Sodium/calcium exchanger protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g26990 FvH4_6g26990 FvH4_6g26990 FvH4_6g26990 |
| malus_domestica | MD17G1233800.v1.1 |
| prunus_persica | Prupe.3G125200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0128851 |
| rosa_laevigata | RLG00000019033 |
| rosa_multiflora | Rmu_sc0001643.1_g000033 |
| rosa_roxburghii | Rroxscaffold_2G00115170 |
| rosa_rugosa | Rorug02G0281800 Rorug02G0281800 |
| rosa_samantha | Rh2AG334300 Rh2CG321200 Rh2DG359000 |
| rosa_wichuraiana | Rw2G027040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1601 |
| AccI | GTMKAC | 1 cut(s) | 1551 |
| AccII | CGCG | 1 cut(s) | 854 |
| AciI | CCGC | 1 cut(s) | 1639 |
| AclWI | GGATC | 8 cut(s) | 459, 472, 589, 632, 878, 1230, 1322, 1507 |
| AcoI | YGGCCR | 1 cut(s) | 67 |
| AcsI | RAATTY | 5 cut(s) | 145, 318, 532, 1082, 1095 |
| AfaI | GTAC | 2 cut(s) | 372, 1284 |
| AfeI | AGCGCT | 1 cut(s) | 1680 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1150, 1528 |
| AgsI | TTSAA | 7 cut(s) | 100, 530, 844, 949, 1090, 1101, 1718 |
| AjnI | CCWGG | 2 cut(s) | 328, 1527 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 697, 729, 1710 |
| Alw21I | GWGCWC | 1 cut(s) | 596 |
| Alw26I | GTCTC | 5 cut(s) | 188, 350, 442, 1035, 1393 |
| AlwI | GGATC | 8 cut(s) | 459, 472, 589, 632, 878, 1230, 1322, 1507 |
| Aor51HI | AGCGCT | 1 cut(s) | 1680 |
| AoxI | GGCC | 2 cut(s) | 67, 1479 |
| ApeKI | GCWGC | 5 cut(s) | 313, 617, 1127, 1130, 1313 |
| ApoI | RAATTY | 5 cut(s) | 145, 318, 532, 1082, 1095 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1578, 1610 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 911 |
| AspLEI | GCGC | 2 cut(s) | 856, 1681 |
| AspS9I | GGNCC | 3 cut(s) | 326, 498, 1141 |
| AsuHPI | GGTGA | 1 cut(s) | 893 |
| AsuII | TTCGAA | 2 cut(s) | 1064, 1558 |
| AsuNHI | GCTAGC | 1 cut(s) | 457 |
| AvaII | GGWCC | 3 cut(s) | 326, 498, 1141 |
| BalI | TGGCCA | 1 cut(s) | 69 |
| BamHI | GGATCC | 1 cut(s) | 464 |
| BauI | CACGAG | 1 cut(s) | 1056 |
| BbsI | GAAGAC | 2 cut(s) | 497, 796 |
| Bbv12I | GWGCWC | 1 cut(s) | 596 |
| BbvI | GCAGC | 5 cut(s) | 300, 604, 1114, 1117, 1300 |
| BccI | CCATC | 5 cut(s) | 47, 107, 872, 932, 1132 |
| BceAI | ACGGC | 2 cut(s) | 432, 438 |
| BciT130I | CCWGG | 2 cut(s) | 330, 1529 |
| BclI | TGATCA | 1 cut(s) | 925 |
| BcoDI | GTCTC | 5 cut(s) | 188, 350, 442, 1035, 1393 |
| BfaI | CTAG | 3 cut(s) | 47, 458, 509 |
| BfmI | CTRYAG | 1 cut(s) | 1674 |
| BfoI | RGCGCY | 1 cut(s) | 1682 |
| BglII | AGATCT | 1 cut(s) | 965 |
| BisI | GCNGC | 5 cut(s) | 314, 618, 1128, 1131, 1314 |
| BlpI | GCTNAGC | 2 cut(s) | 1119, 1155 |
| BlsI | GCNGC | 5 cut(s) | 315, 619, 1129, 1132, 1315 |
| BmcAI | AGTACT | 1 cut(s) | 1284 |
| Bme1390I | CCNGG | 2 cut(s) | 330, 1529 |
| Bme18I | GGWCC | 3 cut(s) | 326, 498, 1141 |
| BmgT120I | GGNCC | 3 cut(s) | 326, 498, 1141 |
| BmiI | GGNNCC | 3 cut(s) | 466, 499, 1303 |
| BmrFI | CCNGG | 2 cut(s) | 330, 1529 |
| BmrI | ACTGGG | 1 cut(s) | 141 |
| BmsI | GCATC | 6 cut(s) | 185, 367, 404, 762, 1330, 1481 |
| BmtI | GCTAGC | 1 cut(s) | 461 |
| BmuI | ACTGGG | 1 cut(s) | 141 |
| BpiI | GAAGAC | 2 cut(s) | 497, 796 |
| BpmI | CTGGAG | 2 cut(s) | 606, 1402 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1119, 1155 |
| Bpu14I | TTCGAA | 2 cut(s) | 1064, 1558 |
| BpuEI | CTTGAG | 2 cut(s) | 654, 1014 |
| Bsa29I | ATCGAT | 1 cut(s) | 1014 |
| BsaBI | GATNNNNATC | 1 cut(s) | 882 |
| BsaI | GGTCTC | 2 cut(s) | 350, 442 |
| BsaJI | CCNNGG | 4 cut(s) | 229, 773, 1144, 1527 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1508, 1538 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1150, 1528 |
| Bse1I | ACTGG | 3 cut(s) | 136, 583, 1419 |
| Bse3DI | GCAATG | 1 cut(s) | 1140 |
| Bse8I | GATNNNNATC | 1 cut(s) | 882 |
| BseBI | CCWGG | 2 cut(s) | 330, 1529 |
| BseCI | ATCGAT | 1 cut(s) | 1014 |
| BseDI | CCNNGG | 4 cut(s) | 229, 773, 1144, 1527 |
| BseGI | GGATG | 4 cut(s) | 943, 1252, 1518, 1665 |
| BseJI | GATNNNNATC | 1 cut(s) | 882 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1150, 1528 |
| BseMI | GCAATG | 1 cut(s) | 1140 |
| BseMII | CTCAG | 1 cut(s) | 1169 |
| BseNI | ACTGG | 3 cut(s) | 136, 583, 1419 |
| BseXI | GCAGC | 5 cut(s) | 300, 604, 1114, 1117, 1300 |
| Bsh1236I | CGCG | 1 cut(s) | 854 |
| BshFI | GGCC | 2 cut(s) | 69, 1481 |
| BshVI | ATCGAT | 1 cut(s) | 1014 |
| BsiHKAI | GWGCWC | 1 cut(s) | 596 |
| BsiSI | CCGG | 1 cut(s) | 1453 |
| BslFI | GGGAC | 2 cut(s) | 425, 511 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1150, 1528 |
| BsmAI | GTCTC | 5 cut(s) | 188, 350, 442, 1035, 1393 |
| BsmBI | CGTCTC | 1 cut(s) | 1393 |
| BsmFI | GGGAC | 2 cut(s) | 425, 511 |
| BsmI | GAATGC | 1 cut(s) | 1611 |
| BsnI | GGCC | 2 cut(s) | 69, 1481 |
| Bso31I | GGTCTC | 2 cut(s) | 350, 442 |
| Bsp119I | TTCGAA | 2 cut(s) | 1064, 1558 |
| Bsp1286I | GDGCHC | 1 cut(s) | 596 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1119, 1155 |
| BspACI | CCGC | 1 cut(s) | 1639 |
| BspANI | GGCC | 2 cut(s) | 69, 1481 |
| BspCNI | CTCAG | 1 cut(s) | 1168 |
| BspDI | ATCGAT | 1 cut(s) | 1014 |
| BspFNI | CGCG | 1 cut(s) | 854 |
| BspLI | GGNNCC | 3 cut(s) | 466, 499, 1303 |
| BspOI | GCTAGC | 1 cut(s) | 461 |
| BspPI | GGATC | 8 cut(s) | 459, 472, 589, 632, 878, 1230, 1322, 1507 |
| BspT104I | TTCGAA | 2 cut(s) | 1064, 1558 |
| BspTNI | GGTCTC | 2 cut(s) | 350, 442 |
| BsrDI | GCAATG | 1 cut(s) | 1140 |
| BsrI | ACTGG | 3 cut(s) | 136, 583, 1419 |
| BssECI | CCNNGG | 4 cut(s) | 229, 773, 1144, 1527 |
| BssNAI | GTATAC | 1 cut(s) | 1552 |
| BssSI | CACGAG | 1 cut(s) | 1056 |
| BssT1I | CCWWGG | 2 cut(s) | 229, 773 |
| Bst1107I | GTATAC | 1 cut(s) | 1552 |
| Bst2BI | CACGAG | 1 cut(s) | 1056 |
| Bst2UI | CCWGG | 2 cut(s) | 330, 1529 |
| Bst4CI | ACNGT | 3 cut(s) | 226, 840, 1173 |
| Bst6I | CTCTTC | 2 cut(s) | 353, 779 |
| BstBI | TTCGAA | 2 cut(s) | 1064, 1558 |
| BstC8I | GCNNGC | 5 cut(s) | 455, 459, 701, 1125, 1269 |
| BstDEI | CTNAG | 3 cut(s) | 710, 1119, 1155 |
| BstDSI | CCRYGG | 1 cut(s) | 1144 |
| BstF5I | GGATG | 4 cut(s) | 943, 1252, 1518, 1665 |
| BstFNI | CGCG | 1 cut(s) | 854 |
| BstH2I | RGCGCY | 1 cut(s) | 1682 |
| BstHHI | GCGC | 2 cut(s) | 856, 1681 |
| BstMAI | GTCTC | 5 cut(s) | 188, 350, 442, 1035, 1393 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 1124, 1277, 1322, 1478, 1487 |
| BstNI | CCWGG | 2 cut(s) | 330, 1529 |
| BstNSI | RCATGY | 2 cut(s) | 818, 1271 |
| BstSCI | CCNGG | 2 cut(s) | 328, 1527 |
| BstSFI | CTRYAG | 1 cut(s) | 1674 |
| BstUI | CGCG | 1 cut(s) | 854 |
| BstV1I | GCAGC | 5 cut(s) | 300, 604, 1114, 1117, 1300 |
| BstV2I | GAAGAC | 2 cut(s) | 497, 796 |
| BstX2I | RGATCY | 3 cut(s) | 464, 581, 965 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 131 |
| BstYI | RGATCY | 3 cut(s) | 464, 581, 965 |
| BstZ17I | GTATAC | 1 cut(s) | 1552 |
| Bsu15I | ATCGAT | 1 cut(s) | 1014 |
| BsuRI | GGCC | 2 cut(s) | 69, 1481 |
| BsuTUI | ATCGAT | 1 cut(s) | 1014 |
| BtgI | CCRYGG | 1 cut(s) | 1144 |
| BtsCI | GGATG | 4 cut(s) | 943, 1252, 1518, 1665 |
| BtsI | GCAGTG | 2 cut(s) | 678, 1539 |
| BtsIMutI | CAGTG | 3 cut(s) | 678, 1426, 1539 |
| Cac8I | GCNNGC | 5 cut(s) | 455, 459, 701, 1125, 1269 |
| CfoI | GCGC | 2 cut(s) | 856, 1681 |
| Cfr13I | GGNCC | 3 cut(s) | 326, 498, 1141 |
| ClaI | ATCGAT | 1 cut(s) | 1014 |
| CsiI | ACCWGGT | 1 cut(s) | 328 |
| Csp6I | GTAC | 2 cut(s) | 371, 1283 |
| CviAII | CATG | 7 cut(s) | 43, 213, 621, 628, 815, 1268, 1569 |
| CviQI | GTAC | 2 cut(s) | 371, 1283 |
| DdeI | CTNAG | 3 cut(s) | 710, 1119, 1155 |
| EaeI | YGGCCR | 1 cut(s) | 67 |
| Eam1104I | CTCTTC | 2 cut(s) | 353, 779 |
| EarI | CTCTTC | 2 cut(s) | 353, 779 |
| Eco130I | CCWWGG | 2 cut(s) | 229, 773 |
| Eco31I | GGTCTC | 2 cut(s) | 350, 442 |
| Eco47I | GGWCC | 3 cut(s) | 326, 498, 1141 |
| Eco47III | AGCGCT | 1 cut(s) | 1680 |
| EcoO109I | RGGNCCY | 2 cut(s) | 326, 498 |
| EcoRII | CCWGG | 2 cut(s) | 328, 1527 |
| EcoT14I | CCWWGG | 2 cut(s) | 229, 773 |
| ErhI | CCWWGG | 2 cut(s) | 229, 773 |
| Esp3I | CGTCTC | 1 cut(s) | 1393 |
| FaeI | CATG | 7 cut(s) | 46, 216, 624, 631, 818, 1271, 1572 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 152, 184 |
| FaqI | GGGAC | 2 cut(s) | 425, 511 |
| FatI | CATG | 7 cut(s) | 42, 212, 620, 627, 814, 1267, 1568 |
| FauNDI | CATATG | 2 cut(s) | 199, 799 |
| FbaI | TGATCA | 1 cut(s) | 925 |
| FblI | GTMKAC | 1 cut(s) | 1551 |
| Fnu4HI | GCNGC | 5 cut(s) | 314, 618, 1128, 1131, 1314 |
| FokI | GGATG | 4 cut(s) | 950, 1259, 1505, 1672 |
| Fsp4HI | GCNGC | 5 cut(s) | 314, 618, 1128, 1131, 1314 |
| FspBI | CTAG | 3 cut(s) | 47, 458, 509 |
| GlaI | GCGC | 2 cut(s) | 855, 1680 |
| GluI | GCNGC | 5 cut(s) | 314, 618, 1128, 1131, 1314 |
| GsuI | CTGGAG | 2 cut(s) | 606, 1402 |
| HaeII | RGCGCY | 1 cut(s) | 1682 |
| HaeIII | GGCC | 2 cut(s) | 69, 1481 |
| HapII | CCGG | 1 cut(s) | 1453 |
| HhaI | GCGC | 2 cut(s) | 856, 1681 |
| Hin1II | CATG | 7 cut(s) | 46, 216, 624, 631, 818, 1271, 1572 |
| Hin6I | GCGC | 2 cut(s) | 854, 1679 |
| HinP1I | GCGC | 2 cut(s) | 854, 1679 |
| HincII | GTYRAC | 1 cut(s) | 1348 |
| HindII | GTYRAC | 1 cut(s) | 1348 |
| HinfI | GANTC | 6 cut(s) | 204, 307, 778, 829, 981, 1061 |
| HpaII | CCGG | 1 cut(s) | 1453 |
| HphI | GGTGA | 1 cut(s) | 893 |
| Hpy166II | GTNNAC | 6 cut(s) | 121, 716, 1348, 1434, 1552, 1708 |
| Hpy188III | TCNNGA | 5 cut(s) | 399, 585, 916, 1058, 1715 |
| Hpy8I | GTNNAC | 6 cut(s) | 121, 716, 1348, 1434, 1552, 1708 |
| HpyAV | CCTTC | 1 cut(s) | 1657 |
| HpyCH4III | ACNGT | 3 cut(s) | 226, 840, 1173 |
| HpyCH4IV | ACGT | 1 cut(s) | 999 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 1124, 1277, 1322, 1478, 1487 |
| HpyF3I | CTNAG | 3 cut(s) | 710, 1119, 1155 |
| HpySE526I | ACGT | 1 cut(s) | 999 |
| Hsp92II | CATG | 7 cut(s) | 46, 216, 624, 631, 818, 1271, 1572 |
| HspAI | GCGC | 2 cut(s) | 854, 1679 |
| Ksp22I | TGATCA | 1 cut(s) | 925 |
| LmnI | GCTCC | 2 cut(s) | 1421, 1572 |
| Lsp1109I | GCAGC | 5 cut(s) | 300, 604, 1114, 1117, 1300 |
| LweI | GCATC | 6 cut(s) | 185, 367, 404, 762, 1330, 1481 |
| MabI | ACCWGGT | 1 cut(s) | 328 |
| MaeI | CTAG | 3 cut(s) | 47, 458, 509 |
| MaeII | ACGT | 1 cut(s) | 999 |
| MaeIII | GTNAC | 5 cut(s) | 92, 260, 521, 1504, 1514 |
| MboII | GAAGA | 9 cut(s) | 232, 340, 497, 796, 801, 1078, 1214, 1375, 1468 |
| MflI | RGATCY | 3 cut(s) | 464, 581, 965 |
| MhlI | GDGCHC | 1 cut(s) | 596 |
| MlsI | TGGCCA | 1 cut(s) | 69 |
| MluNI | TGGCCA | 1 cut(s) | 69 |
| MmeI | TCCRAC | 2 cut(s) | 424, 685 |
| MnlI | CCTC | 6 cut(s) | 254, 366, 678, 1237, 1282, 1532 |
| Mox20I | TGGCCA | 1 cut(s) | 69 |
| MroXI | GAANNNNTTC | 1 cut(s) | 911 |
| MscI | TGGCCA | 1 cut(s) | 69 |
| MseI | TTAA | 6 cut(s) | 51, 158, 575, 962, 1110, 1251 |
| MslI | CAYNNNNRTG | 2 cut(s) | 813, 1616 |
| Msp20I | TGGCCA | 1 cut(s) | 69 |
| MspA1I | CMGCKG | 1 cut(s) | 296 |
| MspI | CCGG | 1 cut(s) | 1453 |
| MspR9I | CCNGG | 2 cut(s) | 330, 1529 |
| Mva1269I | GAATGC | 1 cut(s) | 1611 |
| MvaI | CCWGG | 2 cut(s) | 330, 1529 |
| MvnI | CGCG | 1 cut(s) | 854 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 1124, 1277, 1322, 1478, 1487 |
| NdeI | CATATG | 2 cut(s) | 199, 799 |
| NheI | GCTAGC | 1 cut(s) | 457 |
| NlaIII | CATG | 7 cut(s) | 46, 216, 624, 631, 818, 1271, 1572 |
| NlaIV | GGNNCC | 3 cut(s) | 466, 499, 1303 |
| NmuCI | GTSAC | 2 cut(s) | 92, 521 |
| NspI | RCATGY | 2 cut(s) | 818, 1271 |
| NspV | TTCGAA | 2 cut(s) | 1064, 1558 |
| PaeI | GCATGC | 1 cut(s) | 1271 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1020 |
| PctI | GAATGC | 1 cut(s) | 1611 |
| PdmI | GAANNNNTTC | 1 cut(s) | 911 |
| PfeI | GAWTC | 6 cut(s) | 204, 307, 778, 829, 981, 1061 |
| PkrI | GCNGC | 5 cut(s) | 315, 619, 1129, 1132, 1315 |
| PpuMI | RGGWCCY | 2 cut(s) | 326, 498 |
| PsiI | TTATAA | 1 cut(s) | 1601 |
| Psp5II | RGGWCCY | 2 cut(s) | 326, 498 |
| Psp6I | CCWGG | 2 cut(s) | 328, 1527 |
| PspGI | CCWGG | 2 cut(s) | 328, 1527 |
| PspN4I | GGNNCC | 3 cut(s) | 466, 499, 1303 |
| PspPI | GGNCC | 3 cut(s) | 326, 498, 1141 |
| PspPPI | RGGWCCY | 2 cut(s) | 326, 498 |
| PsuI | RGATCY | 3 cut(s) | 464, 581, 965 |
| PvuII | CAGCTG | 1 cut(s) | 296 |
| RsaI | GTAC | 2 cut(s) | 372, 1284 |
| RsaNI | GTAC | 2 cut(s) | 371, 1283 |
| RseI | CAYNNNNRTG | 2 cut(s) | 813, 1616 |
| SaqAI | TTAA | 6 cut(s) | 51, 158, 575, 962, 1110, 1251 |
| SatI | GCNGC | 5 cut(s) | 314, 618, 1128, 1131, 1314 |
| Sau96I | GGNCC | 3 cut(s) | 326, 498, 1141 |
| ScaI | AGTACT | 1 cut(s) | 1284 |
| ScrFI | CCNGG | 2 cut(s) | 330, 1529 |
| SduI | GDGCHC | 1 cut(s) | 596 |
| SexAI | ACCWGGT | 1 cut(s) | 328 |
| SfaNI | GCATC | 6 cut(s) | 185, 367, 404, 762, 1330, 1481 |
| SfcI | CTRYAG | 1 cut(s) | 1674 |
| SfuI | TTCGAA | 2 cut(s) | 1064, 1558 |
| SinI | GGWCC | 3 cut(s) | 326, 498, 1141 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 813, 1616 |
| SmlI | CTYRAG | 2 cut(s) | 669, 1029 |
| SmoI | CTYRAG | 2 cut(s) | 669, 1029 |
| SphI | GCATGC | 1 cut(s) | 1271 |
| SsiI | CCGC | 1 cut(s) | 1639 |
| SspMI | CTAG | 3 cut(s) | 47, 458, 509 |
| StyD4I | CCNGG | 2 cut(s) | 328, 1527 |
| StyI | CCWWGG | 2 cut(s) | 229, 773 |
| TaaI | ACNGT | 3 cut(s) | 226, 840, 1173 |
| TaiI | ACGT | 1 cut(s) | 1002 |
| TaqI | TCGA | 3 cut(s) | 1014, 1064, 1558 |
| TatI | WGTACW | 1 cut(s) | 1282 |
| TfiI | GAWTC | 6 cut(s) | 204, 307, 778, 829, 981, 1061 |
| Tru1I | TTAA | 6 cut(s) | 51, 158, 575, 962, 1110, 1251 |
| Tru9I | TTAA | 6 cut(s) | 51, 158, 575, 962, 1110, 1251 |
| TscAI | CASTG | 3 cut(s) | 685, 1426, 1539 |
| TseFI | GTSAC | 2 cut(s) | 92, 521 |
| TseI | GCWGC | 5 cut(s) | 313, 617, 1127, 1130, 1313 |
| Tsp45I | GTSAC | 2 cut(s) | 92, 521 |
| TspDTI | ATGAA | 4 cut(s) | 564, 1032, 1095, 1181 |
| TspGWI | ACGGA | 2 cut(s) | 430, 1133 |
| TspRI | CASTG | 3 cut(s) | 685, 1426, 1539 |
| VpaK11BI | GGWCC | 3 cut(s) | 326, 498, 1141 |
| XapI | RAATTY | 5 cut(s) | 145, 318, 532, 1082, 1095 |
| XceI | RCATGY | 2 cut(s) | 818, 1271 |
| XmiI | GTMKAC | 1 cut(s) | 1551 |
| XmnI | GAANNNNTTC | 1 cut(s) | 911 |
| XspI | CTAG | 3 cut(s) | 47, 458, 509 |
| ZrmI | AGTACT | 1 cut(s) | 1284 |