Rorug07G0307400
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
30881542 .. 30881862
321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0307400.1

Sequence Viewer

Length: 321 bp
ATGGTGAAATTGCAAGCTCTAAGTGCTCGTAAAGCAAAGCCATCTAATAAGGAAATGAAGGAAAATGATTTCAAGCAAATGTTGTGTGATGACAATGAAAAGCCTGCTCAACAAGAAGTGGGGATCAATTTCGTTGTGGAAATATTTGCTAAAAGGAAGGAAGAAGATGCTCAGACATTTGTTGAGGATATACCTGAAGCAGAAATCATAGATTGCTTTACTGAAGAGGAGCAAAAAGAAGATGTGGCGGATGAAGAATACCAACCTCCTTTGGATCAAGAAGAACCTGCCATGAGAAACTGTTCGAGTGAGAGTGACTGA

Protein Analysis

106

Amino Acids

12.23

Weight (kDa)

4.26

Isoelectric Point (pI)

66.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 295
AciI CCGC 1 cut(s) 248
AclWI GGATC 2 cut(s) 131, 282
AcuI CTGAAG 2 cut(s) 216, 243
AgsI TTSAA 1 cut(s) 73
AluBI AGCT 1 cut(s) 17
AluI AGCT 1 cut(s) 17
Alw21I GWGCWC 1 cut(s) 28
AlwI GGATC 2 cut(s) 131, 282
Asp700I GAANNNNTTC 1 cut(s) 301
AsuHPI GGTGA 1 cut(s) 16
Bbv12I GWGCWC 1 cut(s) 28
BccI CCATC 1 cut(s) 49
BfuAI ACCTGC 1 cut(s) 295
BmsI GCATC 1 cut(s) 157
BseGI GGATG 1 cut(s) 256
BseMII CTCAG 1 cut(s) 185
BseRI GAGGAG 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 28
Bsp1286I GDGCHC 1 cut(s) 28
Bsp143I GATC 2 cut(s) 123, 274
BspACI CCGC 1 cut(s) 248
BspCNI CTCAG 1 cut(s) 184
BspMI ACCTGC 1 cut(s) 295
BspPI GGATC 2 cut(s) 131, 282
BssMI GATC 2 cut(s) 123, 274
Bst4CI ACNGT 1 cut(s) 302
Bst6I CTCTTC 1 cut(s) 219
BstC8I GCNNGC 2 cut(s) 15, 105
BstDEI CTNAG 2 cut(s) 20, 171
BstF5I GGATG 1 cut(s) 256
BstKTI GATC 2 cut(s) 126, 277
BstMBI GATC 2 cut(s) 123, 274
BstMWI GCNNNNNNNGC 2 cut(s) 23, 32
BtsCI GGATG 1 cut(s) 256
BveI ACCTGC 1 cut(s) 295
Cac8I GCNNGC 2 cut(s) 15, 105
CviAII CATG 1 cut(s) 292
CviJI RGCY 3 cut(s) 17, 40, 103
CviKI_1 RGCY 3 cut(s) 17, 40, 103
DdeI CTNAG 2 cut(s) 20, 171
DpnI GATC 2 cut(s) 125, 276
DpnII GATC 2 cut(s) 123, 274
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
EciI GGCGGA 1 cut(s) 263
Eco57I CTGAAG 2 cut(s) 216, 243
FaeI CATG 1 cut(s) 295
FaiI YATR 3 cut(s) 191, 209, 293
FatI CATG 1 cut(s) 291
FokI GGATG 1 cut(s) 263
Hin1II CATG 1 cut(s) 295
HphI GGTGA 1 cut(s) 16
Hpy188I TCNGA 1 cut(s) 174
Hpy188III TCNNGA 1 cut(s) 278
HpyAV CCTTC 2 cut(s) 52, 151
HpyCH4III ACNGT 1 cut(s) 302
HpyCH4V TGCA 1 cut(s) 13
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 32
HpyF3I CTNAG 2 cut(s) 20, 171
Hsp92II CATG 1 cut(s) 295
Kzo9I GATC 2 cut(s) 123, 274
LmnI GCTCC 1 cut(s) 229
LpnPI CCDG 3 cut(s) 117, 207, 300
LweI GCATC 1 cut(s) 157
MaeIII GTNAC 1 cut(s) 314
MalI GATC 2 cut(s) 125, 276
MboI GATC 2 cut(s) 123, 274
MboII GAAGA 6 cut(s) 173, 176, 236, 251, 266, 293
MhlI GDGCHC 1 cut(s) 28
MluCI AATT 2 cut(s) 8, 127
MnlI CCTC 3 cut(s) 178, 220, 276
MroXI GAANNNNTTC 1 cut(s) 301
MwoI GCNNNNNNNGC 2 cut(s) 23, 32
NdeII GATC 2 cut(s) 123, 274
NlaIII CATG 1 cut(s) 295
NmuCI GTSAC 1 cut(s) 314
PdmI GAANNNNTTC 1 cut(s) 301
Sau3AI GATC 2 cut(s) 123, 274
SduI GDGCHC 1 cut(s) 28
SetI ASST 4 cut(s) 19, 196, 268, 289
SfaNI GCATC 1 cut(s) 157
SgeI CNNG 9 cut(s) 26, 39, 85, 116, 125, 206, 290, 299, 304
Sse9I AATT 2 cut(s) 8, 127
SsiI CCGC 1 cut(s) 248
SspI AATATT 1 cut(s) 144
TaaI ACNGT 1 cut(s) 302
TaqI TCGA 1 cut(s) 305
TasI AATT 2 cut(s) 8, 127
TseFI GTSAC 1 cut(s) 314
Tsp45I GTSAC 1 cut(s) 314
TspDTI ATGAA 3 cut(s) 71, 111, 267
XmnI GAANNNNTTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.