RNA polymerase I-specific transcription initiation factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0096821 RchiOBHm_Chr2g0096831 |
| rosa_samantha | Rh2AG108700 Rh2BG110700 Rh2CG112600 Rh2CG112700 Rh2DG112000 |
| rosa_wichuraiana | Rw2G008400 Rw2G008410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 46 |
| AcsI | RAATTY | 1 cut(s) | 119 |
| AgsI | TTSAA | 2 cut(s) | 68, 112 |
| AjnI | CCWGG | 1 cut(s) | 126 |
| AluBI | AGCT | 2 cut(s) | 15, 176 |
| AluI | AGCT | 2 cut(s) | 15, 176 |
| AoxI | GGCC | 1 cut(s) | 46 |
| ApeKI | GCWGC | 1 cut(s) | 173 |
| ApoI | RAATTY | 1 cut(s) | 119 |
| BbsI | GAAGAC | 1 cut(s) | 32 |
| BciT130I | CCWGG | 1 cut(s) | 128 |
| BfaI | CTAG | 1 cut(s) | 158 |
| BisI | GCNGC | 1 cut(s) | 174 |
| BlsI | GCNGC | 1 cut(s) | 175 |
| Bme1390I | CCNGG | 1 cut(s) | 128 |
| BmrFI | CCNGG | 1 cut(s) | 128 |
| BmsI | GCATC | 1 cut(s) | 140 |
| BpiI | GAAGAC | 1 cut(s) | 32 |
| BpuEI | CTTGAG | 1 cut(s) | 62 |
| BseBI | CCWGG | 1 cut(s) | 128 |
| BshFI | GGCC | 1 cut(s) | 48 |
| BsmI | GAATGC | 2 cut(s) | 107, 175 |
| BsnI | GGCC | 1 cut(s) | 48 |
| BspANI | GGCC | 1 cut(s) | 48 |
| Bst2UI | CCWGG | 1 cut(s) | 128 |
| BstNI | CCWGG | 1 cut(s) | 128 |
| BstSCI | CCNGG | 1 cut(s) | 126 |
| BstV2I | GAAGAC | 1 cut(s) | 32 |
| BsuRI | GGCC | 1 cut(s) | 48 |
| BtgZI | GCGATG | 1 cut(s) | 117 |
| CviJI | RGCY | 3 cut(s) | 15, 48, 176 |
| CviKI_1 | RGCY | 3 cut(s) | 15, 48, 176 |
| EaeI | YGGCCR | 1 cut(s) | 46 |
| EcoRII | CCWGG | 1 cut(s) | 126 |
| Fnu4HI | GCNGC | 1 cut(s) | 174 |
| Fsp4HI | GCNGC | 1 cut(s) | 174 |
| FspBI | CTAG | 1 cut(s) | 158 |
| GluI | GCNGC | 1 cut(s) | 174 |
| HaeIII | GGCC | 1 cut(s) | 48 |
| HpyAV | CCTTC | 2 cut(s) | 142, 147 |
| HpyCH4V | TGCA | 2 cut(s) | 107, 173 |
| LpnPI | CCDG | 4 cut(s) | 33, 113, 140, 162 |
| LweI | GCATC | 1 cut(s) | 140 |
| MaeI | CTAG | 1 cut(s) | 158 |
| MboII | GAAGA | 2 cut(s) | 37, 103 |
| MluCI | AATT | 1 cut(s) | 119 |
| MnlI | CCTC | 1 cut(s) | 52 |
| MseI | TTAA | 2 cut(s) | 87, 181 |
| MspA1I | CMGCKG | 1 cut(s) | 176 |
| MspR9I | CCNGG | 1 cut(s) | 128 |
| Mva1269I | GAATGC | 2 cut(s) | 107, 175 |
| MvaI | CCWGG | 1 cut(s) | 128 |
| PctI | GAATGC | 2 cut(s) | 107, 175 |
| PkrI | GCNGC | 1 cut(s) | 175 |
| Psp6I | CCWGG | 1 cut(s) | 126 |
| PspGI | CCWGG | 1 cut(s) | 126 |
| PvuII | CAGCTG | 1 cut(s) | 176 |
| SaqAI | TTAA | 2 cut(s) | 87, 181 |
| SatI | GCNGC | 1 cut(s) | 174 |
| ScrFI | CCNGG | 1 cut(s) | 128 |
| SetI | ASST | 3 cut(s) | 17, 63, 178 |
| SfaNI | GCATC | 1 cut(s) | 140 |
| SgeI | CNNG | 7 cut(s) | 32, 91, 124, 139, 140, 170, 176 |
| SmlI | CTYRAG | 1 cut(s) | 77 |
| SmoI | CTYRAG | 1 cut(s) | 77 |
| Sse9I | AATT | 1 cut(s) | 119 |
| SspMI | CTAG | 1 cut(s) | 158 |
| StyD4I | CCNGG | 1 cut(s) | 126 |
| TasI | AATT | 1 cut(s) | 119 |
| Tru1I | TTAA | 2 cut(s) | 87, 181 |
| Tru9I | TTAA | 2 cut(s) | 87, 181 |
| TseI | GCWGC | 1 cut(s) | 173 |
| TspGWI | ACGGA | 1 cut(s) | 130 |
| XapI | RAATTY | 1 cut(s) | 119 |
| XspI | CTAG | 1 cut(s) | 158 |