transfer
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000002257 |
| rosa_multiflora | Rmu_sc0003413.1_g000038 Rmu_sc0042630.1_g000001 |
| rosa_samantha | Rh1DG161700 Rh2AG291800 Rh2BG206400 Rh4BG265000 Rh4CG087500 Rh4DG297600 Rh5BG507400 Rh5CG290400 Rh5CG531000 Rh6DG200600 Rh7BG411000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 17, 125 |
| AgsI | TTSAA | 2 cut(s) | 43, 134 |
| AluBI | AGCT | 2 cut(s) | 49, 149 |
| AluI | AGCT | 2 cut(s) | 49, 149 |
| Alw26I | GTCTC | 2 cut(s) | 65, 124 |
| ApeKI | GCWGC | 1 cut(s) | 56 |
| AspLEI | GCGC | 1 cut(s) | 94 |
| BaeGI | GKGCMC | 1 cut(s) | 144 |
| BbvCI | CCTCAGC | 1 cut(s) | 20 |
| BbvI | GCAGC | 1 cut(s) | 68 |
| BccI | CCATC | 1 cut(s) | 131 |
| BceAI | ACGGC | 1 cut(s) | 44 |
| BcoDI | GTCTC | 2 cut(s) | 65, 124 |
| BisI | GCNGC | 3 cut(s) | 17, 57, 125 |
| BlsI | GCNGC | 3 cut(s) | 18, 58, 126 |
| BpmI | CTGGAG | 1 cut(s) | 71 |
| Bpu10I | CCTNAGC | 1 cut(s) | 20 |
| BsaI | GGTCTC | 1 cut(s) | 65 |
| Bse118I | RCCGGY | 1 cut(s) | 74 |
| BseMII | CTCAG | 1 cut(s) | 11 |
| BseSI | GKGCMC | 1 cut(s) | 144 |
| BseXI | GCAGC | 1 cut(s) | 68 |
| BsiSI | CCGG | 1 cut(s) | 75 |
| BsmAI | GTCTC | 2 cut(s) | 65, 124 |
| BsmBI | CGTCTC | 1 cut(s) | 124 |
| BsmI | GAATGC | 1 cut(s) | 38 |
| Bso31I | GGTCTC | 1 cut(s) | 65 |
| Bsp1286I | GDGCHC | 1 cut(s) | 144 |
| Bsp143I | GATC | 1 cut(s) | 96 |
| BspACI | CCGC | 2 cut(s) | 17, 125 |
| BspCNI | CTCAG | 1 cut(s) | 12 |
| BspTNI | GGTCTC | 1 cut(s) | 65 |
| BsrFI | RCCGGY | 1 cut(s) | 74 |
| BssAI | RCCGGY | 1 cut(s) | 74 |
| BssMI | GATC | 1 cut(s) | 96 |
| BstC8I | GCNNGC | 1 cut(s) | 105 |
| BstDEI | CTNAG | 1 cut(s) | 20 |
| BstHHI | GCGC | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 99 |
| BstMAI | GTCTC | 2 cut(s) | 65, 124 |
| BstMBI | GATC | 1 cut(s) | 96 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 100 |
| BstSLI | GKGCMC | 1 cut(s) | 144 |
| BstV1I | GCAGC | 1 cut(s) | 68 |
| Cac8I | GCNNGC | 1 cut(s) | 105 |
| CfoI | GCGC | 1 cut(s) | 94 |
| Cfr10I | RCCGGY | 1 cut(s) | 74 |
| CviJI | RGCY | 4 cut(s) | 16, 49, 59, 149 |
| CviKI_1 | RGCY | 4 cut(s) | 16, 49, 59, 149 |
| DdeI | CTNAG | 1 cut(s) | 20 |
| DpnI | GATC | 1 cut(s) | 98 |
| DpnII | GATC | 1 cut(s) | 96 |
| Eco31I | GGTCTC | 1 cut(s) | 65 |
| Esp3I | CGTCTC | 1 cut(s) | 124 |
| Fnu4HI | GCNGC | 3 cut(s) | 17, 57, 125 |
| Fsp4HI | GCNGC | 3 cut(s) | 17, 57, 125 |
| GlaI | GCGC | 1 cut(s) | 93 |
| GluI | GCNGC | 3 cut(s) | 17, 57, 125 |
| GsuI | CTGGAG | 1 cut(s) | 71 |
| HapII | CCGG | 1 cut(s) | 75 |
| HhaI | GCGC | 1 cut(s) | 94 |
| Hin6I | GCGC | 1 cut(s) | 92 |
| HinP1I | GCGC | 1 cut(s) | 92 |
| HpaII | CCGG | 1 cut(s) | 75 |
| Hpy188I | TCNGA | 1 cut(s) | 70 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 1 cut(s) | 32 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 100 |
| HpyF3I | CTNAG | 1 cut(s) | 20 |
| HspAI | GCGC | 1 cut(s) | 92 |
| Kzo9I | GATC | 1 cut(s) | 96 |
| LmnI | GCTCC | 2 cut(s) | 46, 146 |
| LpnPI | CCDG | 3 cut(s) | 35, 88, 89 |
| Lsp1109I | GCAGC | 1 cut(s) | 68 |
| MalI | GATC | 1 cut(s) | 98 |
| MboI | GATC | 1 cut(s) | 96 |
| MhlI | GDGCHC | 1 cut(s) | 144 |
| MluCI | AATT | 1 cut(s) | 27 |
| MnlI | CCTC | 4 cut(s) | 15, 28, 46, 79 |
| MspA1I | CMGCKG | 2 cut(s) | 19, 127 |
| MspI | CCGG | 1 cut(s) | 75 |
| Mva1269I | GAATGC | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 100 |
| NdeII | GATC | 1 cut(s) | 96 |
| PctI | GAATGC | 1 cut(s) | 38 |
| PkrI | GCNGC | 3 cut(s) | 18, 58, 126 |
| SatI | GCNGC | 3 cut(s) | 17, 57, 125 |
| Sau3AI | GATC | 1 cut(s) | 96 |
| SduI | GDGCHC | 1 cut(s) | 144 |
| SetI | ASST | 3 cut(s) | 51, 90, 151 |
| Sse9I | AATT | 1 cut(s) | 27 |
| SsiI | CCGC | 2 cut(s) | 17, 125 |
| TasI | AATT | 1 cut(s) | 27 |
| TauI | GCSGC | 2 cut(s) | 19, 127 |
| TseI | GCWGC | 1 cut(s) | 56 |