Rh2DG274300

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
30580954 .. 30582852
1899 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG274300.1

Sequence Viewer

Length: 300 bp
ATGGTTTCAGATTTATTGGTTATGGAAGGGACATCTAAGACTCCCAATTCCACTCCCATGCATACTCTAACTAATGGTTCCAGCACTAGAACCACTCCAACACCCACACCCAATCCTACTCAGATGGTGGATCAAGGTCATCAACAAGGAGCTACTGCACTGCCTAGTTGCTCCGCTACAGATTTTTGGATTACTTCGGCAAATTGGACAGGGAGAACTACTGTGGAAGTTAAAATGGACCAGTTTGCAAATCCTCCCTGCCTGATATTTGCTTTATGTTGGTCTTGTTTCAGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

99

Amino Acids

10.77

Weight (kDa)

5.99

Isoelectric Point (pI)

24.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017849)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 174
AclWI GGATC 1 cut(s) 138
AluBI AGCT 1 cut(s) 152
AluI AGCT 1 cut(s) 152
AlwI GGATC 1 cut(s) 138
AspS9I GGNCC 1 cut(s) 238
AvaII GGWCC 1 cut(s) 238
BccI CCATC 1 cut(s) 118
BfaI CTAG 2 cut(s) 87, 165
BfmI CTRYAG 1 cut(s) 177
Bme18I GGWCC 1 cut(s) 238
BmgT120I GGNCC 1 cut(s) 238
BmiI GGNNCC 1 cut(s) 79
Bse1I ACTGG 1 cut(s) 241
BseMII CTCAG 1 cut(s) 134
BseNI ACTGG 1 cut(s) 241
BsgI GTGCAG 1 cut(s) 141
BslFI GGGAC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 43
Bsp143I GATC 1 cut(s) 130
BspACI CCGC 1 cut(s) 174
BspCNI CTCAG 1 cut(s) 133
BspLI GGNNCC 1 cut(s) 79
BspPI GGATC 1 cut(s) 138
BsrI ACTGG 1 cut(s) 241
BssMI GATC 1 cut(s) 130
Bst4CI ACNGT 1 cut(s) 223
BstDEI CTNAG 2 cut(s) 36, 120
BstKTI GATC 1 cut(s) 133
BstMBI GATC 1 cut(s) 130
BstSFI CTRYAG 1 cut(s) 177
BtsI GCAGTG 1 cut(s) 158
BtsIMutI CAGTG 1 cut(s) 158
Cfr13I GGNCC 1 cut(s) 238
CviAII CATG 1 cut(s) 58
CviJI RGCY 1 cut(s) 152
CviKI_1 RGCY 1 cut(s) 152
DdeI CTNAG 2 cut(s) 36, 120
DpnI GATC 1 cut(s) 132
DpnII GATC 1 cut(s) 130
Eco47I GGWCC 1 cut(s) 238
EcoT22I ATGCAT 1 cut(s) 63
FaeI CATG 1 cut(s) 61
FaiI YATR 4 cut(s) 23, 59, 63, 277
FaqI GGGAC 1 cut(s) 43
FatI CATG 1 cut(s) 57
FspBI CTAG 2 cut(s) 87, 165
Hin1II CATG 1 cut(s) 61
HinfI GANTC 1 cut(s) 40
Hpy188I TCNGA 3 cut(s) 10, 123, 293
HpyAV CCTTC 1 cut(s) 20
HpyCH4III ACNGT 1 cut(s) 223
HpyCH4V TGCA 3 cut(s) 61, 158, 248
HpyF3I CTNAG 2 cut(s) 36, 120
Hsp92II CATG 1 cut(s) 61
Kzo9I GATC 1 cut(s) 130
LmnI GCTCC 2 cut(s) 149, 176
LpnPI CCDG 5 cut(s) 94, 195, 254, 271, 275
MaeI CTAG 2 cut(s) 87, 165
MalI GATC 1 cut(s) 132
MboI GATC 1 cut(s) 130
MluCI AATT 2 cut(s) 46, 202
MlyI GAGTC 1 cut(s) 34
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 1 cut(s) 264
Mph1103I ATGCAT 1 cut(s) 63
MseI TTAA 1 cut(s) 231
MslI CAYNNNNRTG 1 cut(s) 56
NdeII GATC 1 cut(s) 130
NlaIII CATG 1 cut(s) 61
NlaIV GGNNCC 1 cut(s) 79
NsiI ATGCAT 1 cut(s) 63
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
PspN4I GGNNCC 1 cut(s) 79
PspPI GGNCC 1 cut(s) 238
RseI CAYNNNNRTG 1 cut(s) 56
SaqAI TTAA 1 cut(s) 231
Sau3AI GATC 1 cut(s) 130
Sau96I GGNCC 1 cut(s) 238
SchI GAGTC 1 cut(s) 34
SetI ASST 2 cut(s) 139, 154
SfcI CTRYAG 1 cut(s) 177
SinI GGWCC 1 cut(s) 238
SmiMI CAYNNNNRTG 1 cut(s) 56
Sse9I AATT 2 cut(s) 46, 202
SsiI CCGC 1 cut(s) 174
SspMI CTAG 2 cut(s) 87, 165
TaaI ACNGT 1 cut(s) 223
TasI AATT 2 cut(s) 46, 202
Tru1I TTAA 1 cut(s) 231
Tru9I TTAA 1 cut(s) 231
TscAI CASTG 1 cut(s) 165
TspRI CASTG 1 cut(s) 165
VpaK11BI GGWCC 1 cut(s) 238
XspI CTAG 2 cut(s) 87, 165
Zsp2I ATGCAT 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.