Rh2BG447300
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
63171894 .. 63186218
14325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG447300.1

Sequence Viewer

Length: 651 bp
ATGGAGAACAGAGTCCACAAACAACGAAATATTACATCCACATATGGTGGCATATCATCATCATCAAGTTTTCAGTTTGATTATGTCTTTGATTGGACGATCTTGAAATATCAGCAGTCGCAGATTGCCACACCTTCTACTCGTGCTCCTGGTGGTGCTGGACCAAGCTCTGGACTGCCTCCAGTTGTTGCAAATGTTGAAAGACAATCAGGTGGGGAGGAAGTTAGACCTACTGGTTGGTCGTTGGCAGATCCCTCACGTAGGAGAAATTCTGGACCGATTGTAAATCCTGGAAGCTTGTCTAAACAAAAAAGTCCTGTTGCAAATGATCCATCTGTGTCTAAAGACGCAATGTTATCAAGTTCTAGTTTTTTGCGGTCAACTGGATCATCAAGGAGGGCTGTAGTTTCTAGCAGTCGGGATGCAGTAATTGTTGGCAGTGAATCCGAGCCCTCTCGCCCTCAAACCACAGAGGCAAGTCCTGGAACACTAGGTAAAATTTCTTCTATCCAAAGAAGTTCACCAGTTGTATCTTCAGAGCAGGATCGTACCACTTCTGGTAGAAATGTTTCGACCGTAAAAAACTTAGAGTCCACCCTCAGAGTTATTGAGACCCTTCATTTTAATAGCGACGAGAGAGTACAGTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

216

Amino Acids

23.18

Weight (kDa)

9.9

Isoelectric Point (pI)

80.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017995)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 170
AciI CCGC 1 cut(s) 376
AclWI GGATC 4 cut(s) 245, 323, 394, 552
AcsI RAATTY 2 cut(s) 268, 498
AcuI CTGAAG 1 cut(s) 519
AfaI GTAC 2 cut(s) 550, 642
AfiI CCNNNNNNNGG 2 cut(s) 170, 261
AgsI TTSAA 2 cut(s) 106, 200
AjnI CCWGG 3 cut(s) 148, 289, 481
AluBI AGCT 2 cut(s) 168, 297
AluI AGCT 2 cut(s) 168, 297
Alw21I GWGCWC 1 cut(s) 148
Alw26I GTCTC 1 cut(s) 605
AlwI GGATC 4 cut(s) 245, 323, 394, 552
ApoI RAATTY 2 cut(s) 268, 498
Asp700I GAANNNNTTC 1 cut(s) 568
AspS9I GGNCC 2 cut(s) 161, 275
AsuHPI GGTGA 1 cut(s) 513
AvaII GGWCC 2 cut(s) 161, 275
BanII GRGCYC 1 cut(s) 453
BarI GAAGNNNNNNTAC 2 cut(s) 487, 519
BauI CACGAG 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 148
BccI CCATC 1 cut(s) 340
BciT130I CCWGG 3 cut(s) 150, 291, 483
BcoDI GTCTC 1 cut(s) 605
BfaI CTAG 3 cut(s) 366, 411, 491
BfmI CTRYAG 1 cut(s) 402
Bme1390I CCNGG 3 cut(s) 150, 291, 483
Bme18I GGWCC 2 cut(s) 161, 275
BmgT120I GGNCC 2 cut(s) 161, 275
BmrFI CCNGG 3 cut(s) 150, 291, 483
BmsI GCATC 1 cut(s) 412
BpmI CTGGAG 1 cut(s) 165
BsaAI YACGTR 1 cut(s) 260
BsaI GGTCTC 1 cut(s) 605
BsaXI ACNNNNNCTCC 2 cut(s) 130, 160
Bsc4I CCNNNNNNNGG 2 cut(s) 170, 261
Bse1I ACTGG 4 cut(s) 182, 238, 388, 524
Bse3DI GCAATG 1 cut(s) 357
BseBI CCWGG 3 cut(s) 150, 291, 483
BseGI GGATG 2 cut(s) 35, 427
BseLI CCNNNNNNNGG 2 cut(s) 170, 261
BseMI GCAATG 1 cut(s) 357
BseMII CTCAG 1 cut(s) 613
BseNI ACTGG 4 cut(s) 182, 238, 388, 524
Bsh1285I CGRYCG 1 cut(s) 576
BsiEI CGRYCG 1 cut(s) 576
BsiHKAI GWGCWC 1 cut(s) 148
BslI CCNNNNNNNGG 2 cut(s) 170, 261
BsmAI GTCTC 1 cut(s) 605
Bso31I GGTCTC 1 cut(s) 605
Bsp1286I GDGCHC 2 cut(s) 148, 453
Bsp143I GATC 5 cut(s) 99, 250, 328, 386, 544
BspACI CCGC 1 cut(s) 376
BspCNI CTCAG 1 cut(s) 612
BspPI GGATC 4 cut(s) 245, 323, 394, 552
BspTNI GGTCTC 1 cut(s) 605
BsrDI GCAATG 1 cut(s) 357
BsrI ACTGG 4 cut(s) 182, 238, 388, 524
BssMI GATC 5 cut(s) 99, 250, 328, 386, 544
BssSI CACGAG 1 cut(s) 141
Bst2BI CACGAG 1 cut(s) 141
Bst2UI CCWGG 3 cut(s) 150, 291, 483
Bst4CI ACNGT 2 cut(s) 577, 645
BstBAI YACGTR 1 cut(s) 260
BstDEI CTNAG 2 cut(s) 586, 599
BstENI CCTNNNNNAGG 1 cut(s) 259
BstF5I GGATG 2 cut(s) 35, 427
BstKTI GATC 5 cut(s) 102, 253, 331, 389, 547
BstMAI GTCTC 1 cut(s) 605
BstMBI GATC 5 cut(s) 99, 250, 328, 386, 544
BstMCI CGRYCG 1 cut(s) 576
BstNI CCWGG 3 cut(s) 150, 291, 483
BstSCI CCNGG 3 cut(s) 148, 289, 481
BstSFI CTRYAG 1 cut(s) 402
BstX2I RGATCY 1 cut(s) 250
BstYI RGATCY 1 cut(s) 250
BtsCI GGATG 2 cut(s) 35, 427
BtsI GCAGTG 1 cut(s) 445
BtsIMutI CAGTG 1 cut(s) 445
Cfr13I GGNCC 2 cut(s) 161, 275
CseI GACGC 1 cut(s) 356
Csp6I GTAC 2 cut(s) 549, 641
CviJI RGCY 4 cut(s) 168, 297, 401, 451
CviKI_1 RGCY 4 cut(s) 168, 297, 401, 451
CviQI GTAC 2 cut(s) 549, 641
DdeI CTNAG 2 cut(s) 586, 599
DpnI GATC 5 cut(s) 101, 252, 330, 388, 546
DpnII GATC 5 cut(s) 99, 250, 328, 386, 544
Eco24I GRGCYC 1 cut(s) 453
Eco31I GGTCTC 1 cut(s) 605
Eco47I GGWCC 2 cut(s) 161, 275
Eco57I CTGAAG 1 cut(s) 519
EcoNI CCTNNNNNAGG 1 cut(s) 259
EcoRII CCWGG 3 cut(s) 148, 289, 481
EcoT38I GRGCYC 1 cut(s) 453
FaiI YATR 4 cut(s) 43, 45, 53, 84
FauNDI CATATG 1 cut(s) 43
FokI GGATG 2 cut(s) 22, 434
FriOI GRGCYC 1 cut(s) 453
FspBI CTAG 3 cut(s) 366, 411, 491
GsuI CTGGAG 1 cut(s) 165
HgaI GACGC 1 cut(s) 356
HincII GTYRAC 1 cut(s) 381
HindII GTYRAC 1 cut(s) 381
HindIII AAGCTT 1 cut(s) 295
HinfI GANTC 3 cut(s) 12, 443, 590
HphI GGTGA 1 cut(s) 513
Hpy166II GTNNAC 4 cut(s) 16, 381, 521, 594
Hpy188I TCNGA 3 cut(s) 448, 538, 602
Hpy188III TCNNGA 4 cut(s) 103, 171, 273, 419
Hpy8I GTNNAC 4 cut(s) 16, 381, 521, 594
Hpy99I CGWCG 1 cut(s) 635
HpyAV CCTTC 2 cut(s) 144, 626
HpyCH4III ACNGT 2 cut(s) 577, 645
HpyCH4IV ACGT 1 cut(s) 259
HpyCH4V TGCA 3 cut(s) 191, 323, 425
HpyF3I CTNAG 2 cut(s) 586, 599
HpySE526I ACGT 1 cut(s) 259
Kzo9I GATC 5 cut(s) 99, 250, 328, 386, 544
LmnI GCTCC 1 cut(s) 151
LweI GCATC 1 cut(s) 412
MaeI CTAG 3 cut(s) 366, 411, 491
MaeII ACGT 1 cut(s) 259
MalI GATC 5 cut(s) 101, 252, 330, 388, 546
MboI GATC 5 cut(s) 99, 250, 328, 386, 544
MboII GAAGA 2 cut(s) 495, 525
MflI RGATCY 1 cut(s) 250
MhlI GDGCHC 2 cut(s) 148, 453
MluCI AATT 3 cut(s) 268, 429, 498
MlyI GAGTC 2 cut(s) 21, 599
MnlI CCTC 8 cut(s) 189, 211, 265, 390, 463, 466, 471, 608
MroXI GAANNNNTTC 1 cut(s) 568
MseI TTAA 1 cut(s) 624
MspR9I CCNGG 3 cut(s) 150, 291, 483
MvaI CCWGG 3 cut(s) 150, 291, 483
NdeI CATATG 1 cut(s) 43
NdeII GATC 5 cut(s) 99, 250, 328, 386, 544
PdmI GAANNNNTTC 1 cut(s) 568
PfeI GAWTC 1 cut(s) 443
PflMI CCANNNNNTGG 1 cut(s) 170
PfoI TCCNGGA 2 cut(s) 289, 481
PleI GAGTC 2 cut(s) 20, 598
PpsI GAGTC 2 cut(s) 20, 598
Ppu21I YACGTR 1 cut(s) 260
Psp6I CCWGG 3 cut(s) 148, 289, 481
PspGI CCWGG 3 cut(s) 148, 289, 481
PspPI GGNCC 2 cut(s) 161, 275
PsuI RGATCY 1 cut(s) 250
RsaI GTAC 2 cut(s) 550, 642
RsaNI GTAC 2 cut(s) 549, 641
SaqAI TTAA 1 cut(s) 624
Sau3AI GATC 5 cut(s) 99, 250, 328, 386, 544
Sau96I GGNCC 2 cut(s) 161, 275
SchI GAGTC 2 cut(s) 21, 599
ScrFI CCNGG 3 cut(s) 150, 291, 483
SduI GDGCHC 2 cut(s) 148, 453
SetI ASST 7 cut(s) 136, 170, 214, 232, 262, 299, 496
SfaNI GCATC 1 cut(s) 412
SfcI CTRYAG 1 cut(s) 402
SinI GGWCC 2 cut(s) 161, 275
Sse9I AATT 3 cut(s) 268, 429, 498
SsiI CCGC 1 cut(s) 376
SspI AATATT 1 cut(s) 31
SspMI CTAG 3 cut(s) 366, 411, 491
StyD4I CCNGG 3 cut(s) 148, 289, 481
TaaI ACNGT 2 cut(s) 577, 645
TaiI ACGT 1 cut(s) 262
TaqI TCGA 1 cut(s) 572
TaqII GACCGA 1 cut(s) 292
TasI AATT 3 cut(s) 268, 429, 498
TatI WGTACW 1 cut(s) 640
TfiI GAWTC 1 cut(s) 443
Tru1I TTAA 1 cut(s) 624
Tru9I TTAA 1 cut(s) 624
TscAI CASTG 1 cut(s) 445
TspDTI ATGAA 1 cut(s) 608
TspRI CASTG 1 cut(s) 445
Van91I CCANNNNNTGG 1 cut(s) 170
VpaK11BI GGWCC 2 cut(s) 161, 275
XagI CCTNNNNNAGG 1 cut(s) 259
XapI RAATTY 2 cut(s) 268, 498
XmnI GAANNNNTTC 1 cut(s) 568
XspI CTAG 3 cut(s) 366, 411, 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.