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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0006648.1_g000008 Rmu_ssc0000272.1_g000010 |
| rosa_roxburghii | Rroxscaffold_6G00418870 |
| rosa_samantha | Rh1BG151200 Rh4DG055800 Rh5BG513000 Rh5CG536700 Rh5DG525100 Rh6DG312000 Rh7CG250900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 163, 209 |
| AclWI | GGATC | 2 cut(s) | 154, 219 |
| AcuI | CTGAAG | 1 cut(s) | 261 |
| AgsI | TTSAA | 2 cut(s) | 68, 266 |
| AluBI | AGCT | 1 cut(s) | 191 |
| AluI | AGCT | 1 cut(s) | 191 |
| AlwI | GGATC | 2 cut(s) | 154, 219 |
| AspS9I | GGNCC | 2 cut(s) | 93, 217 |
| AvaII | GGWCC | 2 cut(s) | 93, 217 |
| BccI | CCATC | 1 cut(s) | 174 |
| BfaI | CTAG | 1 cut(s) | 51 |
| BglII | AGATCT | 1 cut(s) | 236 |
| Bme18I | GGWCC | 2 cut(s) | 93, 217 |
| BmgT120I | GGNCC | 2 cut(s) | 93, 217 |
| BmiI | GGNNCC | 2 cut(s) | 6, 106 |
| BpmI | CTGGAG | 1 cut(s) | 94 |
| BpuEI | CTTGAG | 2 cut(s) | 178, 196 |
| BsaWI | WCCGGW | 1 cut(s) | 101 |
| Bse118I | RCCGGY | 1 cut(s) | 151 |
| Bse1I | ACTGG | 1 cut(s) | 15 |
| BseGI | GGATG | 1 cut(s) | 171 |
| BseMII | CTCAG | 1 cut(s) | 248 |
| BseNI | ACTGG | 1 cut(s) | 15 |
| BseRI | GAGGAG | 1 cut(s) | 212 |
| BsiSI | CCGG | 4 cut(s) | 102, 108, 152, 232 |
| Bsp143I | GATC | 3 cut(s) | 146, 211, 236 |
| BspACI | CCGC | 2 cut(s) | 163, 209 |
| BspCNI | CTCAG | 1 cut(s) | 249 |
| BspLI | GGNNCC | 2 cut(s) | 6, 106 |
| BspPI | GGATC | 2 cut(s) | 154, 219 |
| BsrFI | RCCGGY | 1 cut(s) | 151 |
| BsrI | ACTGG | 1 cut(s) | 15 |
| BssAI | RCCGGY | 1 cut(s) | 151 |
| BssMI | GATC | 3 cut(s) | 146, 211, 236 |
| BstC8I | GCNNGC | 1 cut(s) | 229 |
| BstDEI | CTNAG | 1 cut(s) | 257 |
| BstF5I | GGATG | 1 cut(s) | 171 |
| BstKTI | GATC | 3 cut(s) | 149, 214, 239 |
| BstMBI | GATC | 3 cut(s) | 146, 211, 236 |
| BstX2I | RGATCY | 2 cut(s) | 211, 236 |
| BstYI | RGATCY | 2 cut(s) | 211, 236 |
| BtsCI | GGATG | 1 cut(s) | 171 |
| BtsIMutI | CAGTG | 1 cut(s) | 8 |
| Cac8I | GCNNGC | 1 cut(s) | 229 |
| Cfr10I | RCCGGY | 1 cut(s) | 151 |
| Cfr13I | GGNCC | 2 cut(s) | 93, 217 |
| CviJI | RGCY | 5 cut(s) | 7, 57, 191, 262, 277 |
| CviKI_1 | RGCY | 5 cut(s) | 7, 57, 191, 262, 277 |
| DdeI | CTNAG | 1 cut(s) | 257 |
| DpnI | GATC | 3 cut(s) | 148, 213, 238 |
| DpnII | GATC | 3 cut(s) | 146, 211, 236 |
| EciI | GGCGGA | 2 cut(s) | 178, 224 |
| Eco47I | GGWCC | 2 cut(s) | 93, 217 |
| Eco57I | CTGAAG | 1 cut(s) | 261 |
| FaiI | YATR | 1 cut(s) | 280 |
| FokI | GGATG | 1 cut(s) | 178 |
| FspBI | CTAG | 1 cut(s) | 51 |
| GsuI | CTGGAG | 1 cut(s) | 94 |
| HapII | CCGG | 4 cut(s) | 102, 108, 152, 232 |
| HinfI | GANTC | 3 cut(s) | 98, 125, 266 |
| HpaII | CCGG | 4 cut(s) | 102, 108, 152, 232 |
| Hpy188I | TCNGA | 3 cut(s) | 97, 130, 241 |
| Hpy188III | TCNNGA | 3 cut(s) | 73, 157, 175 |
| HpyF3I | CTNAG | 1 cut(s) | 257 |
| Kzo9I | GATC | 3 cut(s) | 146, 211, 236 |
| LmnI | GCTCC | 1 cut(s) | 4 |
| LpnPI | CCDG | 9 cut(s) | 45, 46, 58, 115, 121, 165, 181, 200, 245 |
| MaeI | CTAG | 1 cut(s) | 51 |
| MalI | GATC | 3 cut(s) | 148, 213, 238 |
| MboI | GATC | 3 cut(s) | 146, 211, 236 |
| MboII | GAAGA | 1 cut(s) | 134 |
| MflI | RGATCY | 2 cut(s) | 211, 236 |
| MluCI | AATT | 2 cut(s) | 68, 203 |
| MnlI | CCTC | 6 cut(s) | 47, 153, 230, 233, 252, 267 |
| MspI | CCGG | 4 cut(s) | 102, 108, 152, 232 |
| NdeII | GATC | 3 cut(s) | 146, 211, 236 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 106 |
| PfeI | GAWTC | 3 cut(s) | 98, 125, 266 |
| PflFI | GACNNNGTC | 1 cut(s) | 116 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 106 |
| PspPI | GGNCC | 2 cut(s) | 93, 217 |
| PsuI | RGATCY | 2 cut(s) | 211, 236 |
| PsyI | GACNNNGTC | 1 cut(s) | 116 |
| Sau3AI | GATC | 3 cut(s) | 146, 211, 236 |
| Sau96I | GGNCC | 2 cut(s) | 93, 217 |
| SetI | ASST | 3 cut(s) | 46, 120, 193 |
| SinI | GGWCC | 2 cut(s) | 93, 217 |
| SmlI | CTYRAG | 2 cut(s) | 157, 175 |
| SmoI | CTYRAG | 2 cut(s) | 157, 175 |
| Sse9I | AATT | 2 cut(s) | 68, 203 |
| SsiI | CCGC | 2 cut(s) | 163, 209 |
| SspMI | CTAG | 1 cut(s) | 51 |
| TaqI | TCGA | 2 cut(s) | 25, 120 |
| TasI | AATT | 2 cut(s) | 68, 203 |
| TfiI | GAWTC | 3 cut(s) | 98, 125, 266 |
| TscAI | CASTG | 1 cut(s) | 15 |
| TspRI | CASTG | 1 cut(s) | 15 |
| Tth111I | GACNNNGTC | 1 cut(s) | 116 |
| VpaK11BI | GGWCC | 2 cut(s) | 93, 217 |
| XspI | CTAG | 1 cut(s) | 51 |