No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0394081 RchiOBHm_Chr7g0228251 |
| rosa_laevigata | RLG00000001511 |
| rosa_roxburghii | Rroxscaffold_2G00102710 Rroxscaffold_3G00230330 |
| rosa_rugosa | Rorug07G0247300 |
| rosa_samantha | Rh1DG176400 Rh7CG427600 |
| rosa_wichuraiana | Rw2G028650 Rw7G033350 Rw7G033940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 155 |
| AciI | CCGC | 2 cut(s) | 155, 168 |
| AfaI | GTAC | 1 cut(s) | 162 |
| AflIII | ACRYGT | 1 cut(s) | 276 |
| AgsI | TTSAA | 1 cut(s) | 92 |
| AjnI | CCWGG | 2 cut(s) | 66, 255 |
| AluBI | AGCT | 1 cut(s) | 95 |
| AluI | AGCT | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 2 cut(s) | 240, 258 |
| BccI | CCATC | 2 cut(s) | 136, 259 |
| BciT130I | CCWGG | 2 cut(s) | 68, 257 |
| Bme1390I | CCNGG | 2 cut(s) | 68, 257 |
| BmrFI | CCNGG | 2 cut(s) | 68, 257 |
| BsaJI | CCNNGG | 1 cut(s) | 255 |
| Bse118I | RCCGGY | 1 cut(s) | 188 |
| BseBI | CCWGG | 2 cut(s) | 68, 257 |
| BseDI | CCNNGG | 1 cut(s) | 255 |
| BseGI | GGATG | 3 cut(s) | 147, 220, 251 |
| Bsh1285I | CGRYCG | 1 cut(s) | 159 |
| BsiEI | CGRYCG | 1 cut(s) | 159 |
| BsiSI | CCGG | 1 cut(s) | 189 |
| BspACI | CCGC | 2 cut(s) | 155, 168 |
| BsrBI | CCGCTC | 1 cut(s) | 155 |
| BsrFI | RCCGGY | 1 cut(s) | 188 |
| BssAI | RCCGGY | 1 cut(s) | 188 |
| BssECI | CCNNGG | 1 cut(s) | 255 |
| Bst2UI | CCWGG | 2 cut(s) | 68, 257 |
| BstF5I | GGATG | 3 cut(s) | 147, 220, 251 |
| BstMCI | CGRYCG | 1 cut(s) | 159 |
| BstNI | CCWGG | 2 cut(s) | 68, 257 |
| BstNSI | RCATGY | 1 cut(s) | 280 |
| BstSCI | CCNGG | 2 cut(s) | 66, 255 |
| BtsCI | GGATG | 3 cut(s) | 147, 220, 251 |
| Cfr10I | RCCGGY | 1 cut(s) | 188 |
| Csp6I | GTAC | 1 cut(s) | 161 |
| CviAII | CATG | 1 cut(s) | 277 |
| CviJI | RGCY | 5 cut(s) | 16, 40, 71, 95, 188 |
| CviKI_1 | RGCY | 5 cut(s) | 16, 40, 71, 95, 188 |
| CviQI | GTAC | 1 cut(s) | 161 |
| Eco32I | GATATC | 1 cut(s) | 262 |
| EcoRII | CCWGG | 2 cut(s) | 66, 255 |
| EcoRV | GATATC | 1 cut(s) | 262 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 8 cut(s) | 12, 21, 50, 56, 80, 99, 134, 278 |
| FatI | CATG | 1 cut(s) | 276 |
| FokI | GGATG | 3 cut(s) | 154, 207, 238 |
| HapII | CCGG | 1 cut(s) | 189 |
| Hin1II | CATG | 1 cut(s) | 280 |
| HindIII | AAGCTT | 1 cut(s) | 93 |
| HpaII | CCGG | 1 cut(s) | 189 |
| HphI | GGTGA | 2 cut(s) | 240, 258 |
| Hpy166II | GTNNAC | 2 cut(s) | 163, 218 |
| Hpy188I | TCNGA | 1 cut(s) | 205 |
| Hpy188III | TCNNGA | 1 cut(s) | 115 |
| Hpy8I | GTNNAC | 2 cut(s) | 163, 218 |
| HpyCH4V | TGCA | 1 cut(s) | 181 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| LpnPI | CCDG | 5 cut(s) | 53, 80, 202, 242, 269 |
| MbiI | CCGCTC | 1 cut(s) | 155 |
| MnlI | CCTC | 2 cut(s) | 30, 234 |
| MseI | TTAA | 2 cut(s) | 42, 123 |
| MspI | CCGG | 1 cut(s) | 189 |
| MspR9I | CCNGG | 2 cut(s) | 68, 257 |
| MvaI | CCWGG | 2 cut(s) | 68, 257 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NspI | RCATGY | 1 cut(s) | 280 |
| PciI | ACATGT | 1 cut(s) | 276 |
| PscI | ACATGT | 1 cut(s) | 276 |
| Psp6I | CCWGG | 2 cut(s) | 66, 255 |
| PspGI | CCWGG | 2 cut(s) | 66, 255 |
| RsaI | GTAC | 1 cut(s) | 162 |
| RsaNI | GTAC | 1 cut(s) | 161 |
| SaqAI | TTAA | 2 cut(s) | 42, 123 |
| ScrFI | CCNGG | 2 cut(s) | 68, 257 |
| SetI | ASST | 2 cut(s) | 97, 139 |
| SsiI | CCGC | 2 cut(s) | 155, 168 |
| StyD4I | CCNGG | 2 cut(s) | 66, 255 |
| TaqI | TCGA | 1 cut(s) | 151 |
| Tru1I | TTAA | 2 cut(s) | 42, 123 |
| Tru9I | TTAA | 2 cut(s) | 42, 123 |
| TspDTI | ATGAA | 1 cut(s) | 95 |
| XceI | RCATGY | 1 cut(s) | 280 |