Rorug07G0195400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0017198
Physical Location & Seq
Reverse (-)
16676999 .. 16680016
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0195400.1

Sequence Viewer

Length: 1455 bp
ATGTCCGCAGTTGATGAAAGTTTTGCTAAATCAATTTGGCTTTTGCCCTATGGCGGTAGATGCCCTGAGTTAACCAACATAAAATGGCAGGTCTCTCCTATCTCTGCTCATCCGACAATGCAACTCTTATCTCGGCACGTAGCAGTGATCGGCGCCGGCGCCTCCGGCCTGGTGGCGGCACGTGAGCTCCGGCGGGAAGGTCACACTGTTGTCGTCTTCGAGCGAGGAGACCAAATCGGTGGCACGTGGATGTACACTCCAGAAGTGGAGTCCGACCCAATTGGTCTCCACCCAAACAGAAACATAGTCCACTCGAGCATGTACCAGTCTCTCAGGACCAATCTCCCAAGAGAGGTCATGGGGTTCCGGGACTACCCTTTTGTGGTCAAGGAAGGAGATAAAGACAGAGACCCGAGAAGGTTTCCGGGTCACAGAGAGGTGTTGAAGTACTTGAATGACTACGCGACCGAGTTTGGGATTTATAAGGTTGTGAGGTTCGAGAGTGAGGTGGTGTTTGTGGGTTTGGTGGAGGGTGGAAAGTGGAAGGTGAAGTCCAAGAGCAAGAGAAGTGAGGTTTTGGAAGAGGTTTATGATGCTGTGGTGGTCTGTAATGGACATCATACTGAGCCTCGTGTAGCTCAGATTCCAGGCATCAATGCATGGAAGGGGAAGCAAATTCACAGCCACAATTACCGTAATCCTGAGCCATTCAGAGATCAGGTTGTAATTTTGATAGGCAGCGGCACAAGTACTGTTGATATGTCTCGGGAGATAGCTGGAGTTGCTAAAGAAGTCCACATTGCATCTAGATCTGTTGCTGATGAAACCATTGAAAAGCACCCTGGCTATGATAACTTGTGGCTTCACTCAATGATCAAAAGTGCCCATGAAGATGGGAGCGTTGTTTTCCAAGATGAGAGTGTTGTCCATGGAGACATCATTCTTCATTGCACTGGGTACAAATATCATTTTCCTTTTCTCGAAACGAATGGCATTGTGACTGTGGATGACAACCGTGTTGGACCACTGTACAAGCATGTCTTTCCACCTGCCTTTGCACCTTCGCTTTCCTTCGTTGGTATACCATGGAAGGTCGCTCTTTTCTTCATGTTTGAACTTCAAAGCAAGTGGATAGCTGGTATTTTGTCTAATCGAATGGCACTTCCATCCCAAGAGTACATGATGGAGGATGTAAAAGCTTTCTACTCTTTACTTGAAGCTTCTGACACACCTAAGCGATACACTCATAACATTGCTGATTATCAGTATGGATATGAAGATTGGGTTGCAACCGAGTGTGGGTGTCCAGTCTCTGAGGAATGGAGAAAGCAAATGTACTTTGCAGCTATAGAGAACATGCTAACCAAACCAGAGACATTCCGGGATGAGTGGGGGGAATATGACCATTTGGTATTGCAAGCTCATGAGGACTTCAAGAAATATGCCTTGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

484

Amino Acids

55.18

Weight (kDa)

5.97

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 45 - 271 9.5e-40 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 46 - 334 2.2e-14 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 46 - 82 6.4e-08 FAD dependent oxidoreductase
FAD_oxidored PF12831 47 - 117 2.6e-06 FAD dependent oxidoreductase
FAD_binding_2 PF00890 47 - 82 3.6e-06 FAD binding domain
NAD_binding_8 PF13450 49 - 84 7.8e-11 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 55 - 126 7.3e-07 Flavin containing amine oxidoreductase
Pyr_redox_3 PF13738 113 - 283 1.1e-11 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 290 - 400 2e-15 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017198)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G24275
fragaria_vesca FvH4_5g28660
prunus_persica Prupe.1G579700_v2.0.a1
pyrus_communis pycom08g21010
rosa_chinensis RchiOBHm_Chr7g0220641
rosa_laevigata RLG00000002213
rosa_multiflora Rmu_ssc0000189.1_g000015
rosa_rugosa Rorug07G0195400
rosa_samantha Rh7AG336600 Rh7BG327500 Rh7CG354400 Rh7DG332900
rosa_wichuraiana Rw7G028700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 483
AarI CACCTGC 1 cut(s) 1057
Acc36I ACCTGC 2 cut(s) 79, 1057
AccB1I GGYRCC 2 cut(s) 152, 158
AccI GTMKAC 1 cut(s) 1081
AccII CGCG 1 cut(s) 464
AciI CCGC 5 cut(s) 6, 54, 176, 193, 741
AcsI RAATTY 1 cut(s) 675
AcvI CACGTG 2 cut(s) 182, 246
AcyI GRCGYC 2 cut(s) 153, 159
AfaI GTAC 8 cut(s) 254, 323, 449, 751, 959, 1031, 1178, 1337
AfiI CCNNNNNNNGG 6 cut(s) 53, 175, 352, 382, 474, 1299
AgsI TTSAA 8 cut(s) 445, 454, 833, 1115, 1121, 1217, 1435, 1450
AjnI CCWGG 3 cut(s) 168, 646, 841
AluBI AGCT 8 cut(s) 187, 638, 776, 1136, 1199, 1220, 1346, 1421
AluI AGCT 8 cut(s) 187, 638, 776, 1136, 1199, 1220, 1346, 1421
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 9 cut(s) 97, 222, 290, 333, 402, 768, 927, 1315, 1367
AlwNI CAGNNNCTG 1 cut(s) 1313
Ama87I CYCGRG 3 cut(s) 313, 412, 765
AoxI GGCC 1 cut(s) 166
ApeKI GCWGC 2 cut(s) 738, 1343
ApoI RAATTY 1 cut(s) 675
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
AspLEI GCGC 2 cut(s) 155, 161
AspS9I GGNCC 2 cut(s) 336, 1022
AsuC2I CCSGG 3 cut(s) 368, 426, 1382
AsuHPI GGTGA 1 cut(s) 559
AvaI CYCGRG 3 cut(s) 313, 412, 765
AvaII GGWCC 2 cut(s) 336, 1022
BaeGI GKGCMC 1 cut(s) 886
BanI GGYRCC 2 cut(s) 152, 158
BanII GRGCYC 1 cut(s) 189
BauI CACGAG 1 cut(s) 630
BbrPI CACGTG 2 cut(s) 182, 246
BbsI GAAGAC 1 cut(s) 208
Bbv12I GWGCWC 1 cut(s) 189
BbvI GCAGC 2 cut(s) 750, 1355
BccI CCATC 3 cut(s) 887, 1174, 1177
BciT130I CCWGG 3 cut(s) 170, 648, 843
BclI TGATCA 1 cut(s) 873
BcnI CCSGG 3 cut(s) 368, 426, 1382
BcoDI GTCTC 9 cut(s) 97, 222, 290, 333, 402, 768, 927, 1315, 1367
BfaI CTAG 1 cut(s) 807
BfmI CTRYAG 1 cut(s) 1347
BfoI RGCGCY 2 cut(s) 156, 162
BfuAI ACCTGC 2 cut(s) 79, 1057
BglII AGATCT 1 cut(s) 809
BisI GCNGC 4 cut(s) 177, 739, 742, 1344
BlsI GCNGC 4 cut(s) 178, 740, 743, 1345
BmcAI AGTACT 2 cut(s) 449, 751
Bme1390I CCNGG 6 cut(s) 170, 368, 426, 648, 843, 1382
Bme18I GGWCC 2 cut(s) 336, 1022
BmeT110I CYCGRG 3 cut(s) 313, 412, 765
BmgT120I GGNCC 2 cut(s) 336, 1022
BmiI GGNNCC 3 cut(s) 154, 160, 365
BmrFI CCNGG 6 cut(s) 170, 368, 426, 648, 843, 1382
BmrI ACTGGG 1 cut(s) 963
BmsI GCATC 4 cut(s) 50, 583, 660, 812
BmuI ACTGGG 1 cut(s) 963
BpiI GAAGAC 1 cut(s) 208
BpmI CTGGAG 2 cut(s) 243, 798
Bpu10I CCTNAGC 2 cut(s) 702, 1233
BpuMI CCSGG 3 cut(s) 368, 426, 1382
BsaAI YACGTR 3 cut(s) 139, 182, 246
BsaHI GRCGYC 2 cut(s) 153, 159
BsaI GGTCTC 4 cut(s) 97, 222, 290, 402
BsaJI CCNNGG 3 cut(s) 841, 928, 1085
BsaXI ACNNNNNCTCC 2 cut(s) 171, 201
Bsc4I CCNNNNNNNGG 6 cut(s) 53, 175, 352, 382, 474, 1299
Bse118I RCCGGY 1 cut(s) 155
Bse1I ACTGG 3 cut(s) 325, 958, 1307
Bse3DI GCAATG 3 cut(s) 798, 946, 1251
BseBI CCWGG 3 cut(s) 170, 648, 843
BseDI CCNNGG 3 cut(s) 841, 928, 1085
BseGI GGATG 6 cut(s) 109, 255, 1012, 1166, 1195, 1390
BseLI CCNNNNNNNGG 6 cut(s) 53, 175, 352, 382, 474, 1299
BseMI GCAATG 3 cut(s) 798, 946, 1251
BseMII CTCAG 6 cut(s) 57, 346, 615, 653, 693, 1305
BseNI ACTGG 3 cut(s) 325, 958, 1307
BseRI GAGGAG 1 cut(s) 240
BseSI GKGCMC 1 cut(s) 886
BseXI GCAGC 2 cut(s) 750, 1355
Bsh1236I CGCG 1 cut(s) 464
Bsh1285I CGRYCG 1 cut(s) 468
BshFI GGCC 1 cut(s) 168
BshNI GGYRCC 2 cut(s) 152, 158
BsiEI CGRYCG 1 cut(s) 468
BsiHKAI GWGCWC 1 cut(s) 189
BsiHKCI CYCGRG 3 cut(s) 313, 412, 765
BsiSI CCGG 6 cut(s) 156, 165, 190, 367, 425, 1381
BslFI GGGAC 1 cut(s) 383
BslI CCNNNNNNNGG 6 cut(s) 53, 175, 352, 382, 474, 1299
BsmAI GTCTC 9 cut(s) 97, 222, 290, 333, 402, 768, 927, 1315, 1367
BsmFI GGGAC 1 cut(s) 383
BsnI GGCC 1 cut(s) 168
Bso31I GGTCTC 4 cut(s) 97, 222, 290, 402
BsoBI CYCGRG 3 cut(s) 313, 412, 765
Bsp1286I GDGCHC 2 cut(s) 189, 886
Bsp1407I TGTACA 2 cut(s) 252, 1029
Bsp143I GATC 4 cut(s) 147, 715, 809, 873
Bsp19I CCATGG 2 cut(s) 928, 1085
BspACI CCGC 5 cut(s) 6, 54, 176, 193, 741
BspANI GGCC 1 cut(s) 168
BspCNI CTCAG 6 cut(s) 58, 345, 616, 652, 694, 1306
BspFNI CGCG 1 cut(s) 464
BspHI TCATGA 1 cut(s) 1423
BspLI GGNNCC 3 cut(s) 154, 160, 365
BspMI ACCTGC 2 cut(s) 79, 1057
BspT107I GGYRCC 2 cut(s) 152, 158
BspTNI GGTCTC 4 cut(s) 97, 222, 290, 402
BsrDI GCAATG 3 cut(s) 798, 946, 1251
BsrFI RCCGGY 1 cut(s) 155
BsrGI TGTACA 2 cut(s) 252, 1029
BsrI ACTGG 3 cut(s) 325, 958, 1307
BssAI RCCGGY 1 cut(s) 155
BssECI CCNNGG 3 cut(s) 841, 928, 1085
BssMI GATC 4 cut(s) 147, 715, 809, 873
BssNAI GTATAC 1 cut(s) 1082
BssNI GRCGYC 2 cut(s) 153, 159
BssSI CACGAG 1 cut(s) 630
BssT1I CCWWGG 2 cut(s) 928, 1085
Bst1107I GTATAC 1 cut(s) 1082
Bst2BI CACGAG 1 cut(s) 630
Bst2UI CCWGG 3 cut(s) 170, 648, 843
Bst4CI ACNGT 6 cut(s) 208, 695, 754, 1003, 1016, 1029
Bst6I CTCTTC 1 cut(s) 576
BstACI GRCGYC 2 cut(s) 153, 159
BstAUI TGTACA 2 cut(s) 252, 1029
BstBAI YACGTR 3 cut(s) 139, 182, 246
BstC8I GCNNGC 2 cut(s) 157, 1419
BstDEI CTNAG 7 cut(s) 66, 332, 624, 639, 702, 1233, 1314
BstDSI CCRYGG 2 cut(s) 928, 1085
BstF5I GGATG 6 cut(s) 109, 255, 1012, 1166, 1195, 1390
BstFNI CGCG 1 cut(s) 464
BstH2I RGCGCY 2 cut(s) 156, 162
BstHHI GCGC 2 cut(s) 155, 161
BstKTI GATC 4 cut(s) 150, 718, 812, 876
BstMAI GTCTC 9 cut(s) 97, 222, 290, 333, 402, 768, 927, 1315, 1367
BstMBI GATC 4 cut(s) 147, 715, 809, 873
BstMCI CGRYCG 1 cut(s) 468
BstMWI GCNNNNNNNGC 3 cut(s) 60, 165, 782
BstNI CCWGG 3 cut(s) 170, 648, 843
BstNSI RCATGY 3 cut(s) 322, 1040, 1360
BstSCI CCNGG 6 cut(s) 168, 366, 424, 646, 841, 1380
BstSFI CTRYAG 1 cut(s) 1347
BstSLI GKGCMC 1 cut(s) 886
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 2 cut(s) 750, 1355
BstV2I GAAGAC 1 cut(s) 208
BstX2I RGATCY 1 cut(s) 809
BstXI CCANNNNNNTGG 2 cut(s) 239, 893
BstYI RGATCY 1 cut(s) 809
BstZ17I GTATAC 1 cut(s) 1082
BsuRI GGCC 1 cut(s) 168
BtgI CCRYGG 2 cut(s) 928, 1085
BtsCI GGATG 6 cut(s) 109, 255, 1012, 1166, 1195, 1390
BtsI GCAGTG 1 cut(s) 150
BtsIMutI CAGTG 4 cut(s) 150, 204, 951, 1025
BveI ACCTGC 2 cut(s) 79, 1057
Cac8I GCNNGC 2 cut(s) 157, 1419
CaiI CAGNNNCTG 1 cut(s) 1313
CciI TCATGA 1 cut(s) 1423
CfoI GCGC 2 cut(s) 155, 161
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 2 cut(s) 336, 1022
Csp6I GTAC 8 cut(s) 253, 322, 448, 750, 958, 1030, 1177, 1336
CspCI CAANNNNNGTGG 2 cut(s) 1109, 1144
CviQI GTAC 8 cut(s) 253, 322, 448, 750, 958, 1030, 1177, 1336
DdeI CTNAG 7 cut(s) 66, 332, 624, 639, 702, 1233, 1314
DinI GGCGCC 2 cut(s) 154, 160
DpnI GATC 4 cut(s) 149, 717, 811, 875
DpnII GATC 4 cut(s) 147, 715, 809, 873
Eam1104I CTCTTC 1 cut(s) 576
EarI CTCTTC 1 cut(s) 576
Ecl136II GAGCTC 1 cut(s) 187
Eco130I CCWWGG 2 cut(s) 928, 1085
Eco24I GRGCYC 1 cut(s) 189
Eco31I GGTCTC 4 cut(s) 97, 222, 290, 402
Eco47I GGWCC 2 cut(s) 336, 1022
Eco53kI GAGCTC 1 cut(s) 187
Eco72I CACGTG 2 cut(s) 182, 246
Eco88I CYCGRG 3 cut(s) 313, 412, 765
EcoICRI GAGCTC 1 cut(s) 187
EcoRII CCWGG 3 cut(s) 168, 646, 841
EcoT14I CCWWGG 2 cut(s) 928, 1085
EcoT22I ATGCAT 1 cut(s) 661
EcoT38I GRGCYC 1 cut(s) 189
EgeI GGCGCC 2 cut(s) 154, 160
EheI GGCGCC 2 cut(s) 154, 160
ErhI CCWWGG 2 cut(s) 928, 1085
FalI AAGNNNNNCTT 2 cut(s) 1025, 1057
FaqI GGGAC 1 cut(s) 383
FauI CCCGC 1 cut(s) 186
FbaI TGATCA 1 cut(s) 873
FblI GTMKAC 1 cut(s) 1081
Fnu4HI GCNGC 4 cut(s) 177, 739, 742, 1344
FokI GGATG 6 cut(s) 96, 262, 1019, 1153, 1202, 1397
FriOI GRGCYC 1 cut(s) 189
Fsp4HI GCNGC 4 cut(s) 177, 739, 742, 1344
FspBI CTAG 1 cut(s) 807
GlaI GCGC 2 cut(s) 154, 160
GluI GCNGC 4 cut(s) 177, 739, 742, 1344
GsuI CTGGAG 2 cut(s) 243, 798
HaeII RGCGCY 2 cut(s) 156, 162
HaeIII GGCC 1 cut(s) 168
HapII CCGG 6 cut(s) 156, 165, 190, 367, 425, 1381
HhaI GCGC 2 cut(s) 155, 161
Hin1I GRCGYC 2 cut(s) 153, 159
Hin6I GCGC 2 cut(s) 153, 159
HinP1I GCGC 2 cut(s) 153, 159
HincII GTYRAC 1 cut(s) 72
HindII GTYRAC 1 cut(s) 72
HindIII AAGCTT 2 cut(s) 1197, 1218
HinfI GANTC 2 cut(s) 269, 643
HpaI GTTAAC 1 cut(s) 72
HpaII CCGG 6 cut(s) 156, 165, 190, 367, 425, 1381
HphI GGTGA 1 cut(s) 559
Hpy166II GTNNAC 5 cut(s) 72, 255, 310, 796, 1082
Hpy188I TCNGA 6 cut(s) 114, 274, 642, 713, 1225, 1315
Hpy188III TCNNGA 9 cut(s) 260, 334, 499, 701, 767, 807, 980, 1424, 1435
Hpy8I GTNNAC 5 cut(s) 72, 255, 310, 796, 1082
HpyAV CCTTC 8 cut(s) 191, 386, 411, 538, 658, 1071, 1081, 1084
HpyCH4III ACNGT 6 cut(s) 208, 695, 754, 1003, 1016, 1029
HpyCH4IV ACGT 3 cut(s) 138, 181, 245
HpyCH4V TGCA 8 cut(s) 121, 659, 803, 951, 1058, 1289, 1343, 1417
HpyF10VI GCNNNNNNNGC 3 cut(s) 60, 165, 782
HpyF3I CTNAG 7 cut(s) 66, 332, 624, 639, 702, 1233, 1314
HpySE526I ACGT 3 cut(s) 138, 181, 245
Hsp92I GRCGYC 2 cut(s) 153, 159
HspAI GCGC 2 cut(s) 153, 159
KasI GGCGCC 2 cut(s) 152, 158
KroI GCCGGC 1 cut(s) 155
KroNI GCCGGC 1 cut(s) 157
Ksp22I TGATCA 1 cut(s) 873
KspAI GTTAAC 1 cut(s) 72
Kzo9I GATC 4 cut(s) 147, 715, 809, 873
LmnI GCTCC 2 cut(s) 192, 897
Lsp1109I GCAGC 2 cut(s) 750, 1355
LweI GCATC 4 cut(s) 50, 583, 660, 812
MaeI CTAG 1 cut(s) 807
MaeII ACGT 3 cut(s) 138, 181, 245
MaeIII GTNAC 3 cut(s) 200, 428, 997
MalI GATC 4 cut(s) 149, 717, 811, 875
MboI GATC 4 cut(s) 147, 715, 809, 873
MboII GAAGA 6 cut(s) 208, 593, 902, 935, 1096, 1289
MfeI CAATTG 1 cut(s) 279
MflI RGATCY 1 cut(s) 809
MhlI GDGCHC 2 cut(s) 189, 886
MluCI AATT 6 cut(s) 33, 279, 675, 688, 726, 1450
Mly113I GGCGCC 2 cut(s) 153, 159
MlyI GAGTC 1 cut(s) 278
MmeI TCCRAC 3 cut(s) 137, 297, 1000
Mph1103I ATGCAT 1 cut(s) 661
MreI CGCCGGCG 1 cut(s) 155
MroNI GCCGGC 1 cut(s) 155
MseI TTAA 1 cut(s) 71
MslI CAYNNNNRTG 2 cut(s) 248, 891
MspA1I CMGCKG 1 cut(s) 741
MspI CCGG 6 cut(s) 156, 165, 190, 367, 425, 1381
MspR9I CCNGG 6 cut(s) 170, 368, 426, 648, 843, 1382
MunI CAATTG 1 cut(s) 279
MvaI CCWGG 3 cut(s) 170, 648, 843
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 3 cut(s) 60, 165, 782
NaeI GCCGGC 1 cut(s) 157
NarI GGCGCC 2 cut(s) 153, 159
NciI CCSGG 3 cut(s) 368, 426, 1382
NcoI CCATGG 2 cut(s) 928, 1085
NdeII GATC 4 cut(s) 147, 715, 809, 873
NgoMIV GCCGGC 1 cut(s) 155
NlaIV GGNNCC 3 cut(s) 154, 160, 365
NmeAIII GCCGAG 1 cut(s) 112
NmuCI GTSAC 3 cut(s) 200, 428, 997
NsiI ATGCAT 1 cut(s) 661
NspI RCATGY 3 cut(s) 322, 1040, 1360
PaeR7I CTCGAG 1 cut(s) 313
PagI TCATGA 1 cut(s) 1423
PaqCI CACCTGC 1 cut(s) 1057
PdiI GCCGGC 1 cut(s) 157
PfeI GAWTC 1 cut(s) 643
PfoI TCCNGGA 2 cut(s) 366, 1380
PkrI GCNGC 4 cut(s) 178, 740, 743, 1345
PleI GAGTC 1 cut(s) 277
PluTI GGCGCC 2 cut(s) 156, 162
PmaCI CACGTG 2 cut(s) 182, 246
PmlI CACGTG 2 cut(s) 182, 246
PpsI GAGTC 1 cut(s) 277
Ppu21I YACGTR 3 cut(s) 139, 182, 246
PsiI TTATAA 1 cut(s) 483
Psp124BI GAGCTC 1 cut(s) 189
Psp6I CCWGG 3 cut(s) 168, 646, 841
PspCI CACGTG 2 cut(s) 182, 246
PspGI CCWGG 3 cut(s) 168, 646, 841
PspN4I GGNNCC 3 cut(s) 154, 160, 365
PspPI GGNCC 2 cut(s) 336, 1022
PspXI VCTCGAGB 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 1313
PsuI RGATCY 1 cut(s) 809
RsaI GTAC 8 cut(s) 254, 323, 449, 751, 959, 1031, 1178, 1337
RsaNI GTAC 8 cut(s) 253, 322, 448, 750, 958, 1030, 1177, 1336
RseI CAYNNNNRTG 2 cut(s) 248, 891
SacI GAGCTC 1 cut(s) 189
SaqAI TTAA 1 cut(s) 71
SatI GCNGC 4 cut(s) 177, 739, 742, 1344
Sau3AI GATC 4 cut(s) 147, 715, 809, 873
Sau96I GGNCC 2 cut(s) 336, 1022
ScaI AGTACT 2 cut(s) 449, 751
SchI GAGTC 1 cut(s) 278
ScrFI CCNGG 6 cut(s) 170, 368, 426, 648, 843, 1382
SduI GDGCHC 2 cut(s) 189, 886
SfaNI GCATC 4 cut(s) 50, 583, 660, 812
SfcI CTRYAG 1 cut(s) 1347
SfoI GGCGCC 2 cut(s) 154, 160
Sfr274I CTCGAG 1 cut(s) 313
SgrAI CRCCGGYG 1 cut(s) 155
SinI GGWCC 2 cut(s) 336, 1022
SlaI CTCGAG 1 cut(s) 313
SmiMI CAYNNNNRTG 2 cut(s) 248, 891
SmlI CTYRAG 1 cut(s) 313
SmoI CTYRAG 1 cut(s) 313
Sse9I AATT 6 cut(s) 33, 279, 675, 688, 726, 1450
SsiI CCGC 5 cut(s) 6, 54, 176, 193, 741
SspDI GGCGCC 2 cut(s) 152, 158
SspMI CTAG 1 cut(s) 807
SstI GAGCTC 1 cut(s) 189
StyD4I CCNGG 6 cut(s) 168, 366, 424, 646, 841, 1380
StyI CCWWGG 2 cut(s) 928, 1085
TaaI ACNGT 6 cut(s) 208, 695, 754, 1003, 1016, 1029
TaiI ACGT 3 cut(s) 141, 184, 248
TaqI TCGA 5 cut(s) 219, 314, 498, 981, 1153
TaqII GACCGA 1 cut(s) 482
TasI AATT 6 cut(s) 33, 279, 675, 688, 726, 1450
TatI WGTACW 6 cut(s) 252, 447, 749, 1029, 1176, 1335
TauI GCSGC 2 cut(s) 179, 744
TfiI GAWTC 1 cut(s) 643
Tru1I TTAA 1 cut(s) 71
Tru9I TTAA 1 cut(s) 71
TscAI CASTG 4 cut(s) 150, 211, 958, 1032
TseFI GTSAC 3 cut(s) 200, 428, 997
TseI GCWGC 2 cut(s) 738, 1343
Tsp45I GTSAC 3 cut(s) 200, 428, 997
TspDTI ATGAA 6 cut(s) 30, 837, 903, 935, 1096, 1290
TspRI CASTG 4 cut(s) 150, 211, 958, 1032
VpaK11BI GGWCC 2 cut(s) 336, 1022
XapI RAATTY 1 cut(s) 675
XbaI TCTAGA 1 cut(s) 806
XceI RCATGY 3 cut(s) 322, 1040, 1360
XhoI CTCGAG 1 cut(s) 313
XmiI GTMKAC 1 cut(s) 1081
XspI CTAG 1 cut(s) 807
ZrmI AGTACT 2 cut(s) 449, 751
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.