Rh2BG062300

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0006455
Physical Location & Seq
Forward (+)
4697859 .. 4699066
1208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG062300.1

Sequence Viewer

Length: 1044 bp
ATGGACTGCTCTTTTCAATTTCTGAAGCTATTGCATATAGAAACCCGGAGGCGGCTTTTAGTTCTTGGGGTAGTAGCTGTTACTTATTTATTGTTTCAGTGGCTGTTGCTTCCGTATGAAAATGCTCTCCGGTCTCTATTGCCTCAAAGTCAGGTTCTGGATCATGTCACAGGTAGCTCCCTCGCAATCCATTCTTCTGCCAAGTCTGTGATGGTTCGCAATCCTCTTACAGTTAATTCTTCGGATTTGATCGATGCTCCTAGATTTGGTGGGGTGGAGAGGTATGCTGATAACTCTAGTCTTGGAGGAGAAATTGTGCATGAAAGTGAACCAAATGAAGAGGAAGGATTTAAGGAAATTGATTCAGTATTGGAAGAGAAAGGGATAGATAATGCTTTTGAACATGCTGTAGATAGAAATGTAGATGAAAATTCTTCATCTGGGAATGGTGTAGATATTGTTGCAAGTCTAGCCATGGTCAGCATTAGCAATGAAGAAAATGGTTCTAATCTAGTTAAGGCCGATGAAGCTAGCGATGACTTCCCGGAGCCAACTGTGTTATCAAAAGATGAAGTTTCTACAGAGAATACTCTGGAAGAAAATACAACTGAAGCAGCAAAGAATTCTGAGGGCGTCAAAACTATATTTCCATCCTCTCAACTCATTTTACCCGCAACAGCTTCATTCATAAACCGGACCAATGTAAGTTACTTGGTGTTCAATGCAAGCTCTTCTGTTGGTTCTGCTTCCCTGGAAAGTGATGTTGTGACTATAAAAAATGGTTCTTTGACAATGACAAGTCCTGGGAAGAAGATGATGAAGTGCAACATGCCGCCAAAATCAATAACATCAATACATGAGATGAACCTTACACTGGTGCGGCACCATGCTAAGCCACGTGCATTGAGAGCACGGTGGTCCTCTGTGCGTGACCAGGATATTCTAGCTGTGAAGTCACAGATCCAGCATCCTCCCATGGTCAAAACTGATCGAGAACTTTATGCCCCTCTCTTCCGCAATGTTTCAATGTTTAAAAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

347

Amino Acids

38.22

Weight (kDa)

5.36

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 882
AciI CCGC 5 cut(s) 52, 672, 833, 880, 1015
AclWI GGATC 2 cut(s) 168, 955
AcsI RAATTY 2 cut(s) 430, 622
AcuI CTGAAG 2 cut(s) 44, 630
AcvI CACGTG 1 cut(s) 899
AcyI GRCGYC 1 cut(s) 633
AfiI CCNNNNNNNGG 3 cut(s) 51, 266, 874
AgsI TTSAA 4 cut(s) 17, 401, 721, 1026
AjnI CCWGG 3 cut(s) 750, 802, 933
AluBI AGCT 7 cut(s) 28, 77, 177, 530, 680, 729, 947
AluI AGCT 7 cut(s) 28, 77, 177, 530, 680, 729, 947
Alw21I GWGCWC 1 cut(s) 913
Alw26I GTCTC 1 cut(s) 138
AlwI GGATC 2 cut(s) 168, 955
AlwNI CAGNNNCTG 2 cut(s) 103, 157
AoxI GGCC 1 cut(s) 519
ApeKI GCWGC 1 cut(s) 614
ApoI RAATTY 2 cut(s) 430, 622
AspS9I GGNCC 2 cut(s) 696, 918
AsuC2I CCSGG 2 cut(s) 46, 545
AsuNHI GCTAGC 1 cut(s) 530
AvaII GGWCC 2 cut(s) 696, 918
BanI GGYRCC 1 cut(s) 882
BbrPI CACGTG 1 cut(s) 899
Bbv12I GWGCWC 1 cut(s) 913
BbvI GCAGC 1 cut(s) 626
BccI CCATC 2 cut(s) 205, 658
BciT130I CCWGG 3 cut(s) 752, 804, 935
BcnI CCSGG 2 cut(s) 46, 545
BcoDI GTCTC 1 cut(s) 138
BfaI CTAG 6 cut(s) 261, 297, 470, 512, 531, 944
BfmI CTRYAG 2 cut(s) 408, 579
BisI GCNGC 4 cut(s) 53, 615, 833, 881
BlpI GCTNAGC 1 cut(s) 891
BlsI GCNGC 4 cut(s) 54, 616, 834, 882
Bme1390I CCNGG 5 cut(s) 46, 545, 752, 804, 935
Bme18I GGWCC 2 cut(s) 696, 918
BmgT120I GGNCC 2 cut(s) 696, 918
BmiI GGNNCC 2 cut(s) 549, 884
BmrFI CCNGG 5 cut(s) 46, 545, 752, 804, 935
BmsI GCATC 2 cut(s) 244, 976
BmtI GCTAGC 1 cut(s) 534
Bpu1102I GCTNAGC 1 cut(s) 891
BpuMI CCSGG 2 cut(s) 46, 545
Bsa29I ATCGAT 1 cut(s) 252
BsaAI YACGTR 1 cut(s) 899
BsaHI GRCGYC 1 cut(s) 633
BsaI GGTCTC 1 cut(s) 138
BsaJI CCNNGG 4 cut(s) 474, 750, 803, 975
BsaWI WCCGGW 2 cut(s) 129, 693
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 266, 874
Bse1I ACTGG 1 cut(s) 879
Bse3DI GCAATG 2 cut(s) 496, 1024
BseBI CCWGG 3 cut(s) 752, 804, 935
BseCI ATCGAT 1 cut(s) 252
BseDI CCNNGG 4 cut(s) 474, 750, 803, 975
BseGI GGATG 2 cut(s) 650, 967
BseLI CCNNNNNNNGG 3 cut(s) 51, 266, 874
BseMI GCAATG 2 cut(s) 496, 1024
BseMII CTCAG 1 cut(s) 618
BseNI ACTGG 1 cut(s) 879
BseRI GAGGAG 1 cut(s) 321
BseXI GCAGC 1 cut(s) 626
BshFI GGCC 1 cut(s) 521
BshNI GGYRCC 1 cut(s) 882
BshVI ATCGAT 1 cut(s) 252
BsiHKAI GWGCWC 1 cut(s) 913
BsiSI CCGG 4 cut(s) 46, 130, 545, 694
BslI CCNNNNNNNGG 3 cut(s) 51, 266, 874
BsmAI GTCTC 1 cut(s) 138
BsnI GGCC 1 cut(s) 521
Bso31I GGTCTC 1 cut(s) 138
Bsp1286I GDGCHC 1 cut(s) 913
Bsp143I GATC 4 cut(s) 160, 249, 960, 988
Bsp1720I GCTNAGC 1 cut(s) 891
Bsp19I CCATGG 2 cut(s) 474, 975
BspACI CCGC 5 cut(s) 52, 672, 833, 880, 1015
BspANI GGCC 1 cut(s) 521
BspCNI CTCAG 1 cut(s) 619
BspDI ATCGAT 1 cut(s) 252
BspLI GGNNCC 2 cut(s) 549, 884
BspOI GCTAGC 1 cut(s) 534
BspPI GGATC 2 cut(s) 168, 955
BspQI GCTCTTC 1 cut(s) 736
BspT107I GGYRCC 1 cut(s) 882
BspTNI GGTCTC 1 cut(s) 138
BsrDI GCAATG 2 cut(s) 496, 1024
BsrI ACTGG 1 cut(s) 879
BssECI CCNNGG 4 cut(s) 474, 750, 803, 975
BssMI GATC 4 cut(s) 160, 249, 960, 988
BssNI GRCGYC 1 cut(s) 633
BssT1I CCWWGG 2 cut(s) 474, 975
Bst2UI CCWGG 3 cut(s) 752, 804, 935
Bst4CI ACNGT 3 cut(s) 232, 556, 915
Bst6I CTCTTC 4 cut(s) 333, 369, 736, 1016
BstACI GRCGYC 1 cut(s) 633
BstBAI YACGTR 1 cut(s) 899
BstC8I GCNNGC 2 cut(s) 532, 727
BstDEI CTNAG 2 cut(s) 627, 891
BstDSI CCRYGG 2 cut(s) 474, 975
BstF5I GGATG 2 cut(s) 650, 967
BstKTI GATC 4 cut(s) 163, 252, 963, 991
BstMAI GTCTC 1 cut(s) 138
BstMBI GATC 4 cut(s) 160, 249, 960, 988
BstMWI GCNNNNNNNGC 3 cut(s) 470, 527, 908
BstNI CCWGG 3 cut(s) 752, 804, 935
BstNSI RCATGY 2 cut(s) 407, 832
BstSCI CCNGG 5 cut(s) 44, 543, 750, 802, 933
BstSFI CTRYAG 2 cut(s) 408, 579
BstV1I GCAGC 1 cut(s) 626
BstX2I RGATCY 1 cut(s) 960
BstYI RGATCY 1 cut(s) 960
Bsu15I ATCGAT 1 cut(s) 252
BsuRI GGCC 1 cut(s) 521
BsuTUI ATCGAT 1 cut(s) 252
BtgI CCRYGG 2 cut(s) 474, 975
BtgZI GCGATG 1 cut(s) 549
BtsCI GGATG 2 cut(s) 650, 967
BtsIMutI CAGTG 2 cut(s) 104, 872
Cac8I GCNNGC 2 cut(s) 532, 727
CaiI CAGNNNCTG 2 cut(s) 103, 157
Cfr13I GGNCC 2 cut(s) 696, 918
ClaI ATCGAT 1 cut(s) 252
CseI GACGC 1 cut(s) 622
CspCI CAANNNNNGTGG 2 cut(s) 885, 920
CviAII CATG 8 cut(s) 164, 320, 404, 475, 829, 857, 887, 976
DdeI CTNAG 2 cut(s) 627, 891
DpnI GATC 4 cut(s) 162, 251, 962, 990
DpnII GATC 4 cut(s) 160, 249, 960, 988
DraI TTTAAA 1 cut(s) 1033
Eam1104I CTCTTC 4 cut(s) 333, 369, 736, 1016
EarI CTCTTC 4 cut(s) 333, 369, 736, 1016
Eco130I CCWWGG 2 cut(s) 474, 975
Eco31I GGTCTC 1 cut(s) 138
Eco47I GGWCC 2 cut(s) 696, 918
Eco57I CTGAAG 2 cut(s) 44, 630
Eco72I CACGTG 1 cut(s) 899
EcoRI GAATTC 1 cut(s) 622
EcoRII CCWGG 3 cut(s) 750, 802, 933
EcoT14I CCWWGG 2 cut(s) 474, 975
ErhI CCWWGG 2 cut(s) 474, 975
FaeI CATG 8 cut(s) 167, 323, 407, 478, 832, 860, 890, 979
FatI CATG 8 cut(s) 163, 319, 403, 474, 828, 856, 886, 975
FauI CCCGC 1 cut(s) 679
Fnu4HI GCNGC 4 cut(s) 53, 615, 833, 881
FokI GGATG 2 cut(s) 637, 954
Fsp4HI GCNGC 4 cut(s) 53, 615, 833, 881
FspBI CTAG 6 cut(s) 261, 297, 470, 512, 531, 944
GluI GCNGC 4 cut(s) 53, 615, 833, 881
HaeIII GGCC 1 cut(s) 521
HapII CCGG 4 cut(s) 46, 130, 545, 694
HgaI GACGC 1 cut(s) 622
Hin1I GRCGYC 1 cut(s) 633
Hin1II CATG 8 cut(s) 167, 323, 407, 478, 832, 860, 890, 979
HinfI GANTC 1 cut(s) 362
HpaII CCGG 4 cut(s) 46, 130, 545, 694
Hpy166II GTNNAC 1 cut(s) 329
Hpy188I TCNGA 3 cut(s) 24, 244, 628
Hpy188III TCNNGA 3 cut(s) 158, 593, 992
Hpy8I GTNNAC 1 cut(s) 329
HpyAV CCTTC 1 cut(s) 338
HpyCH4III ACNGT 3 cut(s) 232, 556, 915
HpyCH4IV ACGT 1 cut(s) 898
HpyCH4V TGCA 6 cut(s) 34, 319, 464, 725, 825, 902
HpyF10VI GCNNNNNNNGC 3 cut(s) 470, 527, 908
HpyF3I CTNAG 2 cut(s) 627, 891
HpySE526I ACGT 1 cut(s) 898
Hsp92I GRCGYC 1 cut(s) 633
Hsp92II CATG 8 cut(s) 167, 323, 407, 478, 832, 860, 890, 979
Kzo9I GATC 4 cut(s) 160, 249, 960, 988
LguI GCTCTTC 1 cut(s) 736
LmnI GCTCC 3 cut(s) 182, 262, 547
Lsp1109I GCAGC 1 cut(s) 626
LweI GCATC 2 cut(s) 244, 976
MaeI CTAG 6 cut(s) 261, 297, 470, 512, 531, 944
MaeII ACGT 1 cut(s) 898
MaeIII GTNAC 6 cut(s) 79, 166, 707, 766, 929, 954
MalI GATC 4 cut(s) 162, 251, 962, 990
MboI GATC 4 cut(s) 160, 249, 960, 988
MflI RGATCY 1 cut(s) 960
MhlI GDGCHC 1 cut(s) 913
MluCI AATT 6 cut(s) 17, 235, 312, 357, 430, 622
MseI TTAA 4 cut(s) 234, 351, 516, 1032
MslI CAYNNNNRTG 1 cut(s) 324
MspI CCGG 4 cut(s) 46, 130, 545, 694
MspR9I CCNGG 5 cut(s) 46, 545, 752, 804, 935
MvaI CCWGG 3 cut(s) 752, 804, 935
MwoI GCNNNNNNNGC 3 cut(s) 470, 527, 908
NciI CCSGG 2 cut(s) 46, 545
NcoI CCATGG 2 cut(s) 474, 975
NdeII GATC 4 cut(s) 160, 249, 960, 988
NheI GCTAGC 1 cut(s) 530
NlaIII CATG 8 cut(s) 167, 323, 407, 478, 832, 860, 890, 979
NlaIV GGNNCC 2 cut(s) 549, 884
NmuCI GTSAC 4 cut(s) 166, 766, 929, 954
NspI RCATGY 2 cut(s) 407, 832
PciSI GCTCTTC 1 cut(s) 736
PfeI GAWTC 1 cut(s) 362
PfoI TCCNGGA 1 cut(s) 543
PkrI GCNGC 4 cut(s) 54, 616, 834, 882
PmaCI CACGTG 1 cut(s) 899
PmlI CACGTG 1 cut(s) 899
Ppu21I YACGTR 1 cut(s) 899
Psp6I CCWGG 3 cut(s) 750, 802, 933
PspCI CACGTG 1 cut(s) 899
PspGI CCWGG 3 cut(s) 750, 802, 933
PspN4I GGNNCC 2 cut(s) 549, 884
PspPI GGNCC 2 cut(s) 696, 918
PstNI CAGNNNCTG 2 cut(s) 103, 157
PsuI RGATCY 1 cut(s) 960
RseI CAYNNNNRTG 1 cut(s) 324
SapI GCTCTTC 1 cut(s) 736
SaqAI TTAA 4 cut(s) 234, 351, 516, 1032
SatI GCNGC 4 cut(s) 53, 615, 833, 881
Sau3AI GATC 4 cut(s) 160, 249, 960, 988
Sau96I GGNCC 2 cut(s) 696, 918
ScrFI CCNGG 5 cut(s) 46, 545, 752, 804, 935
SduI GDGCHC 1 cut(s) 913
SfaNI GCATC 2 cut(s) 244, 976
SfcI CTRYAG 2 cut(s) 408, 579
SinI GGWCC 2 cut(s) 696, 918
SmiMI CAYNNNNRTG 1 cut(s) 324
Sse9I AATT 6 cut(s) 17, 235, 312, 357, 430, 622
SsiI CCGC 5 cut(s) 52, 672, 833, 880, 1015
SspMI CTAG 6 cut(s) 261, 297, 470, 512, 531, 944
StyD4I CCNGG 5 cut(s) 44, 543, 750, 802, 933
StyI CCWWGG 2 cut(s) 474, 975
TaaI ACNGT 3 cut(s) 232, 556, 915
TaiI ACGT 1 cut(s) 901
TaqI TCGA 2 cut(s) 252, 991
TasI AATT 6 cut(s) 17, 235, 312, 357, 430, 622
TauI GCSGC 3 cut(s) 55, 835, 883
TfiI GAWTC 1 cut(s) 362
Tru1I TTAA 4 cut(s) 234, 351, 516, 1032
Tru9I TTAA 4 cut(s) 234, 351, 516, 1032
TscAI CASTG 2 cut(s) 104, 879
TseFI GTSAC 4 cut(s) 166, 766, 929, 954
TseI GCWGC 1 cut(s) 614
Tsp45I GTSAC 4 cut(s) 166, 766, 929, 954
TspGWI ACGGA 1 cut(s) 102
TspRI CASTG 2 cut(s) 104, 879
VpaK11BI GGWCC 2 cut(s) 696, 918
XapI RAATTY 2 cut(s) 430, 622
XceI RCATGY 2 cut(s) 407, 832
XcmI CCANNNNNNNNNTGG 1 cut(s) 208
XspI CTAG 6 cut(s) 261, 297, 470, 512, 531, 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.