Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0128301 RchiOBHm_Chr2g0130981 |
| rosa_laevigata | RLG00000019007 |
| rosa_rugosa | Rorug02G0278900 |
| rosa_samantha | Rh2AG332100 Rh2AG332400 Rh2BG340400 Rh2CG319300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 407 |
| AccB1I | GGYRCC | 1 cut(s) | 407 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 362 |
| AciI | CCGC | 1 cut(s) | 105 |
| AcsI | RAATTY | 1 cut(s) | 256 |
| AcuI | CTGAAG | 1 cut(s) | 216 |
| AfaI | GTAC | 2 cut(s) | 79, 409 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 362 |
| AgsI | TTSAA | 3 cut(s) | 229, 302, 309 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 368, 400 |
| AluBI | AGCT | 1 cut(s) | 368 |
| AluI | AGCT | 1 cut(s) | 368 |
| ApoI | RAATTY | 1 cut(s) | 256 |
| Asp718I | GGTACC | 1 cut(s) | 407 |
| AsuC2I | CCSGG | 1 cut(s) | 184 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| BanI | GGYRCC | 1 cut(s) | 407 |
| BccI | CCATC | 1 cut(s) | 235 |
| BcnI | CCSGG | 1 cut(s) | 184 |
| BisI | GCNGC | 1 cut(s) | 106 |
| BlsI | GCNGC | 1 cut(s) | 107 |
| BmcAI | AGTACT | 1 cut(s) | 79 |
| Bme1390I | CCNGG | 1 cut(s) | 184 |
| BmiI | GGNNCC | 2 cut(s) | 252, 409 |
| BmrFI | CCNGG | 1 cut(s) | 184 |
| BpuMI | CCSGG | 1 cut(s) | 184 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 362 |
| BseGI | GGATG | 2 cut(s) | 67, 246 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 362 |
| BshNI | GGYRCC | 1 cut(s) | 407 |
| BsiSI | CCGG | 1 cut(s) | 183 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 362 |
| BspACI | CCGC | 1 cut(s) | 105 |
| BspLI | GGNNCC | 2 cut(s) | 252, 409 |
| BspT107I | GGYRCC | 1 cut(s) | 407 |
| BstF5I | GGATG | 2 cut(s) | 67, 246 |
| BstNSI | RCATGY | 2 cut(s) | 8, 98 |
| BstSCI | CCNGG | 1 cut(s) | 182 |
| BtsCI | GGATG | 2 cut(s) | 67, 246 |
| BtsIMutI | CAGTG | 1 cut(s) | 411 |
| Csp6I | GTAC | 2 cut(s) | 78, 408 |
| CviAII | CATG | 4 cut(s) | 5, 95, 277, 329 |
| CviJI | RGCY | 1 cut(s) | 368 |
| CviKI_1 | RGCY | 1 cut(s) | 368 |
| CviQI | GTAC | 2 cut(s) | 78, 408 |
| Eco57I | CTGAAG | 1 cut(s) | 216 |
| EcoRI | GAATTC | 1 cut(s) | 256 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 4 cut(s) | 8, 98, 280, 332 |
| FatI | CATG | 4 cut(s) | 4, 94, 276, 328 |
| Fnu4HI | GCNGC | 1 cut(s) | 106 |
| FokI | GGATG | 2 cut(s) | 74, 253 |
| Fsp4HI | GCNGC | 1 cut(s) | 106 |
| GluI | GCNGC | 1 cut(s) | 106 |
| HapII | CCGG | 1 cut(s) | 183 |
| Hin1II | CATG | 4 cut(s) | 8, 98, 280, 332 |
| HpaII | CCGG | 1 cut(s) | 183 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy188I | TCNGA | 3 cut(s) | 45, 196, 375 |
| HpyAV | CCTTC | 1 cut(s) | 191 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 17, 94, 283 |
| Hsp92II | CATG | 4 cut(s) | 8, 98, 280, 332 |
| KpnI | GGTACC | 1 cut(s) | 411 |
| LmnI | GCTCC | 1 cut(s) | 365 |
| LpnPI | CCDG | 3 cut(s) | 3, 196, 198 |
| MaeIII | GTNAC | 2 cut(s) | 116, 262 |
| MluCI | AATT | 4 cut(s) | 39, 245, 256, 401 |
| MnlI | CCTC | 3 cut(s) | 82, 231, 312 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 147, 342 |
| MslI | CAYNNNNRTG | 1 cut(s) | 333 |
| MspI | CCGG | 1 cut(s) | 183 |
| MspR9I | CCNGG | 1 cut(s) | 184 |
| NciI | CCSGG | 1 cut(s) | 184 |
| NlaIII | CATG | 4 cut(s) | 8, 98, 280, 332 |
| NlaIV | GGNNCC | 2 cut(s) | 252, 409 |
| NmuCI | GTSAC | 1 cut(s) | 262 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 8, 98 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 362 |
| PkrI | GCNGC | 1 cut(s) | 107 |
| PspN4I | GGNNCC | 2 cut(s) | 252, 409 |
| RsaI | GTAC | 2 cut(s) | 79, 409 |
| RsaNI | GTAC | 2 cut(s) | 78, 408 |
| RseI | CAYNNNNRTG | 1 cut(s) | 333 |
| SaqAI | TTAA | 2 cut(s) | 147, 342 |
| SatI | GCNGC | 1 cut(s) | 106 |
| ScaI | AGTACT | 1 cut(s) | 79 |
| ScrFI | CCNGG | 1 cut(s) | 184 |
| SetI | ASST | 3 cut(s) | 93, 370, 409 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 333 |
| Sse9I | AATT | 4 cut(s) | 39, 245, 256, 401 |
| SsiI | CCGC | 1 cut(s) | 105 |
| StyD4I | CCNGG | 1 cut(s) | 182 |
| TaqI | TCGA | 1 cut(s) | 173 |
| TasI | AATT | 4 cut(s) | 39, 245, 256, 401 |
| TatI | WGTACW | 1 cut(s) | 77 |
| TauI | GCSGC | 1 cut(s) | 108 |
| Tru1I | TTAA | 2 cut(s) | 147, 342 |
| Tru9I | TTAA | 2 cut(s) | 147, 342 |
| TscAI | CASTG | 1 cut(s) | 418 |
| TseFI | GTSAC | 1 cut(s) | 262 |
| Tsp45I | GTSAC | 1 cut(s) | 262 |
| TspDTI | ATGAA | 4 cut(s) | 17, 153, 246, 317 |
| TspRI | CASTG | 1 cut(s) | 418 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 362 |
| XapI | RAATTY | 1 cut(s) | 256 |
| XceI | RCATGY | 2 cut(s) | 8, 98 |
| ZrmI | AGTACT | 1 cut(s) | 79 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |