Rh2CG112600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
9924283 .. 9924582
300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG112600.1

Sequence Viewer

Length: 300 bp
ATGCTAGAACTCCTCTGCTGTATTCTGGCATTGTTTGATATGCTAGAGAAACCTATGTGCTCGTTCTGGGCGAGACCCTTATATCTGATGGACTTTGCACAGATTTTTTTTTTATACAATAAACTCATCCGACCTTCCTTGATTGCACAGCAGGAATACAAGCTTTCTGTATGGCAGTTGGGTTCCAAGCCTGTATATCAGTTTCATAATCAGGGGATGGAGTCTCAACTCATTTCATGCATAATATTCATGTTCATCAAAAGGTTCTACTTCAATTCCATTTTACCATTGCCTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

99

Amino Acids

11.84

Weight (kDa)

8.4

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018982)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 274
AluBI AGCT 1 cut(s) 163
AluI AGCT 1 cut(s) 163
Alw21I GWGCWC 1 cut(s) 62
Alw26I GTCTC 2 cut(s) 67, 228
Bbv12I GWGCWC 1 cut(s) 62
BccI CCATC 2 cut(s) 82, 211
BcoDI GTCTC 2 cut(s) 67, 228
BfaI CTAG 2 cut(s) 5, 44
BmiI GGNNCC 1 cut(s) 184
BsaI GGTCTC 1 cut(s) 67
Bse3DI GCAATG 1 cut(s) 287
BseGI GGATG 2 cut(s) 126, 222
BseMI GCAATG 1 cut(s) 287
BsiHKAI GWGCWC 1 cut(s) 62
BsmAI GTCTC 2 cut(s) 67, 228
Bso31I GGTCTC 1 cut(s) 67
Bsp1286I GDGCHC 1 cut(s) 62
BspLI GGNNCC 1 cut(s) 184
BspTNI GGTCTC 1 cut(s) 67
BsrDI GCAATG 1 cut(s) 287
BstF5I GGATG 2 cut(s) 126, 222
BstMAI GTCTC 2 cut(s) 67, 228
BtsCI GGATG 2 cut(s) 126, 222
CviAII CATG 2 cut(s) 237, 250
CviJI RGCY 2 cut(s) 163, 190
CviKI_1 RGCY 2 cut(s) 163, 190
Eco31I GGTCTC 1 cut(s) 67
EcoT22I ATGCAT 1 cut(s) 242
FaeI CATG 2 cut(s) 240, 253
FatI CATG 2 cut(s) 236, 249
FokI GGATG 2 cut(s) 113, 229
FspBI CTAG 2 cut(s) 5, 44
Hin1II CATG 2 cut(s) 240, 253
HindIII AAGCTT 1 cut(s) 161
HinfI GANTC 1 cut(s) 221
Hpy188I TCNGA 2 cut(s) 87, 131
HpyAV CCTTC 1 cut(s) 144
HpyCH4V TGCA 3 cut(s) 98, 146, 240
Hsp92II CATG 2 cut(s) 240, 253
LpnPI CCDG 5 cut(s) 11, 52, 137, 197, 204
MaeI CTAG 2 cut(s) 5, 44
MhlI GDGCHC 1 cut(s) 62
MluCI AATT 1 cut(s) 274
MlyI GAGTC 1 cut(s) 230
MmeI TCCRAC 1 cut(s) 154
MnlI CCTC 1 cut(s) 23
Mph1103I ATGCAT 1 cut(s) 242
NlaIII CATG 2 cut(s) 240, 253
NlaIV GGNNCC 1 cut(s) 184
NsiI ATGCAT 1 cut(s) 242
PcsI WCGNNNNNNNCGW 1 cut(s) 68
PleI GAGTC 1 cut(s) 229
PpsI GAGTC 1 cut(s) 229
PspN4I GGNNCC 1 cut(s) 184
SchI GAGTC 1 cut(s) 230
SduI GDGCHC 1 cut(s) 62
SetI ASST 4 cut(s) 55, 136, 165, 266
Sse9I AATT 1 cut(s) 274
SspI AATATT 1 cut(s) 246
SspMI CTAG 2 cut(s) 5, 44
TasI AATT 1 cut(s) 274
TspDTI ATGAA 4 cut(s) 194, 225, 238, 244
XspI CTAG 2 cut(s) 5, 44
Zsp2I ATGCAT 1 cut(s) 242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.