Vacuolar protein sorting-associated protein 8 homolog
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g11260 |
| rosa_chinensis | RchiOBHm_Chr1g0361181 |
| rosa_roxburghii | Rroxscaffold_4G00295290 |
| rosa_rugosa | Rorug01G0287300 |
| rosa_samantha | Rh1AG298100 Rh1AG298200 Rh1BG262100 Rh1CG279500 Rh1DG292200 Rh1DG292300 |
| rosa_wichuraiana | Rw0G002910 Rw1G026360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 27 |
| AcsI | RAATTY | 1 cut(s) | 231 |
| AfaI | GTAC | 1 cut(s) | 409 |
| AfeI | AGCGCT | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 391, 477 |
| AgsI | TTSAA | 2 cut(s) | 433, 466 |
| AjnI | CCWGG | 2 cut(s) | 116, 179 |
| AluBI | AGCT | 6 cut(s) | 79, 93, 156, 241, 530, 543 |
| AluI | AGCT | 6 cut(s) | 79, 93, 156, 241, 530, 543 |
| Alw21I | GWGCWC | 1 cut(s) | 310 |
| Aor51HI | AGCGCT | 1 cut(s) | 12 |
| ApeKI | GCWGC | 1 cut(s) | 203 |
| ApoI | RAATTY | 1 cut(s) | 231 |
| AspLEI | GCGC | 1 cut(s) | 13 |
| AsuHPI | GGTGA | 1 cut(s) | 203 |
| AsuII | TTCGAA | 1 cut(s) | 211 |
| Bbv12I | GWGCWC | 1 cut(s) | 310 |
| BbvI | GCAGC | 1 cut(s) | 190 |
| BccI | CCATC | 1 cut(s) | 504 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 287, 321 |
| BciT130I | CCWGG | 2 cut(s) | 118, 181 |
| BfoI | RGCGCY | 1 cut(s) | 14 |
| BfuAI | ACCTGC | 1 cut(s) | 27 |
| BisI | GCNGC | 1 cut(s) | 204 |
| BlsI | GCNGC | 1 cut(s) | 205 |
| Bme1390I | CCNGG | 2 cut(s) | 118, 181 |
| BmiI | GGNNCC | 1 cut(s) | 494 |
| BmrFI | CCNGG | 2 cut(s) | 118, 181 |
| Bpu14I | TTCGAA | 1 cut(s) | 211 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 391, 477 |
| Bse1I | ACTGG | 3 cut(s) | 109, 193, 456 |
| Bse3DI | GCAATG | 2 cut(s) | 430, 450 |
| BseBI | CCWGG | 2 cut(s) | 118, 181 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 391, 477 |
| BseMI | GCAATG | 2 cut(s) | 430, 450 |
| BseNI | ACTGG | 3 cut(s) | 109, 193, 456 |
| BseXI | GCAGC | 1 cut(s) | 190 |
| BsiHKAI | GWGCWC | 1 cut(s) | 310 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 391, 477 |
| BsmI | GAATGC | 1 cut(s) | 472 |
| Bsp119I | TTCGAA | 1 cut(s) | 211 |
| Bsp1286I | GDGCHC | 1 cut(s) | 310 |
| BspLI | GGNNCC | 1 cut(s) | 494 |
| BspMI | ACCTGC | 1 cut(s) | 27 |
| BspT104I | TTCGAA | 1 cut(s) | 211 |
| BsrDI | GCAATG | 2 cut(s) | 430, 450 |
| BsrI | ACTGG | 3 cut(s) | 109, 193, 456 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| Bst2UI | CCWGG | 2 cut(s) | 118, 181 |
| Bst4CI | ACNGT | 2 cut(s) | 84, 367 |
| BstBI | TTCGAA | 1 cut(s) | 211 |
| BstDEI | CTNAG | 1 cut(s) | 250 |
| BstH2I | RGCGCY | 1 cut(s) | 14 |
| BstHHI | GCGC | 1 cut(s) | 13 |
| BstNI | CCWGG | 2 cut(s) | 118, 181 |
| BstSCI | CCNGG | 2 cut(s) | 116, 179 |
| BstV1I | GCAGC | 1 cut(s) | 190 |
| BtsI | GCAGTG | 1 cut(s) | 225 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| BveI | ACCTGC | 1 cut(s) | 27 |
| CfoI | GCGC | 1 cut(s) | 13 |
| Csp6I | GTAC | 1 cut(s) | 408 |
| CviAII | CATG | 1 cut(s) | 391 |
| CviJI | RGCY | 8 cut(s) | 79, 93, 156, 184, 241, 345, 530, 543 |
| CviKI_1 | RGCY | 8 cut(s) | 79, 93, 156, 184, 241, 345, 530, 543 |
| CviQI | GTAC | 1 cut(s) | 408 |
| DdeI | CTNAG | 1 cut(s) | 250 |
| DraI | TTTAAA | 1 cut(s) | 504 |
| Eco47III | AGCGCT | 1 cut(s) | 12 |
| EcoRI | GAATTC | 1 cut(s) | 231 |
| EcoRII | CCWGG | 2 cut(s) | 116, 179 |
| FaeI | CATG | 1 cut(s) | 394 |
| FaiI | YATR | 8 cut(s) | 96, 146, 159, 291, 317, 392, 461, 554 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 294, 326 |
| FatI | CATG | 1 cut(s) | 390 |
| Fnu4HI | GCNGC | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 1 cut(s) | 204 |
| GlaI | GCGC | 1 cut(s) | 12 |
| GluI | GCNGC | 1 cut(s) | 204 |
| HaeII | RGCGCY | 1 cut(s) | 14 |
| HhaI | GCGC | 1 cut(s) | 13 |
| Hin1II | CATG | 1 cut(s) | 394 |
| Hin6I | GCGC | 1 cut(s) | 11 |
| HinP1I | GCGC | 1 cut(s) | 11 |
| HincII | GTYRAC | 1 cut(s) | 247 |
| HindII | GTYRAC | 1 cut(s) | 247 |
| HinfI | GANTC | 2 cut(s) | 515, 521 |
| HphI | GGTGA | 1 cut(s) | 203 |
| Hpy166II | GTNNAC | 1 cut(s) | 247 |
| Hpy188I | TCNGA | 3 cut(s) | 322, 520, 526 |
| Hpy188III | TCNNGA | 3 cut(s) | 20, 43, 228 |
| Hpy8I | GTNNAC | 1 cut(s) | 247 |
| HpyAV | CCTTC | 1 cut(s) | 296 |
| HpyCH4III | ACNGT | 2 cut(s) | 84, 367 |
| HpyCH4IV | ACGT | 1 cut(s) | 406 |
| HpyCH4V | TGCA | 1 cut(s) | 266 |
| HpyF3I | CTNAG | 1 cut(s) | 250 |
| HpySE526I | ACGT | 1 cut(s) | 406 |
| Hsp92II | CATG | 1 cut(s) | 394 |
| HspAI | GCGC | 1 cut(s) | 11 |
| LmnI | GCTCC | 2 cut(s) | 90, 335 |
| Lsp1109I | GCAGC | 1 cut(s) | 190 |
| MaeII | ACGT | 1 cut(s) | 406 |
| MaeIII | GTNAC | 1 cut(s) | 149 |
| MboII | GAAGA | 2 cut(s) | 16, 311 |
| MhlI | GDGCHC | 1 cut(s) | 310 |
| MluCI | AATT | 3 cut(s) | 172, 231, 434 |
| MnlI | CCTC | 4 cut(s) | 74, 253, 395, 433 |
| MseI | TTAA | 2 cut(s) | 372, 503 |
| MspA1I | CMGCKG | 1 cut(s) | 241 |
| MspR9I | CCNGG | 2 cut(s) | 118, 181 |
| Mva1269I | GAATGC | 1 cut(s) | 472 |
| MvaI | CCWGG | 2 cut(s) | 118, 181 |
| NlaIII | CATG | 1 cut(s) | 394 |
| NlaIV | GGNNCC | 1 cut(s) | 494 |
| NspV | TTCGAA | 1 cut(s) | 211 |
| PctI | GAATGC | 1 cut(s) | 472 |
| PfeI | GAWTC | 2 cut(s) | 515, 521 |
| PkrI | GCNGC | 1 cut(s) | 205 |
| Psp6I | CCWGG | 2 cut(s) | 116, 179 |
| PspGI | CCWGG | 2 cut(s) | 116, 179 |
| PspN4I | GGNNCC | 1 cut(s) | 494 |
| PvuII | CAGCTG | 1 cut(s) | 241 |
| RsaI | GTAC | 1 cut(s) | 409 |
| RsaNI | GTAC | 1 cut(s) | 408 |
| SaqAI | TTAA | 2 cut(s) | 372, 503 |
| SatI | GCNGC | 1 cut(s) | 204 |
| ScrFI | CCNGG | 2 cut(s) | 118, 181 |
| SduI | GDGCHC | 1 cut(s) | 310 |
| SfuI | TTCGAA | 1 cut(s) | 211 |
| Sse9I | AATT | 3 cut(s) | 172, 231, 434 |
| StyD4I | CCNGG | 2 cut(s) | 116, 179 |
| TaaI | ACNGT | 2 cut(s) | 84, 367 |
| TaiI | ACGT | 1 cut(s) | 409 |
| TaqI | TCGA | 3 cut(s) | 211, 229, 282 |
| TasI | AATT | 3 cut(s) | 172, 231, 434 |
| TfiI | GAWTC | 2 cut(s) | 515, 521 |
| Tru1I | TTAA | 2 cut(s) | 372, 503 |
| Tru9I | TTAA | 2 cut(s) | 372, 503 |
| TscAI | CASTG | 1 cut(s) | 225 |
| TseI | GCWGC | 1 cut(s) | 203 |
| TspDTI | ATGAA | 2 cut(s) | 17, 210 |
| TspGWI | ACGGA | 1 cut(s) | 505 |
| TspRI | CASTG | 1 cut(s) | 225 |
| XapI | RAATTY | 1 cut(s) | 231 |