Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001319

Physical Location & Seq

Genomic Coordinates Forward (+)

36351454 .. 36353721

Gene Structure 2268 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0331800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGATCGCTTCCGGCTTCCACCCACGTGGCCATATCCTCAACCGTTTGATCGACGTCTACTGCAAATCTTCAAATCTTCGCTACGCACTCCACCTGTTCGACCAAATTCCCAACCCGGACATCGTCGCCAGAACGACTCTGGTCTCGGCATATTCCGGCGTCGGGGACGTCACGCTGGCCCGGAGAGTCTTCAGTGAAACTCCGCTCAGCATGAGAGACACTGTTAGCTACAATGCCATGATCGCTGGCTACTCTCATAACAGGGACGGCAATGCCGCCGTTGAGCTGTTTCGTGACATGAGGCGAGGCGGTTTTCGCCCCGATGAGTTTACCTTCACCAGTGTGCTGAGTTCTCTGGCGCTTATAGTGGAGGAGGAGAAGCAATGCCAGCAGCTGCATTGTGCAATTGTTAAGTCTGGAGCATTGCTGGCCACTTCGGTGTCGAATGCGTTGGTGTCTGTGTATGTTAAGTGTGCTTCTTCTTCGCCGTTGGTGGTGGCTGCAGCGAGGAAGGTGTTTGATGAAATGCCTAAGAGAGATGAGCTGTCGTGGACGACGATGATTACTGGCTATGTGAGGAATGAGGACCTTGATGGAGCTCGGCAGCTGCTTGATGGGATGGATGAAAAATTGCAAGTGGCGTGGAATGCGATGATTTCGGGTTATGTGCATCACGGTTTTTGTCATGAAGCATTGAAATTGTTTAGGGAAATGCATTTAATGGGGATTCGCCAGGATGAGTTTACGTATACGAGTGTTATCAGTGCTTGTGCTAACAATGGCTTATTTAAGCATGGGAAGCAGCTGCATGCTTACATACTAAGATCTGAAGCGAAACCGACTCTGGACTTTTCTTTATCTGTGAATAATGCATTGGTGACACTATACTTTAGGTGCGGTAAAATTGATGAAGCACGATATATTTTTAATAATATGTCTGTCAGAGATCTTGTTTCTTGGAATGCGATATTGTCAGGGTATGTGAGTGCAGGGCGCATTCAGGAAGCAAAGTCCTTTTTTGATGAAATGCTGGAAAGGAGTGGTCTAACGTGGACTGTAATAATATCTGGTTTAGCTCAAAATGGATGTGGAGAAGAAGCTATGAAGCTATTTAACCAAATGAGATTAGATGGTTTTAAACCCTGTGATTATGCATTTGCTGGAGCTATTACGTCTTGTGCTGCTCTTGGAGCATTGGAGCACGGACGCCAGCTCCATGCTCAACTAATATGCTTGGGGCATGATTCAAGCCTTTCAGTCGGAAATTCACTTATTACGATGTATGCCAGATGTGGGGTTGTAGATGATGCTGACTTTGTGTTCCTTACAATGCCTTATATTGATTCCGTGTCGTGGAATGCTATGATCGCAGCTCTGGCACAACATGGATATGGTGTCCAAGCAATAAGACTTTTCGAACAAATGTTGGAGGAAGATATACTGCCAGATAGAATAACTTTCCTCACTATTCTCTCAGCTTGTAGTCATGCTGGTTTAGTTAAAGAAGGACGCCATTATTTTCGTTTAATGCATGACTCTTATGGTATTGCCCCTGGTGAAGATCATTATGCTCGTATGATTGATTTGTTGTGCCGATCTGGGGAGTTGACAGAGGCCAAGGACTTAATCAAATCAATGCCTTTTGAACCAGGTGCACCGATATGGGAGGCTATTCTAGCTGGTTGCCGGACTCATGGGAATATGGATTTAGGTATTCAAGCTGCAGAACGACTCTTTGAGCTGGTGCCCCAGCATGATGGAACCTATGTACTTTTGTCGAACTTGTATGCTGCTTTAGGCCGTTGGGATAATGTGGCTAAGGTGCGAACACTAATGAGGGAGCGAGGGGTGAAGAAAGAACCTGGTTGTAGTTGGATTGACGTTGAAAATATGGTCCATGTCTTCTTGGTTGGTGATACTGTGCACCCTGAGGTACATGAGGTGTACAAGTATCTAGAGCAACTTGTTCTTAAAATGAGGAAGTTAGGATATGTTCCTGACACAAAGTTTGCGTTGCATGATATGGAGTCTGAGCATAAAGAGAATTCCTTGTCTACTCACAGTGAGAAGCTTGCAGTTGCATTTGGGATTATGAAGCTTCCTCTTGGAGCCACAATCAGAGTTTTTAAGAATCTTAGGATTTGTGGGGATTGCCATAATGCATTTAAGTTTATGTCAAGAGTGGTTGGGAGAGAAATAGTCGTGAGAGACGCCAAGAGGTTTCATCATTTTAGGAAAGGCGAATGCTCTTGTGGAAATTACTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0007154 GO:0008150 GO:0008272 GO:0008509 GO:0009267 GO:0009605 GO:0009970 GO:0009987 GO:0009991 GO:0015075 GO:0015103 GO:0015116 GO:0015318 GO:0015698 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0034220 GO:0042594 GO:0044425 GO:0044459 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0071496 GO:0071944 GO:0072348 GO:0098656 GO:0098660 GO:0098661 GO:1901682 GO:1902358

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

STAS Sulfate_transp

Protein Analysis

755

Amino Acids

84.58

Weight (kDa)

6.59

Isoelectric Point (pI)

32.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	72 - 120	1.6e-14	PPR repeat family
PPR	PF01535	75 - 105	5.7e-07	PPR repeat
PPR_2	PF13041	213 - 259	2.4e-12	PPR repeat family
PPR	PF01535	213 - 243	3.6e-09	PPR repeat
PPR_2	PF13041	316 - 346	1.3e-06	PPR repeat family
PPR	PF01535	318 - 346	2e-07	PPR repeat
PPR_2	PF13041	350 - 393	4.9e-07	PPR repeat family
PPR	PF01535	350 - 379	8.2e-08	PPR repeat
PPR_2	PF13041	448 - 495	1.3e-10	PPR repeat family
PPR	PF01535	450 - 480	3.2e-06	PPR repeat
E_motif	PF20431	565 - 627	6.9e-22	E motif
DYW_deaminase	PF14432	663 - 755	3.4e-42	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001319)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22150 AT1G22150 AT1G22150 AT1G22150 AT1G78000 AT1G78000 AT1G78000 AT1G78000 AT1G78000 AT1G78000 AT1G78000 AT4G08620
fragaria_vesca	FvH4_5g30900 FvH4_5g30900 FvH4_5g30900 FvH4_5g38070 FvH4_5g38070
malus_domestica	MD08G1177400.v1.1 MD15G1355100.v1.1 MD15G1411900.v1.1
prunus_persica	Prupe.1G511800_v2.0.a1 Prupe.1G511800_v2.0.a1 Prupe.1G511800_v2.0.a1 Prupe.1G511800_v2.0.a1 Prupe.1G511800_v2.0.a1 Prupe.1G558300_v2.0.a1 Prupe.1G558300_v2.0.a1
pyrus_communis	pycom08g15230 pycom15g32620
rosa_chinensis	RchiOBHm_Chr7g0226191 RchiOBHm_Chr7g0240021
rosa_laevigata	RLG00000000712 RLG00000001760
rosa_multiflora	Rmu_sc0000540.1_g000009 Rmu_sc0001350.1_g000007
rosa_roxburghii	Rroxscaffold_3G00220530 Rroxscaffold_3G00233150
rosa_rugosa	Rorug07G0235500.1 Rorug07G0331600 Rorug07G0331700 Rorug07G0331800 Rorug07G0331900 Rorug07G0332000 Rorug07G0332100
rosa_samantha	Rh7AG382400 Rh7AG485600 Rh7BG369400 Rh7BG458500 Rh7CG401900 Rh7CG502900 Rh7DG380700 Rh7DG471200
rosa_wichuraiana	Rw7G032020 Rw7G040710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	57, 171
AccB1I	GGYRCC	1 cut(s)	1744
AccBSI	CCGCTC	1 cut(s)	205
AccI	GTMKAC	3 cut(s)	57, 749, 2054
AciI	CCGC	4 cut(s)	203, 276, 309, 897
AcoI	YGGCCR	2 cut(s)	28, 429
AcsI	RAATTY	3 cut(s)	105, 1264, 2044
AcuI	CTGAAG	2 cut(s)	175, 849
AcvI	CACGTG	1 cut(s)	26
AcyI	GRCGYC	6 cut(s)	54, 159, 168, 1207, 1510, 2211
AfaI	GTAC	3 cut(s)	1770, 1935, 1946
AfiI	CCNNNNNNNGG	4 cut(s)	162, 1293, 1353, 1600
AgsI	TTSAA	6 cut(s)	72, 697, 1248, 1646, 1718, 1886
AjnI	CCWGG	4 cut(s)	732, 1552, 1648, 1861
AjuI	GAANNNNNNNTTGG	2 cut(s)	857, 889
AleI	CACNNNNGTG	3 cut(s)	24, 341, 437
Alw21I	GWGCWC	4 cut(s)	601, 1203, 1657, 1926
Alw26I	GTCTC	3 cut(s)	148, 210, 2202
Alw44I	GTGCAC	2 cut(s)	1653, 1922
AlwNI	CAGNNNCTG	1 cut(s)	394
AoxI	GGCC	5 cut(s)	28, 177, 429, 1614, 1798
ApaLI	GTGCAC	2 cut(s)	1653, 1922
ApoI	RAATTY	3 cut(s)	105, 1264, 2044
ArsI	GACNNNNNNTTYG	2 cut(s)	1991, 2023
AspLEI	GCGC	2 cut(s)	361, 996
AspS9I	GGNCC	3 cut(s)	178, 586, 1894
AsuC2I	CCSGG	2 cut(s)	116, 181
AsuHPI	GGTGA	5 cut(s)	328, 889, 1568, 1861, 1925
AsuII	TTCGAA	1 cut(s)	1416
AvaII	GGWCC	2 cut(s)	586, 1894
AxyI	CCTNAGG	1 cut(s)	1929
BaeGI	GKGCMC	3 cut(s)	1657, 1749, 1926
BalI	TGGCCA	2 cut(s)	30, 431
BanI	GGYRCC	1 cut(s)	1744
BanII	GRGCYC	1 cut(s)	601
BbrPI	CACGTG	1 cut(s)	26
BbsI	GAAGAC	2 cut(s)	181, 1894
Bbv12I	GWGCWC	4 cut(s)	601, 1203, 1657, 1926
BccI	CCATC	5 cut(s)	587, 608, 613, 1124, 1751
BceAI	ACGGC	4 cut(s)	263, 283, 472, 1785
BciT130I	CCWGG	4 cut(s)	734, 1554, 1650, 1863
BcnI	CCSGG	2 cut(s)	116, 181
BcoDI	GTCTC	3 cut(s)	148, 210, 2202
BfaI	CTAG	2 cut(s)	1676, 1955
BfmI	CTRYAG	2 cut(s)	501, 1722
BfoI	RGCGCY	1 cut(s)	362
BglII	AGATCT	2 cut(s)	824, 946
BlpI	GCTNAGC	1 cut(s)	206
Bme1390I	CCNGG	6 cut(s)	116, 181, 734, 1554, 1650, 1863
Bme18I	GGWCC	2 cut(s)	586, 1894
BmgT120I	GGNCC	3 cut(s)	178, 586, 1894
BmiI	GGNNCC	3 cut(s)	1746, 1762, 2110
BmrFI	CCNGG	6 cut(s)	116, 181, 734, 1554, 1650, 1863
BmsI	GCATC	2 cut(s)	679, 1297
BoxI	GACNNNNGTC	1 cut(s)	140
BpiI	GAAGAC	2 cut(s)	181, 1894
BpmI	CTGGAG	2 cut(s)	438, 1182
Bpu10I	CCTNAGC	1 cut(s)	1818
Bpu1102I	GCTNAGC	1 cut(s)	206
Bpu14I	TTCGAA	1 cut(s)	1416
BpuMI	CCSGG	2 cut(s)	116, 181
BsaAI	YACGTR	2 cut(s)	26, 747
BsaHI	GRCGYC	6 cut(s)	54, 159, 168, 1207, 1510, 2211
BsaI	GGTCTC	1 cut(s)	148
BsaJI	CCNNGG	2 cut(s)	1552, 1617
BsaXI	ACNNNNNCTCC	2 cut(s)	1197, 1227
Bsc4I	CCNNNNNNNGG	4 cut(s)	162, 1293, 1353, 1600
Bse1I	ACTGG	3 cut(s)	339, 571, 2267
Bse21I	CCTNAGG	1 cut(s)	1929
Bse3DI	GCAATG	3 cut(s)	277, 389, 422
BseBI	CCWGG	4 cut(s)	734, 1554, 1650, 1863
BseDI	CCNNGG	2 cut(s)	1552, 1617
BseGI	GGATG	4 cut(s)	624, 628, 742, 1091
BseLI	CCNNNNNNNGG	4 cut(s)	162, 1293, 1353, 1600
BseMI	GCAATG	3 cut(s)	277, 389, 422
BseMII	CTCAG	5 cut(s)	220, 338, 1488, 1920, 2022
BseNI	ACTGG	3 cut(s)	339, 571, 2267
BseRI	GAGGAG	2 cut(s)	386, 389
BseSI	GKGCMC	3 cut(s)	1657, 1749, 1926
BseYI	CCCAGC	1 cut(s)	1749
BsgI	GTGCAG	1 cut(s)	1008
BshFI	GGCC	5 cut(s)	30, 179, 431, 1616, 1800
BshNI	GGYRCC	1 cut(s)	1744
BsiHKAI	GWGCWC	4 cut(s)	601, 1203, 1657, 1926
BsiSI	CCGG	5 cut(s)	12, 116, 156, 181, 1687
BslFI	GGGAC	2 cut(s)	179, 278
BslI	CCNNNNNNNGG	4 cut(s)	162, 1293, 1353, 1600
BsmAI	GTCTC	3 cut(s)	148, 210, 2202
BsmBI	CGTCTC	1 cut(s)	2202
BsmFI	GGGAC	2 cut(s)	179, 278
BsmI	GAATGC	6 cut(s)	451, 652, 967, 996, 1363, 2249
BsnI	GGCC	5 cut(s)	30, 179, 431, 1616, 1800
Bso31I	GGTCTC	1 cut(s)	148
Bsp119I	TTCGAA	1 cut(s)	1416
Bsp1286I	GDGCHC	5 cut(s)	601, 1203, 1657, 1749, 1926
Bsp1407I	TGTACA	1 cut(s)	1944
Bsp143I	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
Bsp1720I	GCTNAGC	1 cut(s)	206
BspACI	CCGC	4 cut(s)	203, 276, 309, 897
BspANI	GGCC	5 cut(s)	30, 179, 431, 1616, 1800
BspCNI	CTCAG	5 cut(s)	219, 339, 1487, 1921, 2023
BspHI	TCATGA	1 cut(s)	685
BspLI	GGNNCC	3 cut(s)	1746, 1762, 2110
BspMAI	CTGCAG	2 cut(s)	505, 1726
BspT104I	TTCGAA	1 cut(s)	1416
BspT107I	GGYRCC	1 cut(s)	1744
BspTNI	GGTCTC	1 cut(s)	148
BsrBI	CCGCTC	1 cut(s)	205
BsrDI	GCAATG	3 cut(s)	277, 389, 422
BsrGI	TGTACA	1 cut(s)	1944
BsrI	ACTGG	3 cut(s)	339, 571, 2267
BssECI	CCNNGG	2 cut(s)	1552, 1617
BssMI	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
BssNAI	GTATAC	1 cut(s)	750
BssNI	GRCGYC	6 cut(s)	54, 159, 168, 1207, 1510, 2211
BssT1I	CCWWGG	1 cut(s)	1617
Bst1107I	GTATAC	1 cut(s)	750
Bst2UI	CCWGG	4 cut(s)	734, 1554, 1650, 1863
Bst4CI	ACNGT	6 cut(s)	44, 223, 677, 1057, 1921, 2063
BstACI	GRCGYC	6 cut(s)	54, 159, 168, 1207, 1510, 2211
BstAUI	TGTACA	1 cut(s)	1944
BstBAI	YACGTR	2 cut(s)	26, 747
BstBI	TTCGAA	1 cut(s)	1416
BstC8I	GCNNGC	7 cut(s)	177, 247, 389, 429, 810, 1211, 2073
BstDEI	CTNAG	9 cut(s)	206, 347, 531, 821, 1474, 1818, 1929, 2031, 2135
BstF5I	GGATG	4 cut(s)	624, 628, 742, 1091
BstH2I	RGCGCY	1 cut(s)	362
BstHHI	GCGC	2 cut(s)	361, 996
BstKTI	GATC	8 cut(s)	6, 51, 243, 827, 949, 1368, 1564, 1598
BstMAI	GTCTC	3 cut(s)	148, 210, 2202
BstMBI	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
BstNI	CCWGG	4 cut(s)	734, 1554, 1650, 1863
BstNSI	RCATGY	1 cut(s)	812
BstPAI	GACNNNNGTC	1 cut(s)	140
BstSCI	CCNGG	6 cut(s)	114, 179, 732, 1552, 1648, 1861
BstSFI	CTRYAG	2 cut(s)	501, 1722
BstSLI	GKGCMC	3 cut(s)	1657, 1749, 1926
BstSNI	TACGTA	1 cut(s)	747
BstV2I	GAAGAC	2 cut(s)	181, 1894
BstX2I	RGATCY	2 cut(s)	824, 946
BstXI	CCANNNNNNTGG	2 cut(s)	26, 1757
BstYI	RGATCY	2 cut(s)	824, 946
BstZ17I	GTATAC	1 cut(s)	750
Bsu36I	CCTNAGG	1 cut(s)	1929
BsuRI	GGCC	5 cut(s)	30, 179, 431, 1616, 1800
BtgZI	GCGATG	1 cut(s)	665
BtsCI	GGATG	4 cut(s)	624, 628, 742, 1091
BtsIMutI	CAGTG	5 cut(s)	199, 219, 346, 769, 2068
Cac8I	GCNNGC	7 cut(s)	177, 247, 389, 429, 810, 1211, 2073
CaiI	CAGNNNCTG	1 cut(s)	394
CciI	TCATGA	1 cut(s)	685
CfoI	GCGC	2 cut(s)	361, 996
Cfr13I	GGNCC	3 cut(s)	178, 586, 1894
CseI	GACGC	4 cut(s)	148, 1215, 1518, 2219
CsiI	ACCWGGT	2 cut(s)	1648, 1861
Csp6I	GTAC	3 cut(s)	1769, 1934, 1945
CspCI	CAANNNNNGTGG	2 cut(s)	623, 658
CviQI	GTAC	3 cut(s)	1769, 1934, 1945
DdeI	CTNAG	9 cut(s)	206, 347, 531, 821, 1474, 1818, 1929, 2031, 2135
DpnI	GATC	8 cut(s)	5, 50, 242, 826, 948, 1367, 1563, 1597
DpnII	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
DraI	TTTAAA	1 cut(s)	1138
EaeI	YGGCCR	2 cut(s)	28, 429
Ecl136II	GAGCTC	1 cut(s)	599
Eco105I	TACGTA	1 cut(s)	747
Eco130I	CCWWGG	1 cut(s)	1617
Eco24I	GRGCYC	1 cut(s)	601
Eco31I	GGTCTC	1 cut(s)	148
Eco47I	GGWCC	2 cut(s)	586, 1894
Eco53kI	GAGCTC	1 cut(s)	599
Eco57I	CTGAAG	2 cut(s)	175, 849
Eco72I	CACGTG	1 cut(s)	26
Eco81I	CCTNAGG	1 cut(s)	1929
EcoICRI	GAGCTC	1 cut(s)	599
EcoO109I	RGGNCCY	1 cut(s)	586
EcoRI	GAATTC	1 cut(s)	2044
EcoRII	CCWGG	4 cut(s)	732, 1552, 1648, 1861
EcoT14I	CCWWGG	1 cut(s)	1617
EcoT22I	ATGCAT	5 cut(s)	717, 874, 1156, 1533, 2164
EcoT38I	GRGCYC	1 cut(s)	601
ErhI	CCWWGG	1 cut(s)	1617
Esp3I	CGTCTC	1 cut(s)	2202
FaqI	GGGAC	2 cut(s)	179, 278
FblI	GTMKAC	3 cut(s)	57, 749, 2054
FokI	GGATG	4 cut(s)	631, 635, 749, 1098
FriOI	GRGCYC	1 cut(s)	601
FspBI	CTAG	2 cut(s)	1676, 1955
GlaI	GCGC	2 cut(s)	360, 995
GsaI	CCCAGC	1 cut(s)	1753
GsuI	CTGGAG	2 cut(s)	438, 1182
HaeII	RGCGCY	1 cut(s)	362
HaeIII	GGCC	5 cut(s)	30, 179, 431, 1616, 1800
HapII	CCGG	5 cut(s)	12, 116, 156, 181, 1687
HgaI	GACGC	4 cut(s)	148, 1215, 1518, 2219
HhaI	GCGC	2 cut(s)	361, 996
Hin1I	GRCGYC	6 cut(s)	54, 159, 168, 1207, 1510, 2211
Hin6I	GCGC	2 cut(s)	359, 994
HinP1I	GCGC	2 cut(s)	359, 994
HincII	GTYRAC	1 cut(s)	1608
HindII	GTYRAC	1 cut(s)	1608
HindIII	AAGCTT	2 cut(s)	2069, 2096
HpaII	CCGG	5 cut(s)	12, 116, 156, 181, 1687
HphI	GGTGA	5 cut(s)	328, 889, 1568, 1861, 1925
Hpy188I	TCNGA	5 cut(s)	829, 944, 1262, 2032, 2120
Hpy188III	TCNNGA	9 cut(s)	293, 417, 686, 845, 1001, 1955, 1997, 2178, 2203
Hpy99I	CGWCG	4 cut(s)	56, 128, 164, 559
HpyAV	CCTTC	3 cut(s)	343, 505, 1499
HpyCH4III	ACNGT	6 cut(s)	44, 223, 677, 1057, 1921, 2063
HpyCH4IV	ACGT	7 cut(s)	25, 54, 168, 746, 1049, 1172, 1881
HpyF3I	CTNAG	9 cut(s)	206, 347, 531, 821, 1474, 1818, 1929, 2031, 2135
HpySE526I	ACGT	7 cut(s)	25, 54, 168, 746, 1049, 1172, 1881
Hsp92I	GRCGYC	6 cut(s)	54, 159, 168, 1207, 1510, 2211
HspAI	GCGC	2 cut(s)	359, 994
Kzo9I	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
LmnI	GCTCC	8 cut(s)	419, 596, 1163, 1190, 1198, 1218, 1840, 2108
LweI	GCATC	2 cut(s)	679, 1297
MabI	ACCWGGT	2 cut(s)	1648, 1861
MaeI	CTAG	2 cut(s)	1676, 1955
MaeII	ACGT	7 cut(s)	25, 54, 168, 746, 1049, 1172, 1881
MaeIII	GTNAC	3 cut(s)	169, 293, 877
MalI	GATC	8 cut(s)	5, 50, 242, 826, 948, 1367, 1563, 1597
MbiI	CCGCTC	1 cut(s)	205
MboI	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
MfeI	CAATTG	1 cut(s)	405
MflI	RGATCY	2 cut(s)	824, 946
MhlI	GDGCHC	5 cut(s)	601, 1203, 1657, 1749, 1926
MlsI	TGGCCA	2 cut(s)	30, 431
MluCI	AATT	8 cut(s)	105, 405, 629, 698, 903, 1264, 2044, 2257
MluNI	TGGCCA	2 cut(s)	30, 431
MlyI	GAGTC	7 cut(s)	130, 195, 835, 1529, 1684, 1725, 2036
MmeI	TCCRAC	3 cut(s)	1240, 1407, 1853
Mox20I	TGGCCA	2 cut(s)	30, 431
Mph1103I	ATGCAT	5 cut(s)	717, 874, 1156, 1533, 2164
MscI	TGGCCA	2 cut(s)	30, 431
MslI	CAYNNNNRTG	5 cut(s)	24, 341, 437, 1389, 1660
Msp20I	TGGCCA	2 cut(s)	30, 431
MspA1I	CMGCKG	3 cut(s)	394, 607, 805
MspI	CCGG	5 cut(s)	12, 116, 156, 181, 1687
MspR9I	CCNGG	6 cut(s)	116, 181, 734, 1554, 1650, 1863
MunI	CAATTG	1 cut(s)	405
Mva1269I	GAATGC	6 cut(s)	451, 652, 967, 996, 1363, 2249
MvaI	CCWGG	4 cut(s)	734, 1554, 1650, 1863
NciI	CCSGG	2 cut(s)	116, 181
NdeII	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
NlaIV	GGNNCC	3 cut(s)	1746, 1762, 2110
NmeAIII	GCCGAG	2 cut(s)	125, 580
NmuCI	GTSAC	3 cut(s)	169, 293, 877
NsiI	ATGCAT	5 cut(s)	717, 874, 1156, 1533, 2164
NspI	RCATGY	1 cut(s)	812
NspV	TTCGAA	1 cut(s)	1416
OliI	CACNNNNGTG	3 cut(s)	24, 341, 437
PaeI	GCATGC	1 cut(s)	812
PagI	TCATGA	1 cut(s)	685
PcsI	WCGNNNNNNNCGW	1 cut(s)	554
PctI	GAATGC	6 cut(s)	451, 652, 967, 996, 1363, 2249
PfeI	GAWTC	4 cut(s)	727, 1244, 1343, 2131
PflFI	GACNNNGTC	1 cut(s)	122
PleI	GAGTC	7 cut(s)	130, 194, 835, 1529, 1684, 1725, 2035
PmaCI	CACGTG	1 cut(s)	26
PmlI	CACGTG	1 cut(s)	26
PpsI	GAGTC	7 cut(s)	130, 194, 835, 1529, 1684, 1725, 2035
Ppu21I	YACGTR	2 cut(s)	26, 747
PpuMI	RGGWCCY	1 cut(s)	586
PshAI	GACNNNNGTC	1 cut(s)	140
Psp124BI	GAGCTC	1 cut(s)	601
Psp5II	RGGWCCY	1 cut(s)	586
Psp6I	CCWGG	4 cut(s)	732, 1552, 1648, 1861
PspCI	CACGTG	1 cut(s)	26
PspFI	CCCAGC	1 cut(s)	1749
PspGI	CCWGG	4 cut(s)	732, 1552, 1648, 1861
PspN4I	GGNNCC	3 cut(s)	1746, 1762, 2110
PspPI	GGNCC	3 cut(s)	178, 586, 1894
PspPPI	RGGWCCY	1 cut(s)	586
PstI	CTGCAG	2 cut(s)	505, 1726
PstNI	CAGNNNCTG	1 cut(s)	394
PsuI	RGATCY	2 cut(s)	824, 946
PsyI	GACNNNGTC	1 cut(s)	122
PvuII	CAGCTG	3 cut(s)	394, 607, 805
RsaI	GTAC	3 cut(s)	1770, 1935, 1946
RsaNI	GTAC	3 cut(s)	1769, 1934, 1945
RseI	CAYNNNNRTG	5 cut(s)	24, 341, 437, 1389, 1660
SacI	GAGCTC	1 cut(s)	601
Sau3AI	GATC	8 cut(s)	3, 48, 240, 824, 946, 1365, 1561, 1595
Sau96I	GGNCC	3 cut(s)	178, 586, 1894
SchI	GAGTC	7 cut(s)	130, 195, 835, 1529, 1684, 1725, 2036
ScrFI	CCNGG	6 cut(s)	116, 181, 734, 1554, 1650, 1863
SduI	GDGCHC	5 cut(s)	601, 1203, 1657, 1749, 1926
SexAI	ACCWGGT	2 cut(s)	1648, 1861
SfaNI	GCATC	2 cut(s)	679, 1297
SfcI	CTRYAG	2 cut(s)	501, 1722
SfuI	TTCGAA	1 cut(s)	1416
SinI	GGWCC	2 cut(s)	586, 1894
SmiMI	CAYNNNNRTG	5 cut(s)	24, 341, 437, 1389, 1660
SnaBI	TACGTA	1 cut(s)	747
SphI	GCATGC	1 cut(s)	812
Sse9I	AATT	8 cut(s)	105, 405, 629, 698, 903, 1264, 2044, 2257
SsiI	CCGC	4 cut(s)	203, 276, 309, 897
SspMI	CTAG	2 cut(s)	1676, 1955
SstI	GAGCTC	1 cut(s)	601
StyD4I	CCNGG	6 cut(s)	114, 179, 732, 1552, 1648, 1861
StyI	CCWWGG	1 cut(s)	1617
TaaI	ACNGT	6 cut(s)	44, 223, 677, 1057, 1921, 2063
TaiI	ACGT	7 cut(s)	28, 57, 171, 749, 1052, 1175, 1884
TaqI	TCGA	5 cut(s)	51, 99, 443, 1416, 1778
TasI	AATT	8 cut(s)	105, 405, 629, 698, 903, 1264, 2044, 2257
TatI	WGTACW	2 cut(s)	1768, 1944
TauI	GCSGC	1 cut(s)	278
TfiI	GAWTC	4 cut(s)	727, 1244, 1343, 2131
TscAI	CASTG	5 cut(s)	199, 226, 346, 769, 2068
TseFI	GTSAC	3 cut(s)	169, 293, 877
Tsp45I	GTSAC	3 cut(s)	169, 293, 877
TspDTI	ATGAA	8 cut(s)	537, 639, 702, 924, 1038, 1118, 2108, 2213
TspGWI	ACGGA	2 cut(s)	1218, 1336
TspRI	CASTG	5 cut(s)	199, 226, 346, 769, 2068
Tth111I	GACNNNGTC	1 cut(s)	122
VneI	GTGCAC	2 cut(s)	1653, 1922
VpaK11BI	GGWCC	2 cut(s)	586, 1894
XapI	RAATTY	3 cut(s)	105, 1264, 2044
XbaI	TCTAGA	1 cut(s)	1954
XceI	RCATGY	1 cut(s)	812
XcmI	CCANNNNNNNNNTGG	1 cut(s)	136
XmiI	GTMKAC	3 cut(s)	57, 749, 2054
XspI	CTAG	2 cut(s)	1676, 1955
ZraI	GACGTC	2 cut(s)	55, 169
Zsp2I	ATGCAT	5 cut(s)	717, 874, 1156, 1533, 2164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.