C2 domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0392471 |
| rosa_laevigata | RLG00000003406 |
| rosa_samantha | Rh2AG371500 Rh2BG380000 Rh2CG359100 Rh4CG046100 Rh4DG040200 Rh5BG532800 Rh5DG544800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 111, 199 |
| AclWI | GGATC | 2 cut(s) | 20, 32 |
| AfaI | GTAC | 1 cut(s) | 216 |
| AflIII | ACRYGT | 1 cut(s) | 228 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| Alw26I | GTCTC | 1 cut(s) | 184 |
| AlwI | GGATC | 2 cut(s) | 20, 32 |
| BcoDI | GTCTC | 1 cut(s) | 184 |
| BmcAI | AGTACT | 1 cut(s) | 216 |
| BmiI | GGNNCC | 1 cut(s) | 167 |
| Bse1I | ACTGG | 1 cut(s) | 100 |
| BseMII | CTCAG | 1 cut(s) | 36 |
| BseNI | ACTGG | 1 cut(s) | 100 |
| BsmAI | GTCTC | 1 cut(s) | 184 |
| Bsp143I | GATC | 2 cut(s) | 25, 37 |
| BspACI | CCGC | 2 cut(s) | 111, 199 |
| BspCNI | CTCAG | 1 cut(s) | 35 |
| BspLI | GGNNCC | 1 cut(s) | 167 |
| BspPI | GGATC | 2 cut(s) | 20, 32 |
| BsrI | ACTGG | 1 cut(s) | 100 |
| BssMI | GATC | 2 cut(s) | 25, 37 |
| BstC8I | GCNNGC | 3 cut(s) | 76, 80, 203 |
| BstDEI | CTNAG | 1 cut(s) | 22 |
| BstKTI | GATC | 2 cut(s) | 28, 40 |
| BstMAI | GTCTC | 1 cut(s) | 184 |
| BstMBI | GATC | 2 cut(s) | 25, 37 |
| BstNSI | RCATGY | 1 cut(s) | 232 |
| BstX2I | RGATCY | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 25 |
| Cac8I | GCNNGC | 3 cut(s) | 76, 80, 203 |
| Csp6I | GTAC | 1 cut(s) | 215 |
| CviAII | CATG | 2 cut(s) | 175, 229 |
| CviJI | RGCY | 3 cut(s) | 9, 74, 205 |
| CviKI_1 | RGCY | 3 cut(s) | 9, 74, 205 |
| CviQI | GTAC | 1 cut(s) | 215 |
| DdeI | CTNAG | 1 cut(s) | 22 |
| DpnI | GATC | 2 cut(s) | 27, 39 |
| DpnII | GATC | 2 cut(s) | 25, 37 |
| EciI | GGCGGA | 2 cut(s) | 126, 188 |
| FaeI | CATG | 2 cut(s) | 178, 232 |
| FaiI | YATR | 3 cut(s) | 176, 226, 230 |
| FatI | CATG | 2 cut(s) | 174, 228 |
| Hin1II | CATG | 2 cut(s) | 178, 232 |
| HinfI | GANTC | 1 cut(s) | 114 |
| Hpy166II | GTNNAC | 2 cut(s) | 69, 180 |
| Hpy188I | TCNGA | 4 cut(s) | 25, 119, 161, 235 |
| Hpy188III | TCNNGA | 1 cut(s) | 41 |
| Hpy8I | GTNNAC | 2 cut(s) | 69, 180 |
| HpyAV | CCTTC | 2 cut(s) | 39, 156 |
| HpyF3I | CTNAG | 1 cut(s) | 22 |
| Hsp92II | CATG | 2 cut(s) | 178, 232 |
| Kzo9I | GATC | 2 cut(s) | 25, 37 |
| LpnPI | CCDG | 4 cut(s) | 54, 81, 215, 260 |
| MalI | GATC | 2 cut(s) | 27, 39 |
| MboI | GATC | 2 cut(s) | 25, 37 |
| MflI | RGATCY | 1 cut(s) | 25 |
| MluCI | AATT | 1 cut(s) | 86 |
| MnlI | CCTC | 2 cut(s) | 31, 117 |
| MslI | CAYNNNNRTG | 1 cut(s) | 185 |
| NdeII | GATC | 2 cut(s) | 25, 37 |
| NlaIII | CATG | 2 cut(s) | 178, 232 |
| NlaIV | GGNNCC | 1 cut(s) | 167 |
| NspI | RCATGY | 1 cut(s) | 232 |
| PciI | ACATGT | 1 cut(s) | 228 |
| PfeI | GAWTC | 1 cut(s) | 114 |
| PscI | ACATGT | 1 cut(s) | 228 |
| PspN4I | GGNNCC | 1 cut(s) | 167 |
| PsuI | RGATCY | 1 cut(s) | 25 |
| RsaI | GTAC | 1 cut(s) | 216 |
| RsaNI | GTAC | 1 cut(s) | 215 |
| RseI | CAYNNNNRTG | 1 cut(s) | 185 |
| Sau3AI | GATC | 2 cut(s) | 25, 37 |
| ScaI | AGTACT | 1 cut(s) | 216 |
| SetI | ASST | 4 cut(s) | 23, 76, 153, 249 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 185 |
| Sse9I | AATT | 1 cut(s) | 86 |
| SsiI | CCGC | 2 cut(s) | 111, 199 |
| TaqI | TCGA | 1 cut(s) | 242 |
| TasI | AATT | 1 cut(s) | 86 |
| TatI | WGTACW | 1 cut(s) | 214 |
| TfiI | GAWTC | 1 cut(s) | 114 |
| XceI | RCATGY | 1 cut(s) | 232 |
| ZrmI | AGTACT | 1 cut(s) | 216 |