 944, 950, 1012, 1835
AjnI CCWGG 6 cut(s) 11, 384, 1118, 1389, 1629, 1951
AjuI GAANNNNNNNTTGG 2 cut(s) 486, 518
Alw21I GWGCWC 1 cut(s) 1998
Alw26I GTCTC 9 cut(s) 68, 86, 304, 556, 1250, 1301, 1414, 1445, 1805
AlwI GGATC 4 cut(s) 812, 1330, 1348, 1401
Ama87I CYCGRG 1 cut(s) 1784
AoxI GGCC 2 cut(s) 1053, 1659
ApeKI GCWGC 5 cut(s) 257, 272, 632, 635, 1214
ApoI RAATTY 1 cut(s) 1485
Asp700I GAANNNNTTC 1 cut(s) 1098
AspLEI GCGC 4 cut(s) 22, 24, 1083, 1647
AspS9I GGNCC 4 cut(s) 291, 343, 1040, 1132
AsuII TTCGAA 1 cut(s) 1530
AvaI CYCGRG 1 cut(s) 1784
AvaII GGWCC 4 cut(s) 291, 343, 1040, 1132
AxyI CCTNAGG 1 cut(s) 447
BaeGI GKGCMC 2 cut(s) 1580, 1951
BanI GGYRCC 1 cut(s) 1946
BanII GRGCYC 3 cut(s) 874, 916, 1998
BarI GAAGNNNNNNTAC 2 cut(s) 1856, 1888
BbsI GAAGAC 4 cut(s) 31, 1575, 1686, 1875
Bbv12I GWGCWC 1 cut(s) 1998
BbvCI CCTCAGC 1 cut(s) 1674
BbvI GCAGC 5 cut(s) 244, 284, 644, 647, 1201
BccI CCATC 6 cut(s) 220, 383, 416, 956, 1154, 1610
BceAI ACGGC 2 cut(s) 1202, 1886
BcgI CGANNNNNNTGC 2 cut(s) 1520, 1554
BciT130I CCWGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
BciVI GTATCC 1 cut(s) 1559
BclI TGATCA 2 cut(s) 471, 828
BcoDI GTCTC 9 cut(s) 68, 86, 304, 556, 1250, 1301, 1414, 1445, 1805
BfaI CTAG 2 cut(s) 609, 996
BfoI RGCGCY 1 cut(s) 1084
BfuI GTATCC 1 cut(s) 1559
BisI GCNGC 5 cut(s) 258, 273, 633, 636, 1215
BlpI GCTNAGC 1 cut(s) 897
BlsI GCNGC 5 cut(s) 259, 274, 634, 637, 1216
BmcAI AGTACT 1 cut(s) 815
Bme1390I CCNGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
Bme18I GGWCC 4 cut(s) 291, 343, 1040, 1132
BmeT110I CYCGRG 1 cut(s) 1784
BmgT120I GGNCC 4 cut(s) 291, 343, 1040, 1132
BmiI GGNNCC 4 cut(s) 10, 1041, 1170, 1948
BmrFI CCNGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
BmsI GCATC 6 cut(s) 511, 544, 568, 1054, 1528, 1976
BoxI GACNNNNGTC 2 cut(s) 1406, 1617
BpiI GAAGAC 4 cut(s) 31, 1575, 1686, 1875
BpmI CTGGAG 2 cut(s) 34, 1476
Bpu10I CCTNAGC 1 cut(s) 1674
Bpu1102I GCTNAGC 1 cut(s) 897
Bpu14I TTCGAA 1 cut(s) 1530
BpuEI CTTGAG 2 cut(s) 1130, 1871
BsaBI GATNNNNATC 2 cut(s) 470, 1601
BsaHI GRCGYC 1 cut(s) 1707
BsaI GGTCTC 2 cut(s) 1250, 1805
Bsc4I CCNNNNNNNGG 5 cut(s) 216, 217, 1178, 1195, 1836
Bse1I ACTGG 3 cut(s) 1043, 1486, 1585
Bse21I CCTNAGG 1 cut(s) 447
Bse3DI GCAATG 1 cut(s) 588
Bse8I GATNNNNATC 2 cut(s) 470, 1601
BseBI CCWGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
BseJI GATNNNNATC 2 cut(s) 470, 1601
BseLI CCNNNNNNNGG 5 cut(s) 216, 217, 1178, 1195, 1836
BseMI GCAATG 1 cut(s) 588
BseMII CTCAG 8 cut(s) 438, 572, 875, 888, 931, 1526, 1616, 1665
BseNI ACTGG 3 cut(s) 1043, 1486, 1585
BsePI GCGCGC 1 cut(s) 20
BseRI GAGGAG 8 cut(s) 104, 464, 901, 1133, 1500, 1649, 1679, 1892
BseSI GKGCMC 2 cut(s) 1580, 1951
BseXI GCAGC 5 cut(s) 244, 284, 644, 647, 1201
BseYI CCCAGC 1 cut(s) 593
Bsh1236I CGCG 2 cut(s) 22, 44
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 2 cut(s) 1055, 1661
BshNI GGYRCC 1 cut(s) 1946
BsiEI CGRYCG 1 cut(s) 48
BsiHKAI GWGCWC 1 cut(s) 1998
BsiHKCI CYCGRG 1 cut(s) 1784
BslFI GGGAC 3 cut(s) 365, 1053, 1354
BslI CCNNNNNNNGG 5 cut(s) 216, 217, 1178, 1195, 1836
BsmAI GTCTC 9 cut(s) 68, 86, 304, 556, 1250, 1301, 1414, 1445, 1805
BsmFI GGGAC 3 cut(s) 365, 1053, 1354
BsmI GAATGC 1 cut(s) 497
BsnI GGCC 2 cut(s) 1055, 1661
Bso31I GGTCTC 2 cut(s) 1250, 1805
BsoBI CYCGRG 1 cut(s) 1784
Bsp119I TTCGAA 1 cut(s) 1530
Bsp1286I GDGCHC 5 cut(s) 874, 916, 1580, 1951, 1998
Bsp1720I GCTNAGC 1 cut(s) 897
Bsp19I CCATGG 1 cut(s) 1056
Bsp68I TCGCGA 1 cut(s) 44
BspACI CCGC 3 cut(s) 630, 1815, 1857
BspANI GGCC 2 cut(s) 1055, 1661
BspCNI CTCAG 8 cut(s) 439, 571, 876, 889, 930, 1525, 1617, 1666
BspFNI CGCG 2 cut(s) 22, 44
BspLI GGNNCC 4 cut(s) 10, 1041, 1170, 1948
BspPI GGATC 4 cut(s) 812, 1330, 1348, 1401
BspT104I TTCGAA 1 cut(s) 1530
BspT107I GGYRCC 1 cut(s) 1946
BspTNI GGTCTC 2 cut(s) 1250, 1805
BsrDI GCAATG 1 cut(s) 588
BsrI ACTGG 3 cut(s) 1043, 1486, 1585
BssHII GCGCGC 1 cut(s) 20
BssNI GRCGYC 1 cut(s) 1707
Bst2UI CCWGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
Bst6I CTCTTC 1 cut(s) 1248
BstACI GRCGYC 1 cut(s) 1707
BstBI TTCGAA 1 cut(s) 1530
BstC8I GCNNGC 6 cut(s) 7, 22, 903, 926, 1069, 1773
BstDEI CTNAG 8 cut(s) 447, 558, 884, 897, 917, 1512, 1625, 1674
BstDSI CCRYGG 1 cut(s) 1056
BstFNI CGCG 2 cut(s) 22, 44
BstH2I RGCGCY 1 cut(s) 1084
BstHHI GCGC 4 cut(s) 22, 24, 1083, 1647
BstMAI GTCTC 9 cut(s) 68, 86, 304, 556, 1250, 1301, 1414, 1445, 1805
BstMCI CGRYCG 1 cut(s) 48
BstMWI GCNNNNNNNGC 4 cut(s) 641, 902, 911, 1211
BstNI CCWGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
BstPAI GACNNNNGTC 2 cut(s) 1406, 1617
BstSCI CCNGG 6 cut(s) 11, 384, 1118, 1389, 1629, 1951
BstSLI GKGCMC 2 cut(s) 1580, 1951
BstUI CGCG 2 cut(s) 22, 44
BstV1I GCAGC 5 cut(s) 244, 284, 644, 647, 1201
BstV2I GAAGAC 4 cut(s) 31, 1575, 1686, 1875
Bsu36I CCTNAGG 1 cut(s) 447
BsuI GTATCC 1 cut(s) 1559
BsuRI GGCC 2 cut(s) 1055, 1661
BtgI CCRYGG 1 cut(s) 1056
BtsI GCAGTG 1 cut(s) 1824
BtsIMutI CAGTG 8 cut(s) 228, 241, 463, 983, 1050, 1347, 1578, 1824
BtuMI TCGCGA 1 cut(s) 44
Cac8I GCNNGC 6 cut(s) 7, 22, 903, 926, 1069, 1773
CfoI GCGC 4 cut(s) 22, 24, 1083, 1647
Cfr13I GGNCC 4 cut(s) 291, 343, 1040, 1132
CseI GACGC 1 cut(s) 1715
Csp6I GTAC 4 cut(s) 705, 814, 1220, 1506
CspCI CAANNNNNGTGG 2 cut(s) 646, 681
CviAII CATG 7 cut(s) 170, 284, 355, 808, 1057, 1648, 1741
CviQI GTAC 4 cut(s) 705, 814, 1220, 1506
DdeI CTNAG 8 cut(s) 447, 558, 884, 897, 917, 1512, 1625, 1674
DrdI GACNNNNNNGTC 2 cut(s) 341, 1688
DseDI GACNNNNNNGTC 2 cut(s) 341, 1688
Eam1104I CTCTTC 1 cut(s) 1248
EarI CTCTTC 1 cut(s) 1248
Ecl136II GAGCTC 1 cut(s) 1996
Eco24I GRGCYC 3 cut(s) 874, 916, 1998
Eco31I GGTCTC 2 cut(s) 1250, 1805
Eco47I GGWCC 4 cut(s) 291, 343, 1040, 1132
Eco53kI GAGCTC 1 cut(s) 1996
Eco81I CCTNAGG 1 cut(s) 447
Eco88I CYCGRG 1 cut(s) 1784
EcoICRI GAGCTC 1 cut(s) 1996
EcoRI GAATTC 1 cut(s) 1485
EcoRII CCWGG 6 cut(s) 11, 384, 1118, 1389, 1629, 1951
EcoT38I GRGCYC 3 cut(s) 874, 916, 1998
FaeI CATG 7 cut(s) 173, 287, 358, 811, 1060, 1651, 1744
FalI AAGNNNNNCTT 6 cut(s) 486, 518, 1139, 1171, 1254, 1286
FaqI GGGAC 3 cut(s) 365, 1053, 1354
FatI CATG 7 cut(s) 169, 283, 354, 807, 1056, 1647, 1740
FauNDI CATATG 1 cut(s) 646
FbaI TGATCA 2 cut(s) 471, 828
FblI GTMKAC 1 cut(s) 1929
Fnu4HI GCNGC 5 cut(s) 258, 273, 633, 636, 1215
FriOI GRGCYC 3 cut(s) 874, 916, 1998
Fsp4HI GCNGC 5 cut(s) 258, 273, 633, 636, 1215
FspBI CTAG 2 cut(s) 609, 996
GlaI GCGC 4 cut(s) 21, 23, 1082, 1646
GluI GCNGC 5 cut(s) 258, 273, 633, 636, 1215
GsaI CCCAGC 1 cut(s) 597
GsuI CTGGAG 2 cut(s) 34, 1476
HaeII RGCGCY 1 cut(s) 1084
HaeIII GGCC 2 cut(s) 1055, 1661
HgaI GACGC 1 cut(s) 1715
HhaI GCGC 4 cut(s) 22, 24, 1083, 1647
Hin1I GRCGYC 1 cut(s) 1707
Hin1II CATG 7 cut(s) 173, 287, 358, 811, 1060, 1651, 1744
Hin6I GCGC 4 cut(s) 20, 22, 1081, 1645
HinP1I GCGC 4 cut(s) 20, 22, 1081, 1645
HincII GTYRAC 1 cut(s) 382
HindII GTYRAC 1 cut(s) 382
HindIII AAGCTT 2 cut(s) 359, 1769
HinfI GANTC 7 cut(s) 265, 950, 1123, 1438, 1787, 1961, 1982
HpaI GTTAAC 1 cut(s) 382
Hpy166II GTNNAC 5 cut(s) 280, 382, 881, 1186, 1930
Hpy188III TCNNGA 9 cut(s) 43, 307, 346, 373, 446, 475, 832, 1552, 1988
Hpy8I GTNNAC 5 cut(s) 280, 382, 881, 1186, 1930
Hpy99I CGWCG 1 cut(s) 1994
HpyAV CCTTC 6 cut(s) 475, 1045, 1681, 1792, 1816, 1858
HpyCH4V TGCA 6 cut(s) 71, 83, 260, 542, 1286, 1908
HpyF10VI GCNNNNNNNGC 4 cut(s) 641, 902, 911, 1211
HpyF3I CTNAG 8 cut(s) 447, 558, 884, 897, 917, 1512, 1625, 1674
Hsp92I GRCGYC 1 cut(s) 1707
Hsp92II CATG 7 cut(s) 173, 287, 358, 811, 1060, 1651, 1744
HspAI GCGC 4 cut(s) 20, 22, 1081, 1645
Ksp22I TGATCA 2 cut(s) 471, 828
KspAI GTTAAC 1 cut(s) 382
LmnI GCTCC 3 cut(s) 14, 1146, 1501
Lsp1109I GCAGC 5 cut(s) 244, 284, 644, 647, 1201
LweI GCATC 6 cut(s) 511, 544, 568, 1054, 1528, 1976
MaeI CTAG 2 cut(s) 609, 996
MaeIII GTNAC 5 cut(s) 49, 529, 767, 1522, 1712
MfeI CAATTG 2 cut(s) 78, 729
MhlI GDGCHC 5 cut(s) 874, 916, 1580, 1951, 1998
MlyI GAGTC 2 cut(s) 1447, 1796
MmeI TCCRAC 1 cut(s) 1159
MroXI GAANNNNTTC 1 cut(s) 1098
MseI TTAA 3 cut(s) 381, 600, 1653
MslI CAYNNNNRTG 1 cut(s) 58
MspA1I CMGCKG 2 cut(s) 275, 1925
MspR9I CCNGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
MunI CAATTG 2 cut(s) 78, 729
Mva1269I GAATGC 1 cut(s) 497
MvaI CCWGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
MvnI CGCG 2 cut(s) 22, 44
MwoI GCNNNNNNNGC 4 cut(s) 641, 902, 911, 1211
NcoI CCATGG 1 cut(s) 1056
NdeI CATATG 1 cut(s) 646
NlaIII CATG 7 cut(s) 173, 287, 358, 811, 1060, 1651, 1744
NlaIV GGNNCC 4 cut(s) 10, 1041, 1170, 1948
NmeAIII GCCGAG 2 cut(s) 1687, 1885
NmuCI GTSAC 3 cut(s) 49, 767, 1522
NruI TCGCGA 1 cut(s) 44
NspV TTCGAA 1 cut(s) 1530
PaeR7I CTCGAG 1 cut(s) 1784
PauI GCGCGC 1 cut(s) 20
PctI GAATGC 1 cut(s) 497
PdmI GAANNNNTTC 1 cut(s) 1098
PfeI GAWTC 5 cut(s) 265, 950, 1123, 1961, 1982
PfoI TCCNGGA 1 cut(s) 11
PkrI GCNGC 5 cut(s) 259, 274, 634, 637, 1216
Ple19I CGATCG 1 cut(s) 48
PleI GAGTC 2 cut(s) 1446, 1795
PpsI GAGTC 2 cut(s) 1446, 1795
PshAI GACNNNNGTC 2 cut(s) 1406, 1617
Psp124BI GAGCTC 1 cut(s) 1998
Psp6I CCWGG 6 cut(s) 11, 384, 1118, 1389, 1629, 1951
PspFI CCCAGC 1 cut(s) 593
PspGI CCWGG 6 cut(s) 11, 384, 1118, 1389, 1629, 1951
PspN4I GGNNCC 4 cut(s) 10, 1041, 1170, 1948
PspPI GGNCC 4 cut(s) 291, 343, 1040, 1132
PspXI VCTCGAGB 1 cut(s) 1784
PteI GCGCGC 1 cut(s) 20
PvuI CGATCG 1 cut(s) 48
PvuII CAGCTG 2 cut(s) 275, 1925
RruI TCGCGA 1 cut(s) 44
RsaI GTAC 4 cut(s) 706, 815, 1221, 1507
RsaNI GTAC 4 cut(s) 705, 814, 1220, 1506
RseI CAYNNNNRTG 1 cut(s) 58
SacI GAGCTC 1 cut(s) 1998
SaqAI TTAA 3 cut(s) 381, 600, 1653
SatI GCNGC 5 cut(s) 258, 273, 633, 636, 1215
Sau96I GGNCC 4 cut(s) 291, 343, 1040, 1132
ScaI AGTACT 1 cut(s) 815
SchI GAGTC 2 cut(s) 1447, 1796
ScrFI CCNGG 6 cut(s) 13, 386, 1120, 1391, 1631, 1953
SduI GDGCHC 5 cut(s) 874, 916, 1580, 1951, 1998
SfaNI GCATC 6 cut(s) 511, 544, 568, 1054, 1528, 1976
Sfr274I CTCGAG 1 cut(s) 1784
SfuI TTCGAA 1 cut(s) 1530
SinI GGWCC 4 cut(s) 291, 343, 1040, 1132
SlaI CTCGAG 1 cut(s) 1784
SmiMI CAYNNNNRTG 1 cut(s) 58
SmlI CTYRAG 3 cut(s) 1145, 1784, 1886
SmoI CTYRAG 3 cut(s) 1145, 1784, 1886
SsiI CCGC 3 cut(s) 630, 1815, 1857
SspMI CTAG 2 cut(s) 609, 996
SstI GAGCTC 1 cut(s) 1998
StyD4I CCNGG 6 cut(s) 11, 384, 1118, 1389, 1629, 1951
TaqI TCGA 6 cut(s) 1473, 1518, 1530, 1722, 1785, 1896
TatI WGTACW 1 cut(s) 813
TfiI GAWTC 5 cut(s) 265, 950, 1123, 1961, 1982
Tru1I TTAA 3 cut(s) 381, 600, 1653
Tru9I TTAA 3 cut(s) 381, 600, 1653
TscAI CASTG 8 cut(s) 235, 241, 463, 990, 1050, 1354, 1585, 1824
TseFI GTSAC 3 cut(s) 49, 767, 1522
TseI GCWGC 5 cut(s) 257, 272, 632, 635, 1214
Tsp45I GTSAC 3 cut(s) 49, 767, 1522
TspDTI ATGAA 7 cut(s) 300, 371, 494, 636, 808, 1107, 1757
TspGWI ACGGA 2 cut(s) 858, 926
TspRI CASTG 8 cut(s) 235, 241, 463, 990, 1050, 1354, 1585, 1824
VpaK11BI GGWCC 4 cut(s) 291, 343, 1040, 1132
XapI RAATTY 1 cut(s) 1485
XcmI CCANNNNNNNNNTGG 1 cut(s) 1940
XhoI CTCGAG 1 cut(s) 1784
XmiI GTMKAC 1 cut(s) 1929
XmnI GAANNNNTTC 1 cut(s) 1098
XspI CTAG 2 cut(s) 609, 996
ZrmI AGTACT 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.