Rh1DG176400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
36064100 .. 36064555
456 bp
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UTR
Exon/CDS
Intron
Rh1DG176400.1

Sequence Viewer

Length: 153 bp
ATGGAACTGAACAGACAGAAAATACCACCATTCAGGAGCGTTTTTCAAGCAGTGGTAAAGTTGTTCCCAATTAGACTCAGGTGGCTCTTACCTAGTTTATTGTGTGCTTATAAAATTTTCCTTCCTTTTACGATATCCCCAACTGGAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

50

Amino Acids

5.86

Weight (kDa)

11.01

Isoelectric Point (pI)

66.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018182)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 111
AcsI RAATTY 1 cut(s) 114
AgsI TTSAA 1 cut(s) 47
ApoI RAATTY 1 cut(s) 114
BfaI CTAG 1 cut(s) 93
Bse1I ACTGG 1 cut(s) 148
BseMII CTCAG 1 cut(s) 91
BseNI ACTGG 1 cut(s) 148
BspCNI CTCAG 1 cut(s) 90
BsrI ACTGG 1 cut(s) 148
BstDEI CTNAG 1 cut(s) 77
BtsI GCAGTG 1 cut(s) 57
BtsIMutI CAGTG 1 cut(s) 57
CviJI RGCY 1 cut(s) 85
CviKI_1 RGCY 1 cut(s) 85
DdeI CTNAG 1 cut(s) 77
Eco32I GATATC 1 cut(s) 135
EcoRV GATATC 1 cut(s) 135
FaiI YATR 1 cut(s) 111
FspBI CTAG 1 cut(s) 93
HinfI GANTC 1 cut(s) 75
Hpy188III TCNNGA 1 cut(s) 34
HpyAV CCTTC 1 cut(s) 131
HpyF3I CTNAG 1 cut(s) 77
LmnI GCTCC 1 cut(s) 36
LpnPI CCDG 3 cut(s) 19, 64, 129
MaeI CTAG 1 cut(s) 93
MluCI AATT 3 cut(s) 69, 114, 148
MlyI GAGTC 1 cut(s) 69
MseI TTAA 1 cut(s) 151
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
PsiI TTATAA 1 cut(s) 111
SaqAI TTAA 1 cut(s) 151
SchI GAGTC 1 cut(s) 69
SetI ASST 2 cut(s) 83, 94
SgeI CNNG 4 cut(s) 46, 59, 91, 105
Sse9I AATT 3 cut(s) 69, 114, 148
SspMI CTAG 1 cut(s) 93
TasI AATT 3 cut(s) 69, 114, 148
Tru1I TTAA 1 cut(s) 151
Tru9I TTAA 1 cut(s) 151
TscAI CASTG 1 cut(s) 57
TspRI CASTG 1 cut(s) 57
XapI RAATTY 1 cut(s) 114
XspI CTAG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.