Rh4CG046100

C2 domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
9141625 .. 9154659
13035 bp
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UTR
Exon/CDS
Intron
Rh4CG046100.1

Sequence Viewer

Length: 297 bp
ATGTATGCTAACTGTAGACATTTCAGGCCAAAGTTGCTACGTAAAGGCGTAGTTCAGCACCTTTATTTCGGAAGGAACCCACCCATGTTCACAGAGATGAGACTTCTCTGCCAGTCTACTGGTGATGACCATTTGAAGCAGAAGCAACCCTGCCCTACATCTGCTACCAAAGAGCCGCCAACTCAGATGGGAGCAATGAGAGCCACCTATCCAGGATCGAAACCTCCACCCCAGAAAGCCAGAATACCCTTTAAGTTGCCCACGTCGGTGTTGGGGTTGAAGCACAGATCAGAGTAG

Protein Analysis

98

Amino Acids

11.16

Weight (kDa)

10.3

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018999)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 16, 116
AciI CCGC 1 cut(s) 176
AclWI GGATC 1 cut(s) 223
AgsI TTSAA 2 cut(s) 136, 280
AjiI CACGTC 1 cut(s) 264
AjnI CCWGG 1 cut(s) 211
AleI CACNNNNGTG 1 cut(s) 266
Alw26I GTCTC 1 cut(s) 94
AlwI GGATC 1 cut(s) 223
AoxI GGCC 1 cut(s) 26
AsuHPI GGTGA 1 cut(s) 134
BccI CCATC 1 cut(s) 181
BciT130I CCWGG 1 cut(s) 213
BcoDI GTCTC 1 cut(s) 94
BfmI CTRYAG 1 cut(s) 13
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
Bme1390I CCNGG 1 cut(s) 213
BmgBI CACGTC 1 cut(s) 264
BmiI GGNNCC 1 cut(s) 77
BmrFI CCNGG 1 cut(s) 213
BsaAI YACGTR 1 cut(s) 41
Bse1I ACTGG 2 cut(s) 112, 124
Bse3DI GCAATG 1 cut(s) 201
BseBI CCWGG 1 cut(s) 213
BseMI GCAATG 1 cut(s) 201
BseMII CTCAG 1 cut(s) 197
BseNI ACTGG 2 cut(s) 112, 124
BshFI GGCC 1 cut(s) 28
BsmAI GTCTC 1 cut(s) 94
BsnI GGCC 1 cut(s) 28
Bsp143I GATC 2 cut(s) 215, 287
BspACI CCGC 1 cut(s) 176
BspANI GGCC 1 cut(s) 28
BspCNI CTCAG 1 cut(s) 196
BspLI GGNNCC 1 cut(s) 77
BspPI GGATC 1 cut(s) 223
BsrDI GCAATG 1 cut(s) 201
BsrI ACTGG 2 cut(s) 112, 124
BssMI GATC 2 cut(s) 215, 287
Bst2UI CCWGG 1 cut(s) 213
Bst4CI ACNGT 1 cut(s) 14
BstBAI YACGTR 1 cut(s) 41
BstDEI CTNAG 1 cut(s) 183
BstKTI GATC 2 cut(s) 218, 290
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 2 cut(s) 215, 287
BstMWI GCNNNNNNNGC 2 cut(s) 34, 200
BstNI CCWGG 1 cut(s) 213
BstSCI CCNGG 1 cut(s) 211
BstSFI CTRYAG 1 cut(s) 13
BstSNI TACGTA 1 cut(s) 41
BstXI CCANNNNNNTGG 1 cut(s) 119
BsuRI GGCC 1 cut(s) 28
BtrI CACGTC 1 cut(s) 264
CviAII CATG 1 cut(s) 85
CviJI RGCY 4 cut(s) 28, 175, 203, 239
CviKI_1 RGCY 4 cut(s) 28, 175, 203, 239
DdeI CTNAG 1 cut(s) 183
DpnI GATC 2 cut(s) 217, 289
DpnII GATC 2 cut(s) 215, 287
Eco105I TACGTA 1 cut(s) 41
EcoRII CCWGG 1 cut(s) 211
FaeI CATG 1 cut(s) 88
FaiI YATR 2 cut(s) 6, 86
FatI CATG 1 cut(s) 84
FblI GTMKAC 2 cut(s) 16, 116
Fnu4HI GCNGC 1 cut(s) 176
Fsp4HI GCNGC 1 cut(s) 176
GluI GCNGC 1 cut(s) 176
HaeIII GGCC 1 cut(s) 28
Hin1II CATG 1 cut(s) 88
HphI GGTGA 1 cut(s) 134
Hpy166II GTNNAC 3 cut(s) 17, 90, 117
Hpy188I TCNGA 3 cut(s) 71, 186, 292
Hpy8I GTNNAC 3 cut(s) 17, 90, 117
Hpy99I CGWCG 1 cut(s) 268
HpyAV CCTTC 1 cut(s) 66
HpyCH4III ACNGT 1 cut(s) 14
HpyCH4IV ACGT 2 cut(s) 40, 263
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 200
HpyF3I CTNAG 1 cut(s) 183
HpySE526I ACGT 2 cut(s) 40, 263
Hsp92II CATG 1 cut(s) 88
Kzo9I GATC 2 cut(s) 215, 287
LmnI GCTCC 1 cut(s) 191
LpnPI CCDG 8 cut(s) 10, 105, 125, 163, 198, 225, 245, 253
MaeII ACGT 2 cut(s) 40, 263
MalI GATC 2 cut(s) 217, 289
MboI GATC 2 cut(s) 215, 287
MnlI CCTC 1 cut(s) 234
MseI TTAA 1 cut(s) 252
MslI CAYNNNNRTG 2 cut(s) 95, 266
MspR9I CCNGG 1 cut(s) 213
MvaI CCWGG 1 cut(s) 213
MwoI GCNNNNNNNGC 2 cut(s) 34, 200
NdeII GATC 2 cut(s) 215, 287
NlaIII CATG 1 cut(s) 88
NlaIV GGNNCC 1 cut(s) 77
OliI CACNNNNGTG 1 cut(s) 266
PfoI TCCNGGA 1 cut(s) 211
PkrI GCNGC 1 cut(s) 177
Ppu21I YACGTR 1 cut(s) 41
Psp6I CCWGG 1 cut(s) 211
PspGI CCWGG 1 cut(s) 211
PspN4I GGNNCC 1 cut(s) 77
RseI CAYNNNNRTG 2 cut(s) 95, 266
SaqAI TTAA 1 cut(s) 252
SatI GCNGC 1 cut(s) 176
Sau3AI GATC 2 cut(s) 215, 287
ScrFI CCNGG 1 cut(s) 213
SetI ASST 5 cut(s) 43, 63, 209, 226, 266
SfcI CTRYAG 1 cut(s) 13
SmiMI CAYNNNNRTG 2 cut(s) 95, 266
SnaBI TACGTA 1 cut(s) 41
SsiI CCGC 1 cut(s) 176
StyD4I CCNGG 1 cut(s) 211
TaaI ACNGT 1 cut(s) 14
TaiI ACGT 2 cut(s) 43, 266
TaqI TCGA 1 cut(s) 218
TauI GCSGC 1 cut(s) 178
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
XcmI CCANNNNNNNNNTGG 1 cut(s) 268
XmiI GTMKAC 2 cut(s) 16, 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.