Rh2BG007700
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0012205
Physical Location & Seq
Forward (+)
554263 .. 557330
3068 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG007700.1

Sequence Viewer

Length: 2988 bp
ATGGGTTTTCTTCGTCATGATAGAACTTTCATGTTCAATTTTCTCTGTTTGATCATCATTTTCTTGGCTGCTGCGGTGTTTTCGAGCCAAGAAAATGTTCATCAAGCAATGAGAGACAAGGCATCGTTGCTTTCATTCATGTCCGGGATTGTTTCAGACCCTCACCATGCTCTAGAGGACTGGAATTCTAATTTGGACGATGTTCATTTTTGTAATTGGACTGGCATCAGATGCAACAATGCCAGAGACCAAGTTGTGGAGCTTGATCTTAGTAGAAAGTCCTTAAGAGGCACTATTTCACCAGCTCTCTCTAATCTTTCTTCTTTAACCATTCTTGATTTGTCAAGCAACTTCTTTGAAGGTCACATTCCAAGAGAGTTAGGCTCTCTTTCTCGGCTCACACAACTCAGCTTGTCTTCAAATCTTCTTGAAGGAAACATTGCAGCTGAGCTTGGTTTCCTTCACAGATTGGTGTATCTTGATTTGGGAAGCAACCGGCTGGAGGGAGAAATTCCAATGCCGCTTTTCTGCAATCACTCTTCTAATTCTCTGCAGTACATAGACTTGTCTAACAATTCTATAAGCGGCAAAATTCCTTTAATACATGGATGTGAGATGAAAAAACTGAGGTTTCTTCTACTTTGGTCCAATCATCTAGTTGGACAGGTTCCTGCAGCACTTTCAAACTCCTCGAAACTAGAATGGCTCGACTTAGAATCCAACATGCTAAGCGGGGAGCTCCCATCGGAGATTGTAGCCAGAATGCCAAAGTTGCAGTACCTCTACTTGTCCTACAATGACTTTGTGAGCCATGACGGTAACACTAACCTTGAACCTTTTTTAACCTCTTTACTTAATGCCTCTAACTTTCAAGAGCTTGAATTAGCTGGGAATAATCTTGGGGGAGAGATACCGCCAATTATTGGTGATCTTTCGACCAATCTTGTAGAAGTTCATTTAGATAGTAATCTTCTTTATGGTTCAATCCCTCCTCACATTTCAAACCTTGTCAACCTCACCCTCTTGAACTTGTCTAGTAACCATTTGAATGGAACCATCCCACCCAAACTATGCCTAATGAGAAAGCTGGAACGGGTATATCTCTCGAACAATTCACTCTCTGGTGAAATTCCATCTGAACTGGGCGGCATTTCCCATCTAGGCCTTCTAGATTTATCAAGAAACAAGTTTTCTGGTTCAATCCCAGATAGTTTCGAAAACCTTTCCCAGCTACGAAGGCTATTGCTCTACGAGAATCAACTCTCAGGGACGATACCACCAAGTCTAGGAAAGTGCATCAACTTAGAGATTCTAGACCTTTCTCACAATCAAATGACTGGGGTGATTCCTAGTGAAGTTGCAGGGTTAAGGAGCTTGAAGTTATACTTGAACTTGTCAAGTAATCACTTCAATGGAGAGGTACCAATGGAGCTAAGCAAAATGGACATGGTGCTAGCAATAGACCTGTCTTCCAATAATCTTTCTGGCACAATCCCATCACAACTTGGGAGCTGCATTGCCCTTGAGTCCCTCAACATTTCATCAAATTCCTTACAAGGCCCTGTCCCTGTTTCAATAGGAAAGTTGCCTTTTCTACAGAAACTTGATGTATCTTCAAACCAGTTGGCTGGAGAAATACCAGAATCTCTGCAGCAATCCTTAACTCTCAAGCAACTTAACTTCTCTTTCAACAACTTCTCTGGGAATGTATCAAACAAAGGCGCCTTTTCTTTGCTGAGCTTAGACTCTTTCCTCGGAAATGCTGGCCTCTGTGGCTCAATAAAAGGCATGCCAAGCTGCAAAAAGAAGAAATCTCACCATTTGGCTATACTCTCAGTCCTGCTGTCATTAATCATCACTCCCATTTTTTGCATAGTTGGTTACCCCCTCATGCACAGGTCAAAAATCCGAAGGCACTTGGGAATTTTCGATGATGGGAAATTGCGAGATGATGATGAAGAAGTAGGAAAAGAAGAGCATAAGTACCCGAGAATCTCATATGAGCAGCTCATTGAAGCCACTGGTGGTTTCAGTGCTTCAAGCCTGATTGGTTCAGGCCGATTTGGGCGCGTCTACAAGGGTATCCTTCATGATAACACAGAAATAGCAGTCAAAGTTTTGGATTTGAAGACAGAAGAAGAGATTTCAGGAAGCTTTAAAAGGGAATGCCAAGTCCTGAAGAGAACCAGGCACAGAAATTTGATTAGAATCATCACAACTTGCAGTAGACCGGACTTTAAGGCTCTTGTTCTGCCATTGATGTCGAATGGGAGCCTTGAGAGGCATCTTTACTCGTCGTCATCAAGCCATTGTGGATTGAATCTGATTCAGCTGGTGAGCATCTGCAGTGATGTAGCTGAAGGAGTTGCCTATTTGCACCATCATTCTCCTGTTAGAATTGTACACTGTGATCTTAAACCGAGCAACATTCTACTAGATGATGACATGACAGCTTTGGTTACTGATTTTGGAATTGCAAGACTAGTTAAAGGTGAAGACGAGAGTATTCTCATGAATGACTCGACATCCTTCAGCTCAGCAGATGGCTTGTTATGTGGATCCATTGGCTATATAGCTCCTGAGTATGGAATGGGAAAATGTGCTTCGACTCAGGGAGATGTATTCAGCTTTGGGGTGCTTCTGTTAGAAATTGTTACAGGAAGGCGGCCAACGGATGTCGATTTTCACGAAGGTTCAAGCTTACAGGAATGGATCAAAACCCAGTACCCCCAGAGGCTCGAGCCTATAGTTCAACAAGCAGTAGAAAGGTGTGCCCCAGCTTCAATGCCAAAGCAATATAACAAAATATGGGGGGATGTAGTTCTGGAGTTGATTGAGATTGGTCTTATGTGCACACAGCACAATCCTTCATTGCGCCCAAATATGCAGGATGTTGCTCATGAAATGAGCCAGGTGAAGGAGTACATCTCCAATCCTTCGTCAGCGTTGTTGATTGAAGAAGTGGACACTAAGGTTGATTCACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8 Pkinase

Protein Analysis

995

Amino Acids

109.67

Weight (kDa)

5.73

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 39 - 79 2.4e-09 Leucine rich repeat N-terminal domain
LRR_8 PF13855 208 - 268 9.8e-08 Leucine rich repeat
LRR_8 PF13855 361 - 421 2e-06 Leucine rich repeat
LRR_14 PF23598 427 - 579 8.6e-07 Leucine-rich repeat region
LRR_8 PF13855 487 - 542 5.2e-07 Leucine rich repeat
Pkinase PF00069 679 - 966 1.6e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 681 - 968 2.2e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24130 AT2G24130
fragaria_vesca FvH4_1g00610
malus_domestica MD02G1004900.v1.1 MD15G1148900.v1.1
prunus_persica Prupe.7G266100_v2.0.a1
pyrus_communis pycom02g00360 pycom15g13320
rosa_chinensis RchiOBHm_Chr2g0085231
rosa_laevigata RLG00000015669
rosa_multiflora Rmu_sc0008510.1_g000003 Rmu_sc0011989.1_g000008
rosa_roxburghii Rroxscaffold_2G00155540
rosa_rugosa Rorug01G0458400
rosa_samantha Rh2AG007100 Rh2BG007700 Rh2CG008500 Rh2DG008800
rosa_wichuraiana Rw2G000670

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1420
AccB1I GGYRCC 2 cut(s) 1420, 1721
AccB7I CCANNNNNTGG 2 cut(s) 256, 923
AccI GTMKAC 2 cut(s) 2073, 2227
AccII CGCG 1 cut(s) 2070
AciI CCGC 7 cut(s) 74, 521, 585, 732, 914, 1146, 2665
AclWI GGATC 3 cut(s) 2553, 2566, 2720
AcoI YGGCCR 1 cut(s) 2666
AcsI RAATTY 7 cut(s) 184, 510, 591, 1128, 1546, 1923, 2197
AcuI CTGAAG 3 cut(s) 2198, 2379, 2515
AcyI GRCGYC 1 cut(s) 1722
AfaI GTAC 7 cut(s) 557, 779, 1422, 1985, 2403, 2726, 2924
AfiI CCNNNNNNNGG 6 cut(s) 256, 502, 923, 1286, 2585, 2917
AflII CTTAAG 1 cut(s) 283
AhlI ACTAGT 1 cut(s) 2482
AjnI CCWGG 2 cut(s) 2186, 2910
AjuI GAANNNNNNNTTGG 4 cut(s) 81, 113, 176, 208
Alw21I GWGCWC 2 cut(s) 741, 2855
Alw26I GTCTC 2 cut(s) 108, 240
Alw44I GTGCAC 1 cut(s) 2851
AlwI GGATC 3 cut(s) 2553, 2566, 2720
Ama87I CYCGRG 2 cut(s) 1987, 2738
AoxI GGCC 5 cut(s) 1162, 1558, 1765, 2056, 2666
ApaLI GTGCAC 1 cut(s) 2851
ApeKI GCWGC 8 cut(s) 68, 71, 443, 674, 1512, 1651, 1797, 2005
ApoI RAATTY 7 cut(s) 184, 510, 591, 1128, 1546, 1923, 2197
AseI ATTAAT 1 cut(s) 1850
Asp700I GAANNNNTTC 1 cut(s) 96
Asp718I GGTACC 1 cut(s) 1420
AspLEI GCGC 3 cut(s) 1724, 2070, 2877
AspS9I GGNCC 2 cut(s) 645, 1559
AsuC2I CCSGG 1 cut(s) 145
AsuII TTCGAA 1 cut(s) 1215
AsuNHI GCTAGC 1 cut(s) 1453
AvaI CYCGRG 2 cut(s) 1987, 2738
AvaII GGWCC 1 cut(s) 645
BaeGI GKGCMC 2 cut(s) 2776, 2855
BaeI ACNNNNGTAYC 2 cut(s) 2065, 2098
BamHI GGATCC 1 cut(s) 2558
BanI GGYRCC 2 cut(s) 1420, 1721
BanII GRGCYC 1 cut(s) 741
BbsI GAAGAC 4 cut(s) 408, 1461, 2135, 2502
Bbv12I GWGCWC 2 cut(s) 741, 2855
BbvI GCAGC 8 cut(s) 55, 58, 455, 686, 1499, 1663, 1784, 2017
BccI CCATC 8 cut(s) 751, 1064, 1141, 1164, 1504, 1928, 2388, 2537
BciT130I CCWGG 2 cut(s) 2188, 2912
BciVI GTATCC 1 cut(s) 2093
BclI TGATCA 1 cut(s) 51
BcnI CCSGG 1 cut(s) 145
BcoDI GTCTC 2 cut(s) 108, 240
BcuI ACTAGT 1 cut(s) 2482
BfmI CTRYAG 6 cut(s) 551, 672, 1595, 1649, 2344, 2745
BfoI RGCGCY 1 cut(s) 1725
BfrI CTTAAG 1 cut(s) 283
BfuI GTATCC 1 cut(s) 2093
BglI GCCNNNNNGGC 1 cut(s) 1773
BlpI GCTNAGC 5 cut(s) 447, 728, 1433, 1736, 2536
Bme1390I CCNGG 3 cut(s) 145, 2188, 2912
Bme18I GGWCC 1 cut(s) 645
BmeT110I CYCGRG 2 cut(s) 1987, 2738
BmgT120I GGNCC 2 cut(s) 645, 1559
BmiI GGNNCC 6 cut(s) 669, 1054, 1422, 1723, 2273, 2560
BmrFI CCNGG 3 cut(s) 145, 2188, 2912
BmrI ACTGGG 3 cut(s) 1151, 1347, 2716
BmsI GCATC 6 cut(s) 131, 221, 234, 1305, 2293, 2349
BmtI GCTAGC 1 cut(s) 1457
BmuI ACTGGG 3 cut(s) 1151, 1347, 2716
BpiI GAAGAC 4 cut(s) 408, 1461, 2135, 2502
BplI GAGNNNNNCTC 4 cut(s) 368, 400, 2912, 2944
BpmI CTGGAG 3 cut(s) 521, 1650, 2846
Bpu1102I GCTNAGC 5 cut(s) 447, 728, 1433, 1736, 2536
Bpu14I TTCGAA 1 cut(s) 1215
BpuEI CTTGAG 3 cut(s) 1544, 1652, 2297
BpuMI CCSGG 1 cut(s) 145
BsaBI GATNNNNATC 2 cut(s) 966, 2207
BsaHI GRCGYC 1 cut(s) 1722
BsaI GGTCTC 1 cut(s) 240
BsaJI CCNNGG 1 cut(s) 1753
BsaWI WCCGGW 1 cut(s) 2230
Bsc4I CCNNNNNNNGG 6 cut(s) 256, 502, 923, 1286, 2585, 2917
Bse118I RCCGGY 1 cut(s) 495
Bse1I ACTGG 7 cut(s) 185, 226, 1146, 1342, 1621, 2026, 2722
Bse3DI GCAATG 4 cut(s) 114, 438, 1515, 2870
Bse8I GATNNNNATC 2 cut(s) 966, 2207
BseBI CCWGG 2 cut(s) 2188, 2912
BseDI CCNNGG 1 cut(s) 1753
BseGI GGATG 6 cut(s) 614, 1056, 2525, 2680, 2821, 2896
BseJI GATNNNNATC 2 cut(s) 966, 2207
BseLI CCNNNNNNNGG 6 cut(s) 256, 502, 923, 1286, 2585, 2917
BseMI GCAATG 4 cut(s) 114, 438, 1515, 2870
BseMII CTCAG 9 cut(s) 421, 438, 617, 1278, 1727, 1848, 2550, 2571, 2624
BseNI ACTGG 7 cut(s) 185, 226, 1146, 1342, 1621, 2026, 2722
BseRI GAGGAG 2 cut(s) 679, 981
BseSI GKGCMC 2 cut(s) 2776, 2855
BseXI GCAGC 8 cut(s) 55, 58, 455, 686, 1499, 1663, 1784, 2017
BseYI CCCAGC 3 cut(s) 887, 1227, 2776
Bsh1236I CGCG 1 cut(s) 2070
BshFI GGCC 5 cut(s) 1164, 1560, 1767, 2058, 2668
BshNI GGYRCC 2 cut(s) 1420, 1721
BsiHKAI GWGCWC 2 cut(s) 741, 2855
BsiHKCI CYCGRG 2 cut(s) 1987, 2738
BsiSI CCGG 3 cut(s) 144, 496, 2231
BslFI GGGAC 3 cut(s) 1282, 1513, 1550
BslI CCNNNNNNNGG 6 cut(s) 256, 502, 923, 1286, 2585, 2917
BsmAI GTCTC 2 cut(s) 108, 240
BsmFI GGGAC 3 cut(s) 1282, 1513, 1550
BsmI GAATGC 2 cut(s) 768, 2171
BsnI GGCC 5 cut(s) 1164, 1560, 1767, 2058, 2668
Bso31I GGTCTC 1 cut(s) 240
BsoBI CYCGRG 2 cut(s) 1987, 2738
Bsp119I TTCGAA 1 cut(s) 1215
Bsp1286I GDGCHC 3 cut(s) 741, 2776, 2855
Bsp1407I TGTACA 1 cut(s) 2401
Bsp143I GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
Bsp1720I GCTNAGC 5 cut(s) 447, 728, 1433, 1736, 2536
BspACI CCGC 7 cut(s) 74, 521, 585, 732, 914, 1146, 2665
BspANI GGCC 5 cut(s) 1164, 1560, 1767, 2058, 2668
BspCNI CTCAG 9 cut(s) 420, 439, 618, 1277, 1728, 1847, 2549, 2572, 2623
BspFNI CGCG 1 cut(s) 2070
BspHI TCATGA 4 cut(s) 16, 2089, 2511, 2899
BspLI GGNNCC 6 cut(s) 669, 1054, 1422, 1723, 2273, 2560
BspMAI CTGCAG 4 cut(s) 555, 676, 1653, 2348
BspOI GCTAGC 1 cut(s) 1457
BspPI GGATC 3 cut(s) 2553, 2566, 2720
BspQI GCTCTTC 1 cut(s) 1968
BspT104I TTCGAA 1 cut(s) 1215
BspT107I GGYRCC 2 cut(s) 1420, 1721
BspTI CTTAAG 1 cut(s) 283
BspTNI GGTCTC 1 cut(s) 240
BsrDI GCAATG 4 cut(s) 114, 438, 1515, 2870
BsrFI RCCGGY 1 cut(s) 495
BsrGI TGTACA 1 cut(s) 2401
BsrI ACTGG 7 cut(s) 185, 226, 1146, 1342, 1621, 2026, 2722
BssAI RCCGGY 1 cut(s) 495
BssECI CCNNGG 1 cut(s) 1753
BssMI GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
BssNI GRCGYC 1 cut(s) 1722
Bst2UI CCWGG 2 cut(s) 2188, 2912
Bst4CI ACNGT 2 cut(s) 818, 2408
Bst6I CTCTTC 4 cut(s) 544, 1968, 2133, 2174
BstACI GRCGYC 1 cut(s) 1722
BstAFI CTTAAG 1 cut(s) 283
BstAPI GCANNNNNTGC 1 cut(s) 231
BstAUI TGTACA 1 cut(s) 2401
BstBI TTCGAA 1 cut(s) 1215
BstC8I GCNNGC 3 cut(s) 1455, 1765, 1790
BstEII GGTNACC 1 cut(s) 1880
BstF5I GGATG 6 cut(s) 614, 1056, 2525, 2680, 2821, 2896
BstFNI CGCG 1 cut(s) 2070
BstH2I RGCGCY 1 cut(s) 1725
BstHHI GCGC 3 cut(s) 1724, 2070, 2877
BstKTI GATC 6 cut(s) 54, 268, 931, 2413, 2561, 2715
BstMAI GTCTC 2 cut(s) 108, 240
BstMBI GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
BstMWI GCNNNNNNNGC 5 cut(s) 231, 772, 1237, 1773, 1794
BstNI CCWGG 2 cut(s) 2188, 2912
BstNSI RCATGY 2 cut(s) 727, 1792
BstPI GGTNACC 1 cut(s) 1880
BstSCI CCNGG 3 cut(s) 143, 2186, 2910
BstSFI CTRYAG 6 cut(s) 551, 672, 1595, 1649, 2344, 2745
BstSLI GKGCMC 2 cut(s) 2776, 2855
BstUI CGCG 1 cut(s) 2070
BstV1I GCAGC 8 cut(s) 55, 58, 455, 686, 1499, 1663, 1784, 2017
BstV2I GAAGAC 4 cut(s) 408, 1461, 2135, 2502
BstX2I RGATCY 1 cut(s) 2558
BstXI CCANNNNNNTGG 2 cut(s) 1049, 1628
BstYI RGATCY 1 cut(s) 2558
BsuI GTATCC 1 cut(s) 2093
BsuRI GGCC 5 cut(s) 1164, 1560, 1767, 2058, 2668
BtsCI GGATG 6 cut(s) 614, 1056, 2525, 2680, 2821, 2896
BtsI GCAGTG 1 cut(s) 2353
BtsIMutI CAGTG 4 cut(s) 2019, 2038, 2353, 2404
Cac8I GCNNGC 3 cut(s) 1455, 1765, 1790
CciI TCATGA 4 cut(s) 16, 2089, 2511, 2899
CfoI GCGC 3 cut(s) 1724, 2070, 2877
Cfr10I RCCGGY 1 cut(s) 495
Cfr13I GGNCC 2 cut(s) 645, 1559
CseI GACGC 1 cut(s) 2059
Csp6I GTAC 7 cut(s) 556, 778, 1421, 1984, 2402, 2725, 2923
CviQI GTAC 7 cut(s) 556, 778, 1421, 1984, 2402, 2725, 2923
DinI GGCGCC 1 cut(s) 1723
DpnI GATC 6 cut(s) 53, 267, 930, 2412, 2560, 2714
DpnII GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
DraI TTTAAA 1 cut(s) 2158
EaeI YGGCCR 1 cut(s) 2666
Eam1104I CTCTTC 4 cut(s) 544, 1968, 2133, 2174
EarI CTCTTC 4 cut(s) 544, 1968, 2133, 2174
Ecl136II GAGCTC 1 cut(s) 739
Eco147I AGGCCT 1 cut(s) 1164
Eco24I GRGCYC 1 cut(s) 741
Eco31I GGTCTC 1 cut(s) 240
Eco47I GGWCC 1 cut(s) 645
Eco53kI GAGCTC 1 cut(s) 739
Eco57I CTGAAG 3 cut(s) 2198, 2379, 2515
Eco88I CYCGRG 2 cut(s) 1987, 2738
Eco91I GGTNACC 1 cut(s) 1880
EcoICRI GAGCTC 1 cut(s) 739
EcoO109I RGGNCCY 1 cut(s) 1559
EcoO65I GGTNACC 1 cut(s) 1880
EcoRI GAATTC 1 cut(s) 184
EcoRII CCWGG 2 cut(s) 2186, 2910
EcoT38I GRGCYC 1 cut(s) 741
EgeI GGCGCC 1 cut(s) 1723
EheI GGCGCC 1 cut(s) 1723
FalI AAGNNNNNCTT 2 cut(s) 1370, 1402
FaqI GGGAC 3 cut(s) 1282, 1513, 1550
FauI CCCGC 1 cut(s) 725
FauNDI CATATG 1 cut(s) 1999
FbaI TGATCA 1 cut(s) 51
FblI GTMKAC 2 cut(s) 2073, 2227
FokI GGATG 6 cut(s) 621, 1043, 2512, 2687, 2828, 2903
FriOI GRGCYC 1 cut(s) 741
GlaI GCGC 3 cut(s) 1723, 2069, 2876
GsaI CCCAGC 3 cut(s) 891, 1231, 2780
GsuI CTGGAG 3 cut(s) 521, 1650, 2846
HaeII RGCGCY 1 cut(s) 1725
HaeIII GGCC 5 cut(s) 1164, 1560, 1767, 2058, 2668
HapII CCGG 3 cut(s) 144, 496, 2231
HgaI GACGC 1 cut(s) 2059
HhaI GCGC 3 cut(s) 1724, 2070, 2877
Hin1I GRCGYC 1 cut(s) 1722
Hin6I GCGC 3 cut(s) 1722, 2068, 2875
HinP1I GCGC 3 cut(s) 1722, 2068, 2875
HincII GTYRAC 1 cut(s) 1012
HindII GTYRAC 1 cut(s) 1012
HindIII AAGCTT 2 cut(s) 2152, 2698
HpaII CCGG 3 cut(s) 144, 496, 2231
Hpy166II GTNNAC 6 cut(s) 1012, 2074, 2228, 2404, 2853, 2965
Hpy188I TCNGA 8 cut(s) 157, 230, 748, 1138, 1757, 1910, 2325, 2987
Hpy8I GTNNAC 6 cut(s) 1012, 2074, 2228, 2404, 2853, 2965
Hpy99I CGWCG 1 cut(s) 2299
HpyCH4III ACNGT 2 cut(s) 818, 2408
HpyF10VI GCNNNNNNNGC 5 cut(s) 231, 772, 1237, 1773, 1794
Hsp92I GRCGYC 1 cut(s) 1722
HspAI GCGC 3 cut(s) 1722, 2068, 2875
KasI GGCGCC 1 cut(s) 1721
KpnI GGTACC 1 cut(s) 1424
Ksp22I TGATCA 1 cut(s) 51
Kzo9I GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
LguI GCTCTTC 1 cut(s) 1968
LmnI GCTCC 8 cut(s) 259, 736, 744, 1371, 1429, 1509, 2271, 2581
Lsp1109I GCAGC 8 cut(s) 55, 58, 455, 686, 1499, 1663, 1784, 2017
LweI GCATC 6 cut(s) 131, 221, 234, 1305, 2293, 2349
MaeIII GTNAC 6 cut(s) 362, 818, 1037, 1880, 2458, 2653
MalI GATC 6 cut(s) 53, 267, 930, 2412, 2560, 2714
MboI GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
MflI RGATCY 1 cut(s) 2558
MhlI GDGCHC 3 cut(s) 741, 2776, 2855
Mly113I GGCGCC 1 cut(s) 1722
MlyI GAGTC 4 cut(s) 1535, 1739, 2513, 2602
MmeI TCCRAC 2 cut(s) 640, 744
MroXI GAANNNNTTC 1 cut(s) 96
MslI CAYNNNNRTG 3 cut(s) 609, 1047, 1410
MspA1I CMGCKG 2 cut(s) 446, 2332
MspCI CTTAAG 1 cut(s) 283
MspI CCGG 3 cut(s) 144, 496, 2231
MspR9I CCNGG 3 cut(s) 145, 2188, 2912
Mva1269I GAATGC 2 cut(s) 768, 2171
MvaI CCWGG 2 cut(s) 2188, 2912
MvnI CGCG 1 cut(s) 2070
MwoI GCNNNNNNNGC 5 cut(s) 231, 772, 1237, 1773, 1794
NarI GGCGCC 1 cut(s) 1722
NciI CCSGG 1 cut(s) 145
NdeI CATATG 1 cut(s) 1999
NdeII GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
NheI GCTAGC 1 cut(s) 1453
NlaIV GGNNCC 6 cut(s) 669, 1054, 1422, 1723, 2273, 2560
NmeAIII GCCGAG 1 cut(s) 373
NmuCI GTSAC 1 cut(s) 362
NspI RCATGY 2 cut(s) 727, 1792
NspV TTCGAA 1 cut(s) 1215
PaeI GCATGC 1 cut(s) 1792
PaeR7I CTCGAG 1 cut(s) 2738
PagI TCATGA 4 cut(s) 16, 2089, 2511, 2899
PceI AGGCCT 1 cut(s) 1164
PciSI GCTCTTC 1 cut(s) 1968
PcsI WCGNNNNNNNCGW 1 cut(s) 2685
PctI GAATGC 2 cut(s) 768, 2171
PdmI GAANNNNTTC 1 cut(s) 96
PflMI CCANNNNNTGG 2 cut(s) 256, 923
PfoI TCCNGGA 1 cut(s) 143
PleI GAGTC 4 cut(s) 1534, 1739, 2513, 2602
PluTI GGCGCC 1 cut(s) 1725
PpsI GAGTC 4 cut(s) 1534, 1739, 2513, 2602
PshBI ATTAAT 1 cut(s) 1850
Psp124BI GAGCTC 1 cut(s) 741
Psp6I CCWGG 2 cut(s) 2186, 2910
PspEI GGTNACC 1 cut(s) 1880
PspFI CCCAGC 3 cut(s) 887, 1227, 2776
PspGI CCWGG 2 cut(s) 2186, 2910
PspN4I GGNNCC 6 cut(s) 669, 1054, 1422, 1723, 2273, 2560
PspPI GGNCC 2 cut(s) 645, 1559
PspXI VCTCGAGB 1 cut(s) 2738
PstI CTGCAG 4 cut(s) 555, 676, 1653, 2348
PsuI RGATCY 1 cut(s) 2558
PvuII CAGCTG 2 cut(s) 446, 2332
RsaI GTAC 7 cut(s) 557, 779, 1422, 1985, 2403, 2726, 2924
RsaNI GTAC 7 cut(s) 556, 778, 1421, 1984, 2402, 2725, 2923
RseI CAYNNNNRTG 3 cut(s) 609, 1047, 1410
SacI GAGCTC 1 cut(s) 741
SapI GCTCTTC 1 cut(s) 1968
Sau3AI GATC 6 cut(s) 51, 265, 928, 2410, 2558, 2712
Sau96I GGNCC 2 cut(s) 645, 1559
SchI GAGTC 4 cut(s) 1535, 1739, 2513, 2602
ScrFI CCNGG 3 cut(s) 145, 2188, 2912
SduI GDGCHC 3 cut(s) 741, 2776, 2855
SfaNI GCATC 6 cut(s) 131, 221, 234, 1305, 2293, 2349
SfcI CTRYAG 6 cut(s) 551, 672, 1595, 1649, 2344, 2745
SfoI GGCGCC 1 cut(s) 1723
Sfr274I CTCGAG 1 cut(s) 2738
SfuI TTCGAA 1 cut(s) 1215
SinI GGWCC 1 cut(s) 645
SlaI CTCGAG 1 cut(s) 2738
SmiMI CAYNNNNRTG 3 cut(s) 609, 1047, 1410
SmlI CTYRAG 5 cut(s) 283, 1523, 1667, 2276, 2738
SmoI CTYRAG 5 cut(s) 283, 1523, 1667, 2276, 2738
SpeI ACTAGT 1 cut(s) 2482
SphI GCATGC 1 cut(s) 1792
SseBI AGGCCT 1 cut(s) 1164
SsiI CCGC 7 cut(s) 74, 521, 585, 732, 914, 1146, 2665
SspDI GGCGCC 1 cut(s) 1721
SstI GAGCTC 1 cut(s) 741
StuI AGGCCT 1 cut(s) 1164
StyD4I CCNGG 3 cut(s) 143, 2186, 2910
TaaI ACNGT 2 cut(s) 818, 2408
TatI WGTACW 3 cut(s) 555, 2401, 2922
TauI GCSGC 4 cut(s) 523, 588, 1149, 2668
TscAI CASTG 4 cut(s) 2026, 2038, 2353, 2411
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 8 cut(s) 68, 71, 443, 674, 1512, 1651, 1797, 2005
Tsp45I GTSAC 1 cut(s) 362
TspGWI ACGGA 1 cut(s) 2687
TspRI CASTG 4 cut(s) 2026, 2038, 2353, 2411
Van91I CCANNNNNTGG 2 cut(s) 256, 923
Vha464I CTTAAG 1 cut(s) 283
VneI GTGCAC 1 cut(s) 2851
VpaK11BI GGWCC 1 cut(s) 645
VspI ATTAAT 1 cut(s) 1850
XapI RAATTY 7 cut(s) 184, 510, 591, 1128, 1546, 1923, 2197
XbaI TCTAGA 3 cut(s) 172, 1168, 1312
XceI RCATGY 2 cut(s) 727, 1792
XhoI CTCGAG 1 cut(s) 2738
XmiI GTMKAC 2 cut(s) 2073, 2227
XmnI GAANNNNTTC 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.