Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0005654

Physical Location & Seq

Genomic Coordinates Forward (+)

375758 .. 382170

Gene Structure 6413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG002200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCGTTCCTGCGCAGTAGTGTCTCCAAGCTCCGTTCACGTCTCGGCCAGCAGTCTAGTCTCCGTGATTCCGTCAGATGGCTTCAAACGCAGACCTCCTCCGATCTCGACCTTCATTCTCAGTTGAAGGAATTGATTCCAGAACAACAGGAGCGTCTGAAGAAACTGAAGGCAGAGCATGGAAAAGTACAATTGGGCAATATCACTGTTGATATGGTGATTGGTGGAATGAGGGGAATGACGGGGTTGCTGTGGGAAACCTCTTTACTTGATCCGGATGAGGGCATTCGCTTTAGGGGTTTGTCAATTCCAGAATGCCAGAAAGTATTACCAGCTGCAAAGCCTGGTGGTGAACCTTTGCCCGAGGGCCTTCTCTGGCTACTTTTAACAGGAAAGGTACCAAGCAAGGAGCAAGTAGATGCATTATCCAGCGAATTGAGGAGTCGTGCCAAAGTTCCAGATTATGTGTTCAAGGCCATTGATGCTCTGCCTGTTGGAGCACATCCAATGACTCAATTTGCAACTGGTGTTATGGCGCTCCAGGTTAAGAGTGAATTCTCGAAGGCATATGACAAGGGAATACCAAAGTCAAAGTACTGGGAGCCAACTTATGAGGATTCACTTAGTCTGATTGCACAAGTGCCGGTGGTAGCTTCCTATGTGTATCGAAGGATATATAAGGATGGAAAAATAATACCCGTTGATGACTCTCTGGATTATGGTGCAAATTTTGCACATTTGTTAGGATTTGACGATCACAAAATGCAAGAGCTTATGAGGCTTTATGTCACCATCCATAGTGATCATGAAGGCGGGAATGTCAGTGCTCATACCGGCCATTTAGTTGCTAGTGCACTGTCAGATCCTTATCTTTCATTTGCAGCGGCATTAAATGGTTTAGCTGGTCCACTTCATGGTTTGGCTAATCAGGAAGTTTTGCTTTGGATAAAATCTGTGGTAGATGAATGTGGAGAGAACATAACTACAGAGCAGTTGAAGGACTATATATGGAAAACATTAAACAGTGGGAAGGTTGTTCCTGGTTTTGGCCATGGAGTTTTGCGTAAAACAGATCCACGATATACATGTCAGAGGGAGTTTGCATTGAAGCACATGCCTGATGATCCTCTGTTTCAGCTGGTGTCCAAGCTTTATGATGTTGTGCCTCCCATACTTACCGAACTAGGCAAGGTTAAAAATCCCTGGCCCAATGTAGATGCTCATAGTGGTGTACTGTTGAACCACTTCGGTTTGACTGAGGCAAGATATTTTACTGTTCTTTTTGGCGTCTCAAGGAGTATCGGGATTGGCTCTCAGTTGATATGGGACCGAGCTCTTGGTCTGCCTCTTGAAAGGCCCAAGAGTGTTACGATGGAGTCACTTGAAAGTTACTGCAAGAAAGCAGCTTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004108 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008144 GO:0008150 GO:0008152 GO:0008270 GO:0009060 GO:0009507 GO:0009536 GO:0009987 GO:0010035 GO:0010038 GO:0015980 GO:0016740 GO:0016746 GO:0016999 GO:0017076 GO:0017144 GO:0019752 GO:0030312 GO:0030554 GO:0031974 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0036440 GO:0042221 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045333 GO:0046686 GO:0046872 GO:0046912 GO:0046914 GO:0050896 GO:0055114 GO:0070013 GO:0071704 GO:0071944 GO:0072350 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00020 ko00630 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map00630 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Citrate_synt

Protein Analysis

470

Amino Acids

52.1

Weight (kDa)

7.24

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Citrate_synt	PF00285	76 - 454	1.2e-94	Citrate synthase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44350 AT2G44350 AT2G44350 AT2G44350 AT3G60100 AT3G60100 AT3G60100
fragaria_vesca	FvH4_7g00080 FvH4_7g00080 FvH4_7g00080
malus_domestica	MD00G1055300.v1.1 MD02G1319300.v1.1
prunus_persica	Prupe.2G002900_v2.0.a1 Prupe.2G002900_v2.0.a1
pyrus_communis	pycom07g00060
rosa_chinensis	RchiOBHm_Chr1g0313271
rosa_laevigata	RLG00000030810
rosa_multiflora	Rmu_sc0000035.1_g000001 Rmu_sc0004761.1_g000015
rosa_roxburghii	Rroxscaffold_4G00332290
rosa_rugosa	RorugPtG0002200 RorugPtG0002300.1 RorugPtG0002400.1
rosa_samantha	Rh1AG002300 Rh1CG004400 Rh1CG006800 Rh1DG002200
rosa_wichuraiana	Rw1G000130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	14
Acc65I	GGTACC	1 cut(s)	397
AccB1I	GGYRCC	1 cut(s)	397
AccB7I	CCANNNNNTGG	1 cut(s)	914
AccIII	TCCGGA	1 cut(s)	274
AciI	CCGC	2 cut(s)	813, 884
AclWI	GGATC	4 cut(s)	266, 857, 1067, 1118
AcoI	YGGCCR	3 cut(s)	46, 835, 1048
AcsI	RAATTY	2 cut(s)	554, 727
AcuI	CTGAAG	2 cut(s)	179, 188
AcyI	GRCGYC	1 cut(s)	1287
AfaI	GTAC	4 cut(s)	189, 399, 596, 1233
AfiI	CCNNNNNNNGG	4 cut(s)	78, 281, 914, 1046
AflIII	ACRYGT	1 cut(s)	1085
AgsI	TTSAA	8 cut(s)	86, 127, 472, 997, 1108, 1240, 1352, 1385
AjiI	CACGTC	1 cut(s)	41
AjnI	CCWGG	4 cut(s)	343, 540, 1039, 1202
AluBI	AGCT	9 cut(s)	31, 335, 653, 772, 902, 1138, 1150, 1334, 1406
AluI	AGCT	9 cut(s)	31, 335, 653, 772, 902, 1138, 1150, 1334, 1406
Alw21I	GWGCWC	4 cut(s)	502, 829, 856, 1336
Alw26I	GTCTC	4 cut(s)	28, 47, 65, 1294
Alw44I	GTGCAC	1 cut(s)	852
AlwI	GGATC	4 cut(s)	266, 857, 1067, 1118
Ama87I	CYCGRG	1 cut(s)	362
Aor13HI	TCCGGA	1 cut(s)	274
AoxI	GGCC	7 cut(s)	46, 367, 474, 835, 1048, 1205, 1355
ApaLI	GTGCAC	1 cut(s)	852
ApeKI	GCWGC	3 cut(s)	335, 881, 1403
ApoI	RAATTY	2 cut(s)	554, 727
Asp700I	GAANNNNTTC	2 cut(s)	135, 1244
Asp718I	GGTACC	1 cut(s)	397
AspLEI	GCGC	2 cut(s)	15, 538
AspS9I	GGNCC	5 cut(s)	367, 905, 1206, 1327, 1356
AsuHPI	GGTGA	3 cut(s)	229, 362, 781
AvaI	CYCGRG	1 cut(s)	362
AvaII	GGWCC	2 cut(s)	905, 1327
BaeGI	GKGCMC	1 cut(s)	856
BalI	TGGCCA	1 cut(s)	1050
BanI	GGYRCC	1 cut(s)	397
BanII	GRGCYC	1 cut(s)	1336
Bbv12I	GWGCWC	4 cut(s)	502, 829, 856, 1336
BbvI	GCAGC	2 cut(s)	322, 893
BccI	CCATC	4 cut(s)	72, 677, 800, 1366
BciT130I	CCWGG	4 cut(s)	345, 542, 1041, 1204
BclI	TGATCA	1 cut(s)	802
BcoDI	GTCTC	4 cut(s)	28, 47, 65, 1294
BfaI	CTAG	3 cut(s)	57, 849, 1184
BfmI	CTRYAG	1 cut(s)	984
BfoI	RGCGCY	1 cut(s)	539
BisI	GCNGC	4 cut(s)	336, 882, 885, 1404
BlsI	GCNGC	4 cut(s)	337, 883, 886, 1405
BmcAI	AGTACT	1 cut(s)	596
Bme1390I	CCNGG	4 cut(s)	345, 542, 1041, 1204
Bme18I	GGWCC	2 cut(s)	905, 1327
BmeT110I	CYCGRG	1 cut(s)	362
BmgBI	CACGTC	1 cut(s)	41
BmgT120I	GGNCC	5 cut(s)	367, 905, 1206, 1327, 1356
BmiI	GGNNCC	3 cut(s)	399, 603, 1328
BmrFI	CCNGG	4 cut(s)	345, 542, 1041, 1204
BmrI	ACTGGG	1 cut(s)	607
BmsI	GCATC	3 cut(s)	409, 472, 1207
BmuI	ACTGGG	1 cut(s)	607
BpmI	CTGGAG	1 cut(s)	524
BpuEI	CTTGAG	1 cut(s)	1276
BsaBI	GATNNNNATC	1 cut(s)	867
BsaHI	GRCGYC	1 cut(s)	1287
BsaJI	CCNNGG	3 cut(s)	363, 1051, 1202
BsaWI	WCCGGW	1 cut(s)	274
Bsc4I	CCNNNNNNNGG	4 cut(s)	78, 281, 914, 1046
Bse118I	RCCGGY	2 cut(s)	643, 833
Bse1I	ACTGG	2 cut(s)	529, 602
Bse8I	GATNNNNATC	1 cut(s)	867
BseAI	TCCGGA	1 cut(s)	274
BseBI	CCWGG	4 cut(s)	345, 542, 1041, 1204
BseDI	CCNNGG	3 cut(s)	363, 1051, 1202
BseGI	GGATG	4 cut(s)	283, 502, 688, 792
BseJI	GATNNNNATC	1 cut(s)	867
BseLI	CCNNNNNNNGG	4 cut(s)	78, 281, 914, 1046
BseMII	CTCAG	3 cut(s)	134, 1248, 1328
BseNI	ACTGG	2 cut(s)	529, 602
BseRI	GAGGAG	2 cut(s)	88, 454
BseSI	GKGCMC	1 cut(s)	856
BseXI	GCAGC	2 cut(s)	322, 893
BshFI	GGCC	7 cut(s)	48, 369, 476, 837, 1050, 1207, 1357
BshNI	GGYRCC	1 cut(s)	397
BsiHKAI	GWGCWC	4 cut(s)	502, 829, 856, 1336
BsiHKCI	CYCGRG	1 cut(s)	362
BsiSI	CCGG	3 cut(s)	275, 644, 834
BslFI	GGGAC	1 cut(s)	1340
BslI	CCNNNNNNNGG	4 cut(s)	78, 281, 914, 1046
BsmAI	GTCTC	4 cut(s)	28, 47, 65, 1294
BsmBI	CGTCTC	2 cut(s)	47, 1294
BsmFI	GGGAC	1 cut(s)	1340
BsmI	GAATGC	2 cut(s)	285, 320
BsnI	GGCC	7 cut(s)	48, 369, 476, 837, 1050, 1207, 1357
BsoBI	CYCGRG	1 cut(s)	362
Bsp1286I	GDGCHC	4 cut(s)	502, 829, 856, 1336
Bsp13I	TCCGGA	1 cut(s)	274
Bsp143I	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
Bsp19I	CCATGG	1 cut(s)	1051
BspACI	CCGC	2 cut(s)	813, 884
BspANI	GGCC	7 cut(s)	48, 369, 476, 837, 1050, 1207, 1357
BspCNI	CTCAG	3 cut(s)	133, 1249, 1327
BspEI	TCCGGA	1 cut(s)	274
BspHI	TCATGA	1 cut(s)	805
BspLI	GGNNCC	3 cut(s)	399, 603, 1328
BspPI	GGATC	4 cut(s)	266, 857, 1067, 1118
BspT107I	GGYRCC	1 cut(s)	397
BsrFI	RCCGGY	2 cut(s)	643, 833
BsrI	ACTGG	2 cut(s)	529, 602
BssAI	RCCGGY	2 cut(s)	643, 833
BssECI	CCNNGG	3 cut(s)	363, 1051, 1202
BssMI	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
BssNI	GRCGYC	1 cut(s)	1287
BssT1I	CCWWGG	1 cut(s)	1051
Bst2UI	CCWGG	4 cut(s)	345, 542, 1041, 1204
Bst4CI	ACNGT	5 cut(s)	208, 858, 1025, 1236, 1276
BstACI	GRCGYC	1 cut(s)	1287
BstAPI	GCANNNNNTGC	1 cut(s)	731
BstC8I	GCNNGC	1 cut(s)	50
BstDEI	CTNAG	4 cut(s)	120, 623, 1257, 1314
BstDSI	CCRYGG	1 cut(s)	1051
BstF5I	GGATG	4 cut(s)	283, 502, 688, 792
BstH2I	RGCGCY	1 cut(s)	539
BstHHI	GCGC	2 cut(s)	15, 538
BstKTI	GATC	7 cut(s)	106, 274, 757, 805, 865, 1075, 1126
BstMAI	GTCTC	4 cut(s)	28, 47, 65, 1294
BstMBI	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
BstMWI	GCNNNNNNNGC	4 cut(s)	88, 482, 731, 778
BstNI	CCWGG	4 cut(s)	345, 542, 1041, 1204
BstNSI	RCATGY	2 cut(s)	1089, 1117
BstSCI	CCNGG	4 cut(s)	343, 540, 1039, 1202
BstSFI	CTRYAG	1 cut(s)	984
BstSLI	GKGCMC	1 cut(s)	856
BstV1I	GCAGC	2 cut(s)	322, 893
BstX2I	RGATCY	2 cut(s)	862, 1072
BstYI	RGATCY	2 cut(s)	862, 1072
BsuRI	GGCC	7 cut(s)	48, 369, 476, 837, 1050, 1207, 1357
BtgI	CCRYGG	1 cut(s)	1051
BtrI	CACGTC	1 cut(s)	41
BtsCI	GGATG	4 cut(s)	283, 502, 688, 792
BtsIMutI	CAGTG	4 cut(s)	204, 829, 854, 1030
Cac8I	GCNNGC	1 cut(s)	50
CciI	TCATGA	1 cut(s)	805
CfoI	GCGC	2 cut(s)	15, 538
Cfr10I	RCCGGY	2 cut(s)	643, 833
Cfr13I	GGNCC	5 cut(s)	367, 905, 1206, 1327, 1356
CseI	GACGC	2 cut(s)	143, 1276
Csp6I	GTAC	4 cut(s)	188, 398, 595, 1232
CviAII	CATG	6 cut(s)	179, 806, 914, 1052, 1086, 1114
CviQI	GTAC	4 cut(s)	188, 398, 595, 1232
DdeI	CTNAG	4 cut(s)	120, 623, 1257, 1314
DpnI	GATC	7 cut(s)	105, 273, 756, 804, 864, 1074, 1125
DpnII	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
EaeI	YGGCCR	3 cut(s)	46, 835, 1048
Ecl136II	GAGCTC	1 cut(s)	1334
Eco130I	CCWWGG	1 cut(s)	1051
Eco24I	GRGCYC	1 cut(s)	1336
Eco47I	GGWCC	2 cut(s)	905, 1327
Eco53kI	GAGCTC	1 cut(s)	1334
Eco57I	CTGAAG	2 cut(s)	179, 188
Eco88I	CYCGRG	1 cut(s)	362
EcoICRI	GAGCTC	1 cut(s)	1334
EcoO109I	RGGNCCY	1 cut(s)	367
EcoRI	GAATTC	1 cut(s)	554
EcoRII	CCWGG	4 cut(s)	343, 540, 1039, 1202
EcoT14I	CCWWGG	1 cut(s)	1051
EcoT22I	ATGCAT	1 cut(s)	424
EcoT38I	GRGCYC	1 cut(s)	1336
ErhI	CCWWGG	1 cut(s)	1051
Esp3I	CGTCTC	2 cut(s)	47, 1294
FaeI	CATG	6 cut(s)	182, 809, 917, 1055, 1089, 1117
FalI	AAGNNNNNCTT	2 cut(s)	924, 956
FaqI	GGGAC	1 cut(s)	1340
FatI	CATG	6 cut(s)	178, 805, 913, 1051, 1085, 1113
FauI	CCCGC	1 cut(s)	806
FauNDI	CATATG	1 cut(s)	568
FbaI	TGATCA	1 cut(s)	802
Fnu4HI	GCNGC	4 cut(s)	336, 882, 885, 1404
FokI	GGATG	4 cut(s)	290, 489, 695, 779
FriOI	GRGCYC	1 cut(s)	1336
Fsp4HI	GCNGC	4 cut(s)	336, 882, 885, 1404
FspBI	CTAG	3 cut(s)	57, 849, 1184
FspI	TGCGCA	1 cut(s)	14
GlaI	GCGC	2 cut(s)	14, 537
GluI	GCNGC	4 cut(s)	336, 882, 885, 1404
GsuI	CTGGAG	1 cut(s)	524
HaeII	RGCGCY	1 cut(s)	539
HaeIII	GGCC	7 cut(s)	48, 369, 476, 837, 1050, 1207, 1357
HapII	CCGG	3 cut(s)	275, 644, 834
HgaI	GACGC	2 cut(s)	143, 1276
HhaI	GCGC	2 cut(s)	15, 538
Hin1I	GRCGYC	1 cut(s)	1287
Hin1II	CATG	6 cut(s)	182, 809, 917, 1055, 1089, 1117
Hin6I	GCGC	2 cut(s)	13, 536
HinP1I	GCGC	2 cut(s)	13, 536
HindIII	AAGCTT	1 cut(s)	1148
HinfI	GANTC	7 cut(s)	68, 136, 442, 511, 617, 707, 1376
HpaII	CCGG	3 cut(s)	275, 644, 834
HphI	GGTGA	3 cut(s)	229, 362, 781
Hpy166II	GTNNAC	5 cut(s)	38, 353, 854, 908, 1232
Hpy188I	TCNGA	6 cut(s)	77, 103, 159, 630, 862, 1092
Hpy8I	GTNNAC	5 cut(s)	38, 353, 854, 908, 1232
HpyAV	CCTTC	9 cut(s)	121, 122, 163, 380, 556, 663, 803, 991, 1024
HpyCH4III	ACNGT	5 cut(s)	208, 858, 1025, 1236, 1276
HpyCH4IV	ACGT	1 cut(s)	40
HpyF10VI	GCNNNNNNNGC	4 cut(s)	88, 482, 731, 778
HpyF3I	CTNAG	4 cut(s)	120, 623, 1257, 1314
HpySE526I	ACGT	1 cut(s)	40
Hsp92I	GRCGYC	1 cut(s)	1287
Hsp92II	CATG	6 cut(s)	182, 809, 917, 1055, 1089, 1117
HspAI	GCGC	2 cut(s)	13, 536
Kpn2I	TCCGGA	1 cut(s)	274
KpnI	GGTACC	1 cut(s)	401
Ksp22I	TGATCA	1 cut(s)	802
Kzo9I	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
LmnI	GCTCC	6 cut(s)	36, 151, 409, 497, 543, 601
Lsp1109I	GCAGC	2 cut(s)	322, 893
LweI	GCATC	3 cut(s)	409, 472, 1207
MaeI	CTAG	3 cut(s)	57, 849, 1184
MaeII	ACGT	1 cut(s)	40
MaeIII	GTNAC	4 cut(s)	787, 1366, 1377, 1388
MalI	GATC	7 cut(s)	105, 273, 756, 804, 864, 1074, 1125
MboI	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
MboII	GAAGA	1 cut(s)	172
MfeI	CAATTG	1 cut(s)	191
MflI	RGATCY	2 cut(s)	862, 1072
MhlI	GDGCHC	4 cut(s)	502, 829, 856, 1336
MlsI	TGGCCA	1 cut(s)	1050
MluCI	AATT	7 cut(s)	131, 191, 306, 434, 515, 554, 727
MluNI	TGGCCA	1 cut(s)	1050
MlyI	GAGTC	4 cut(s)	451, 505, 701, 1385
MmeI	TCCRAC	1 cut(s)	475
Mox20I	TGGCCA	1 cut(s)	1050
Mph1103I	ATGCAT	1 cut(s)	424
MroI	TCCGGA	1 cut(s)	274
MroXI	GAANNNNTTC	2 cut(s)	135, 1244
MscI	TGGCCA	1 cut(s)	1050
MseI	TTAA	5 cut(s)	386, 546, 890, 1019, 1194
MslI	CAYNNNNRTG	1 cut(s)	1227
Msp20I	TGGCCA	1 cut(s)	1050
MspA1I	CMGCKG	3 cut(s)	335, 884, 1138
MspI	CCGG	3 cut(s)	275, 644, 834
MspR9I	CCNGG	4 cut(s)	345, 542, 1041, 1204
MunI	CAATTG	1 cut(s)	191
Mva1269I	GAATGC	2 cut(s)	285, 320
MvaI	CCWGG	4 cut(s)	345, 542, 1041, 1204
MwoI	GCNNNNNNNGC	4 cut(s)	88, 482, 731, 778
NcoI	CCATGG	1 cut(s)	1051
NdeI	CATATG	1 cut(s)	568
NdeII	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
NlaIII	CATG	6 cut(s)	182, 809, 917, 1055, 1089, 1117
NlaIV	GGNNCC	3 cut(s)	399, 603, 1328
NmeAIII	GCCGAG	1 cut(s)	24
NmuCI	GTSAC	2 cut(s)	787, 1377
NsbI	TGCGCA	1 cut(s)	14
NsiI	ATGCAT	1 cut(s)	424
NspI	RCATGY	2 cut(s)	1089, 1117
PagI	TCATGA	1 cut(s)	805
PciI	ACATGT	1 cut(s)	1085
PctI	GAATGC	2 cut(s)	285, 320
PdmI	GAANNNNTTC	2 cut(s)	135, 1244
PfeI	GAWTC	3 cut(s)	68, 136, 617
PflMI	CCANNNNNTGG	1 cut(s)	914
PkrI	GCNGC	4 cut(s)	337, 883, 886, 1405
PleI	GAGTC	4 cut(s)	450, 505, 701, 1384
PpsI	GAGTC	4 cut(s)	450, 505, 701, 1384
PscI	ACATGT	1 cut(s)	1085
Psp124BI	GAGCTC	1 cut(s)	1336
Psp6I	CCWGG	4 cut(s)	343, 540, 1039, 1202
PspGI	CCWGG	4 cut(s)	343, 540, 1039, 1202
PspN4I	GGNNCC	3 cut(s)	399, 603, 1328
PspPI	GGNCC	5 cut(s)	367, 905, 1206, 1327, 1356
PsuI	RGATCY	2 cut(s)	862, 1072
PvuII	CAGCTG	2 cut(s)	335, 1138
RsaI	GTAC	4 cut(s)	189, 399, 596, 1233
RsaNI	GTAC	4 cut(s)	188, 398, 595, 1232
RseI	CAYNNNNRTG	1 cut(s)	1227
SacI	GAGCTC	1 cut(s)	1336
SaqAI	TTAA	5 cut(s)	386, 546, 890, 1019, 1194
SatI	GCNGC	4 cut(s)	336, 882, 885, 1404
Sau3AI	GATC	7 cut(s)	103, 271, 754, 802, 862, 1072, 1123
Sau96I	GGNCC	5 cut(s)	367, 905, 1206, 1327, 1356
ScaI	AGTACT	1 cut(s)	596
SchI	GAGTC	4 cut(s)	451, 505, 701, 1385
ScrFI	CCNGG	4 cut(s)	345, 542, 1041, 1204
SduI	GDGCHC	4 cut(s)	502, 829, 856, 1336
SfaNI	GCATC	3 cut(s)	409, 472, 1207
SfcI	CTRYAG	1 cut(s)	984
SinI	GGWCC	2 cut(s)	905, 1327
SmiMI	CAYNNNNRTG	1 cut(s)	1227
SmlI	CTYRAG	1 cut(s)	1291
SmoI	CTYRAG	1 cut(s)	1291
Sse9I	AATT	7 cut(s)	131, 191, 306, 434, 515, 554, 727
SsiI	CCGC	2 cut(s)	813, 884
SspMI	CTAG	3 cut(s)	57, 849, 1184
SstI	GAGCTC	1 cut(s)	1336
StyD4I	CCNGG	4 cut(s)	343, 540, 1039, 1202
StyI	CCWWGG	1 cut(s)	1051
TaaI	ACNGT	5 cut(s)	208, 858, 1025, 1236, 1276
TaiI	ACGT	1 cut(s)	43
TaqI	TCGA	3 cut(s)	108, 560, 667
TaqII	GACCGA	1 cut(s)	1344
TasI	AATT	7 cut(s)	131, 191, 306, 434, 515, 554, 727
TatI	WGTACW	3 cut(s)	187, 594, 1231
TauI	GCSGC	1 cut(s)	887
TfiI	GAWTC	3 cut(s)	68, 136, 617
Tru1I	TTAA	5 cut(s)	386, 546, 890, 1019, 1194
Tru9I	TTAA	5 cut(s)	386, 546, 890, 1019, 1194
TscAI	CASTG	4 cut(s)	211, 829, 861, 1030
TseFI	GTSAC	2 cut(s)	787, 1377
TseI	GCWGC	3 cut(s)	335, 881, 1403
Tsp45I	GTSAC	2 cut(s)	787, 1377
TspDTI	ATGAA	5 cut(s)	104, 822, 864, 902, 978
TspGWI	ACGGA	3 cut(s)	23, 53, 61
TspRI	CASTG	4 cut(s)	211, 829, 861, 1030
Van91I	CCANNNNNTGG	1 cut(s)	914
VneI	GTGCAC	1 cut(s)	852
VpaK11BI	GGWCC	2 cut(s)	905, 1327
XapI	RAATTY	2 cut(s)	554, 727
XceI	RCATGY	2 cut(s)	1089, 1117
XmnI	GAANNNNTTC	2 cut(s)	135, 1244
XspI	CTAG	3 cut(s)	57, 849, 1184
ZrmI	AGTACT	1 cut(s)	596
Zsp2I	ATGCAT	1 cut(s)	424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.