Rh2BG514900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
72292559 .. 72294442
1884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG514900.1

Sequence Viewer

Length: 240 bp
ATGCCAGATGCTGCTTTCTCAGAAGTACTGGAAGCCTGTTCCCTTACTCCTAATTCCATTCCTATACCTACTCCAACTAATAGTTCTAGCATTGGAACAACTCCGACACCCACAACCACTCCTACTCAGAAGGTGGACCAAAGTCATCAACAAGGAGCTGCAGCACTACCACCGCTTCCATCAGTTTCAGAAGATGCTGATGGAACAACCAGACAAGGCACTGCAAGAAGTGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

79

Amino Acids

8.06

Weight (kDa)

4.21

Isoelectric Point (pI)

46.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017849)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 173
AfaI GTAC 1 cut(s) 27
AjuI GAANNNNNNNTTGG 2 cut(s) 67, 99
AluBI AGCT 1 cut(s) 158
AluI AGCT 1 cut(s) 158
AlwNI CAGNNNCTG 1 cut(s) 11
ApeKI GCWGC 3 cut(s) 11, 158, 161
AspS9I GGNCC 1 cut(s) 136
AvaII GGWCC 1 cut(s) 136
BbvI GCAGC 2 cut(s) 145, 173
BccI CCATC 2 cut(s) 187, 194
BfaI CTAG 1 cut(s) 87
BfmI CTRYAG 1 cut(s) 159
BisI GCNGC 3 cut(s) 12, 159, 162
BlsI GCNGC 3 cut(s) 13, 160, 163
BmcAI AGTACT 1 cut(s) 27
Bme18I GGWCC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 136
BmsI GCATC 1 cut(s) 184
BoxI GACNNNNGTC 1 cut(s) 141
BsaXI ACNNNNNCTCC 2 cut(s) 103, 133
Bse1I ACTGG 1 cut(s) 33
BseMII CTCAG 2 cut(s) 33, 140
BseNI ACTGG 1 cut(s) 33
BseXI GCAGC 2 cut(s) 145, 173
BspACI CCGC 1 cut(s) 173
BspCNI CTCAG 2 cut(s) 32, 139
BspMAI CTGCAG 1 cut(s) 163
BsrI ACTGG 1 cut(s) 33
BstDEI CTNAG 2 cut(s) 19, 126
BstPAI GACNNNNGTC 1 cut(s) 141
BstSFI CTRYAG 1 cut(s) 159
BstV1I GCAGC 2 cut(s) 145, 173
BtsI GCAGTG 1 cut(s) 219
BtsIMutI CAGTG 1 cut(s) 219
CaiI CAGNNNCTG 1 cut(s) 11
Cfr13I GGNCC 1 cut(s) 136
Csp6I GTAC 1 cut(s) 26
CviJI RGCY 2 cut(s) 35, 158
CviKI_1 RGCY 2 cut(s) 35, 158
CviQI GTAC 1 cut(s) 26
DdeI CTNAG 2 cut(s) 19, 126
Eco47I GGWCC 1 cut(s) 136
FaiI YATR 1 cut(s) 65
Fnu4HI GCNGC 3 cut(s) 12, 159, 162
Fsp4HI GCNGC 3 cut(s) 12, 159, 162
FspBI CTAG 1 cut(s) 87
GluI GCNGC 3 cut(s) 12, 159, 162
Hpy166II GTNNAC 1 cut(s) 136
Hpy188I TCNGA 4 cut(s) 22, 105, 129, 190
Hpy8I GTNNAC 1 cut(s) 136
HpyAV CCTTC 1 cut(s) 124
HpyCH4V TGCA 2 cut(s) 161, 224
HpyF3I CTNAG 2 cut(s) 19, 126
LmnI GCTCC 1 cut(s) 155
LpnPI CCDG 4 cut(s) 14, 18, 49, 223
Lsp1109I GCAGC 2 cut(s) 145, 173
LweI GCATC 1 cut(s) 184
MaeI CTAG 1 cut(s) 87
MboII GAAGA 1 cut(s) 203
MluCI AATT 1 cut(s) 52
MmeI TCCRAC 2 cut(s) 98, 128
PkrI GCNGC 3 cut(s) 13, 160, 163
PshAI GACNNNNGTC 1 cut(s) 141
PspPI GGNCC 1 cut(s) 136
PstI CTGCAG 1 cut(s) 163
PstNI CAGNNNCTG 1 cut(s) 11
RsaI GTAC 1 cut(s) 27
RsaNI GTAC 1 cut(s) 26
SatI GCNGC 3 cut(s) 12, 159, 162
Sau96I GGNCC 1 cut(s) 136
ScaI AGTACT 1 cut(s) 27
SetI ASST 3 cut(s) 70, 135, 160
SfaNI GCATC 1 cut(s) 184
SfcI CTRYAG 1 cut(s) 159
SgeI CNNG 7 cut(s) 17, 41, 48, 99, 164, 222, 227
SinI GGWCC 1 cut(s) 136
Sse9I AATT 1 cut(s) 52
SsiI CCGC 1 cut(s) 173
SspMI CTAG 1 cut(s) 87
TasI AATT 1 cut(s) 52
TatI WGTACW 1 cut(s) 25
TscAI CASTG 1 cut(s) 226
TseI GCWGC 3 cut(s) 11, 158, 161
TspRI CASTG 1 cut(s) 226
VpaK11BI GGWCC 1 cut(s) 136
XspI CTAG 1 cut(s) 87
ZrmI AGTACT 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.