exocyst complex component
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G54090 AT1G72470 AT3G14090 |
| fragaria_vesca | FvH4_6g35110 |
| malus_domestica | MD17G1164500.v1.1 |
| prunus_persica | Prupe.3G038000_v2.0.a1 Prupe.3G038000_v2.0.a1 |
| pyrus_communis | pycom09g09710 pycom17g15760 |
| rosa_chinensis | RchiOBHm_Chr2g0146331 |
| rosa_laevigata | RLG00000020194 |
| rosa_multiflora | Rmu_co8454727.1_g000001 Rmu_sc0004094.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00100170 |
| rosa_rugosa | Rorug02G0394100 |
| rosa_samantha | Rh2AG450500 Rh2BG462800 Rh2CG437300 Rh2DG471900 Rh3BG270800 |
| rosa_wichuraiana | Rw2G036770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1197 |
| AatII | GACGTC | 1 cut(s) | 705 |
| Acc65I | GGTACC | 2 cut(s) | 1129, 1690 |
| AccB1I | GGYRCC | 3 cut(s) | 830, 1129, 1690 |
| AccBSI | CCGCTC | 2 cut(s) | 586, 924 |
| AccI | GTMKAC | 2 cut(s) | 408, 627 |
| AccII | CGCG | 5 cut(s) | 41, 120, 483, 756, 1246 |
| AccIII | TCCGGA | 1 cut(s) | 1804 |
| AclWI | GGATC | 7 cut(s) | 59, 323, 733, 785, 874, 1253, 1738 |
| AcoI | YGGCCR | 2 cut(s) | 1038, 1768 |
| AcsI | RAATTY | 1 cut(s) | 398 |
| AcuI | CTGAAG | 1 cut(s) | 698 |
| AcyI | GRCGYC | 3 cut(s) | 324, 702, 846 |
| AfaI | GTAC | 4 cut(s) | 1131, 1141, 1250, 1692 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 246, 774, 1133, 1158, 1238, 1245, 1458, 1707, 1708 |
| AflIII | ACRYGT | 1 cut(s) | 1579 |
| AgsI | TTSAA | 8 cut(s) | 254, 892, 943, 1094, 1210, 1611, 1636, 1865 |
| AhlI | ACTAGT | 1 cut(s) | 1520 |
| AjnI | CCWGG | 3 cut(s) | 621, 819, 1851 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1292, 1324 |
| Alw21I | GWGCWC | 4 cut(s) | 36, 474, 537, 729 |
| Alw26I | GTCTC | 2 cut(s) | 854, 1048 |
| AlwI | GGATC | 7 cut(s) | 59, 323, 733, 785, 874, 1253, 1738 |
| Ama87I | CYCGRG | 4 cut(s) | 90, 502, 728, 929 |
| Aor13HI | TCCGGA | 1 cut(s) | 1804 |
| ApaI | GGGCCC | 1 cut(s) | 875 |
| ApeKI | GCWGC | 3 cut(s) | 633, 1514, 1717 |
| ApoI | RAATTY | 1 cut(s) | 398 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 390, 422, 983, 1015 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 938 |
| Asp718I | GGTACC | 2 cut(s) | 1129, 1690 |
| AspLEI | GCGC | 2 cut(s) | 99, 758 |
| AspS9I | GGNCC | 6 cut(s) | 88, 513, 871, 872, 1446, 1758 |
| AsuC2I | CCSGG | 7 cut(s) | 91, 92, 333, 530, 875, 1134, 1240 |
| AsuHPI | GGTGA | 6 cut(s) | 3, 304, 571, 1139, 1268, 1555 |
| AsuII | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| AvaI | CYCGRG | 4 cut(s) | 90, 502, 728, 929 |
| AvaII | GGWCC | 3 cut(s) | 513, 1446, 1758 |
| BaeGI | GKGCMC | 1 cut(s) | 875 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1240, 1273 |
| BanI | GGYRCC | 3 cut(s) | 830, 1129, 1690 |
| BanII | GRGCYC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| BbsI | GAAGAC | 3 cut(s) | 261, 775, 1307 |
| Bbv12I | GWGCWC | 4 cut(s) | 36, 474, 537, 729 |
| BbvI | GCAGC | 3 cut(s) | 645, 1526, 1704 |
| BccI | CCATC | 8 cut(s) | 236, 302, 845, 914, 1240, 1352, 1658, 1736 |
| BceAI | ACGGC | 5 cut(s) | 131, 448, 646, 1085, 1099 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 88, 122, 374, 408, 760, 794, 820, 854 |
| BciT130I | CCWGG | 3 cut(s) | 623, 821, 1853 |
| BciVI | GTATCC | 2 cut(s) | 744, 1862 |
| BcnI | CCSGG | 7 cut(s) | 91, 92, 333, 530, 875, 1134, 1240 |
| BcoDI | GTCTC | 2 cut(s) | 854, 1048 |
| BcuI | ACTAGT | 1 cut(s) | 1520 |
| BfaI | CTAG | 3 cut(s) | 246, 674, 1521 |
| BfmI | CTRYAG | 2 cut(s) | 508, 520 |
| BfuI | GTATCC | 2 cut(s) | 744, 1862 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 764 |
| BglII | AGATCT | 2 cut(s) | 1044, 1898 |
| BlpI | GCTNAGC | 1 cut(s) | 689 |
| Bme18I | GGWCC | 3 cut(s) | 513, 1446, 1758 |
| BmeT110I | CYCGRG | 4 cut(s) | 90, 502, 728, 929 |
| BmgT120I | GGNCC | 6 cut(s) | 88, 513, 871, 872, 1446, 1758 |
| BmsI | GCATC | 9 cut(s) | 86, 534, 544, 627, 780, 834, 921, 1372, 1810 |
| BpiI | GAAGAC | 3 cut(s) | 261, 775, 1307 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 290, 322 |
| BpmI | CTGGAG | 1 cut(s) | 337 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1706 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 689 |
| Bpu14I | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| BpuEI | CTTGAG | 3 cut(s) | 628, 1504, 1659 |
| BpuMI | CCSGG | 7 cut(s) | 91, 92, 333, 530, 875, 1134, 1240 |
| BsaHI | GRCGYC | 3 cut(s) | 324, 702, 846 |
| BsaI | GGTCTC | 1 cut(s) | 854 |
| BsaJI | CCNNGG | 8 cut(s) | 90, 198, 240, 481, 762, 820, 900, 1308 |
| BsaWI | WCCGGW | 3 cut(s) | 1126, 1253, 1804 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 272, 302, 350, 380, 401, 431 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 246, 774, 1133, 1158, 1238, 1245, 1458, 1707, 1708 |
| Bse118I | RCCGGY | 2 cut(s) | 599, 1770 |
| Bse1I | ACTGG | 1 cut(s) | 1062 |
| BseAI | TCCGGA | 1 cut(s) | 1804 |
| BseBI | CCWGG | 3 cut(s) | 623, 821, 1853 |
| BseDI | CCNNGG | 8 cut(s) | 90, 198, 240, 481, 762, 820, 900, 1308 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 246, 774, 1133, 1158, 1238, 1245, 1458, 1707, 1708 |
| BseMII | CTCAG | 2 cut(s) | 72, 703 |
| BseNI | ACTGG | 1 cut(s) | 1062 |
| BseSI | GKGCMC | 1 cut(s) | 875 |
| BseX3I | CGGCCG | 1 cut(s) | 1038 |
| BseXI | GCAGC | 3 cut(s) | 645, 1526, 1704 |
| BseYI | CCCAGC | 3 cut(s) | 63, 1701, 1881 |
| Bsh1236I | CGCG | 5 cut(s) | 41, 120, 483, 756, 1246 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1041 |
| BshNI | GGYRCC | 3 cut(s) | 830, 1129, 1690 |
| BsiEI | CGRYCG | 1 cut(s) | 1041 |
| BsiHKAI | GWGCWC | 4 cut(s) | 36, 474, 537, 729 |
| BsiHKCI | CYCGRG | 4 cut(s) | 90, 502, 728, 929 |
| BslFI | GGGAC | 3 cut(s) | 80, 1432, 1864 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 246, 774, 1133, 1158, 1238, 1245, 1458, 1707, 1708 |
| BsmAI | GTCTC | 2 cut(s) | 854, 1048 |
| BsmFI | GGGAC | 3 cut(s) | 80, 1432, 1864 |
| Bso31I | GGTCTC | 1 cut(s) | 854 |
| BsoBI | CYCGRG | 4 cut(s) | 90, 502, 728, 929 |
| Bsp119I | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| Bsp120I | GGGCCC | 1 cut(s) | 871 |
| Bsp1286I | GDGCHC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| Bsp13I | TCCGGA | 1 cut(s) | 1804 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 689 |
| Bsp19I | CCATGG | 1 cut(s) | 240 |
| BspCNI | CTCAG | 2 cut(s) | 73, 702 |
| BspEI | TCCGGA | 1 cut(s) | 1804 |
| BspFNI | CGCG | 5 cut(s) | 41, 120, 483, 756, 1246 |
| BspPI | GGATC | 7 cut(s) | 59, 323, 733, 785, 874, 1253, 1738 |
| BspQI | GCTCTTC | 2 cut(s) | 893, 944 |
| BspT104I | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| BspT107I | GGYRCC | 3 cut(s) | 830, 1129, 1690 |
| BspTNI | GGTCTC | 1 cut(s) | 854 |
| BsrBI | CCGCTC | 2 cut(s) | 586, 924 |
| BsrFI | RCCGGY | 2 cut(s) | 599, 1770 |
| BsrI | ACTGG | 1 cut(s) | 1062 |
| BssAI | RCCGGY | 2 cut(s) | 599, 1770 |
| BssECI | CCNNGG | 8 cut(s) | 90, 198, 240, 481, 762, 820, 900, 1308 |
| BssNI | GRCGYC | 3 cut(s) | 324, 702, 846 |
| BssT1I | CCWWGG | 3 cut(s) | 240, 762, 1308 |
| Bst2UI | CCWGG | 3 cut(s) | 623, 821, 1853 |
| Bst4CI | ACNGT | 2 cut(s) | 747, 865 |
| Bst6I | CTCTTC | 3 cut(s) | 893, 944, 1603 |
| BstACI | GRCGYC | 3 cut(s) | 324, 702, 846 |
| BstBI | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| BstC8I | GCNNGC | 9 cut(s) | 144, 210, 601, 769, 790, 809, 850, 926, 1512 |
| BstDEI | CTNAG | 5 cut(s) | 81, 689, 1368, 1457, 1706 |
| BstDSI | CCRYGG | 2 cut(s) | 240, 481 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 772 |
| BstFNI | CGCG | 5 cut(s) | 41, 120, 483, 756, 1246 |
| BstHHI | GCGC | 2 cut(s) | 99, 758 |
| BstMAI | GTCTC | 2 cut(s) | 854, 1048 |
| BstMCI | CGRYCG | 1 cut(s) | 1041 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 185, 214, 764, 808, 918, 934, 1067, 1111, 1391 |
| BstNI | CCWGG | 3 cut(s) | 623, 821, 1853 |
| BstNSI | RCATGY | 1 cut(s) | 1583 |
| BstSFI | CTRYAG | 2 cut(s) | 508, 520 |
| BstSLI | GKGCMC | 1 cut(s) | 875 |
| BstUI | CGCG | 5 cut(s) | 41, 120, 483, 756, 1246 |
| BstV1I | GCAGC | 3 cut(s) | 645, 1526, 1704 |
| BstV2I | GAAGAC | 3 cut(s) | 261, 775, 1307 |
| BstX2I | RGATCY | 3 cut(s) | 738, 1044, 1898 |
| BstYI | RGATCY | 3 cut(s) | 738, 1044, 1898 |
| BstZI | CGGCCG | 1 cut(s) | 1038 |
| BsuI | GTATCC | 2 cut(s) | 744, 1862 |
| BtgI | CCRYGG | 2 cut(s) | 240, 481 |
| BtgZI | GCGATG | 1 cut(s) | 562 |
| BtsIMutI | CAGTG | 1 cut(s) | 722 |
| Cac8I | GCNNGC | 9 cut(s) | 144, 210, 601, 769, 790, 809, 850, 926, 1512 |
| CfoI | GCGC | 2 cut(s) | 99, 758 |
| Cfr10I | RCCGGY | 2 cut(s) | 599, 1770 |
| Cfr13I | GGNCC | 6 cut(s) | 88, 513, 871, 872, 1446, 1758 |
| Cfr42I | CCGCGG | 1 cut(s) | 484 |
| Cfr9I | CCCGGG | 1 cut(s) | 90 |
| CseI | GACGC | 5 cut(s) | 47, 313, 625, 854, 971 |
| Csp6I | GTAC | 4 cut(s) | 1130, 1140, 1249, 1691 |
| CviAII | CATG | 7 cut(s) | 100, 169, 241, 377, 856, 959, 1580 |
| CviQI | GTAC | 4 cut(s) | 1130, 1140, 1249, 1691 |
| DdeI | CTNAG | 5 cut(s) | 81, 689, 1368, 1457, 1706 |
| EaeI | YGGCCR | 2 cut(s) | 1038, 1768 |
| EagI | CGGCCG | 1 cut(s) | 1038 |
| Eam1104I | CTCTTC | 3 cut(s) | 893, 944, 1603 |
| EarI | CTCTTC | 3 cut(s) | 893, 944, 1603 |
| EciI | GGCGGA | 7 cut(s) | 59, 163, 214, 409, 451, 467, 1076 |
| Ecl136II | GAGCTC | 4 cut(s) | 34, 472, 535, 727 |
| EclXI | CGGCCG | 1 cut(s) | 1038 |
| Eco130I | CCWWGG | 3 cut(s) | 240, 762, 1308 |
| Eco147I | AGGCCT | 1 cut(s) | 767 |
| Eco24I | GRGCYC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| Eco31I | GGTCTC | 1 cut(s) | 854 |
| Eco47I | GGWCC | 3 cut(s) | 513, 1446, 1758 |
| Eco52I | CGGCCG | 1 cut(s) | 1038 |
| Eco53kI | GAGCTC | 4 cut(s) | 34, 472, 535, 727 |
| Eco57I | CTGAAG | 1 cut(s) | 698 |
| Eco88I | CYCGRG | 4 cut(s) | 90, 502, 728, 929 |
| EcoICRI | GAGCTC | 4 cut(s) | 34, 472, 535, 727 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 772 |
| EcoO109I | RGGNCCY | 3 cut(s) | 871, 1446, 1758 |
| EcoRI | GAATTC | 1 cut(s) | 398 |
| EcoRII | CCWGG | 3 cut(s) | 621, 819, 1851 |
| EcoT14I | CCWWGG | 3 cut(s) | 240, 762, 1308 |
| EcoT38I | GRGCYC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| ErhI | CCWWGG | 3 cut(s) | 240, 762, 1308 |
| FaeI | CATG | 7 cut(s) | 103, 172, 244, 380, 859, 962, 1583 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1292, 1324, 1582, 1614 |
| FaqI | GGGAC | 3 cut(s) | 80, 1432, 1864 |
| FatI | CATG | 7 cut(s) | 99, 168, 240, 376, 855, 958, 1579 |
| FauI | CCCGC | 1 cut(s) | 33 |
| FblI | GTMKAC | 2 cut(s) | 408, 627 |
| FriOI | GRGCYC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| FspBI | CTAG | 3 cut(s) | 246, 674, 1521 |
| GlaI | GCGC | 2 cut(s) | 98, 757 |
| GsaI | CCCAGC | 3 cut(s) | 67, 1705, 1885 |
| GsuI | CTGGAG | 1 cut(s) | 337 |
| HgaI | GACGC | 5 cut(s) | 47, 313, 625, 854, 971 |
| HhaI | GCGC | 2 cut(s) | 99, 758 |
| Hin1I | GRCGYC | 3 cut(s) | 324, 702, 846 |
| Hin1II | CATG | 7 cut(s) | 103, 172, 244, 380, 859, 962, 1583 |
| Hin6I | GCGC | 2 cut(s) | 97, 756 |
| HinP1I | GCGC | 2 cut(s) | 97, 756 |
| HincII | GTYRAC | 1 cut(s) | 409 |
| HindII | GTYRAC | 1 cut(s) | 409 |
| HphI | GGTGA | 6 cut(s) | 3, 304, 571, 1139, 1268, 1555 |
| Hpy166II | GTNNAC | 3 cut(s) | 409, 516, 628 |
| Hpy8I | GTNNAC | 3 cut(s) | 409, 516, 628 |
| HpyAV | CCTTC | 3 cut(s) | 104, 1540, 1859 |
| HpyCH4III | ACNGT | 2 cut(s) | 747, 865 |
| HpyCH4IV | ACGT | 1 cut(s) | 702 |
| HpyCH4V | TGCA | 5 cut(s) | 142, 618, 771, 1318, 1345 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 185, 214, 764, 808, 918, 934, 1067, 1111, 1391 |
| HpyF3I | CTNAG | 5 cut(s) | 81, 689, 1368, 1457, 1706 |
| HpySE526I | ACGT | 1 cut(s) | 702 |
| Hsp92I | GRCGYC | 3 cut(s) | 324, 702, 846 |
| Hsp92II | CATG | 7 cut(s) | 103, 172, 244, 380, 859, 962, 1583 |
| HspAI | GCGC | 2 cut(s) | 97, 756 |
| KflI | GGGWCCC | 1 cut(s) | 1446 |
| Kpn2I | TCCGGA | 1 cut(s) | 1804 |
| KpnI | GGTACC | 2 cut(s) | 1133, 1694 |
| KroI | GCCGGC | 1 cut(s) | 599 |
| KroNI | GCCGGC | 1 cut(s) | 601 |
| KspI | CCGCGG | 1 cut(s) | 484 |
| LguI | GCTCTTC | 2 cut(s) | 893, 944 |
| Lsp1109I | GCAGC | 3 cut(s) | 645, 1526, 1704 |
| LweI | GCATC | 9 cut(s) | 86, 534, 544, 627, 780, 834, 921, 1372, 1810 |
| MaeI | CTAG | 3 cut(s) | 246, 674, 1521 |
| MaeII | ACGT | 1 cut(s) | 702 |
| MaeIII | GTNAC | 2 cut(s) | 266, 1575 |
| MbiI | CCGCTC | 2 cut(s) | 586, 924 |
| MflI | RGATCY | 3 cut(s) | 738, 1044, 1898 |
| MhlI | GDGCHC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| MluCI | AATT | 7 cut(s) | 398, 1143, 1171, 1289, 1346, 1351, 1903 |
| MlyI | GAGTC | 6 cut(s) | 62, 299, 986, 1028, 1150, 1666 |
| MmeI | TCCRAC | 3 cut(s) | 184, 766, 1065 |
| MroI | TCCGGA | 1 cut(s) | 1804 |
| MroNI | GCCGGC | 1 cut(s) | 599 |
| MroXI | GAANNNNTTC | 1 cut(s) | 938 |
| MseI | TTAA | 3 cut(s) | 1350, 1440, 1644 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1584 |
| MspA1I | CMGCKG | 2 cut(s) | 63, 483 |
| MvaI | CCWGG | 3 cut(s) | 623, 821, 1853 |
| MvnI | CGCG | 5 cut(s) | 41, 120, 483, 756, 1246 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 185, 214, 764, 808, 918, 934, 1067, 1111, 1391 |
| NaeI | GCCGGC | 1 cut(s) | 601 |
| NciI | CCSGG | 7 cut(s) | 91, 92, 333, 530, 875, 1134, 1240 |
| NcoI | CCATGG | 1 cut(s) | 240 |
| NgoMIV | GCCGGC | 1 cut(s) | 599 |
| NlaIII | CATG | 7 cut(s) | 103, 172, 244, 380, 859, 962, 1583 |
| NmeAIII | GCCGAG | 3 cut(s) | 607, 925, 1066 |
| NspI | RCATGY | 1 cut(s) | 1583 |
| NspV | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| PaeR7I | CTCGAG | 2 cut(s) | 502, 728 |
| PceI | AGGCCT | 1 cut(s) | 767 |
| PciI | ACATGT | 1 cut(s) | 1579 |
| PciSI | GCTCTTC | 2 cut(s) | 893, 944 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 408, 500 |
| PdiI | GCCGGC | 1 cut(s) | 601 |
| PdmI | GAANNNNTTC | 1 cut(s) | 938 |
| PfeI | GAWTC | 7 cut(s) | 488, 656, 946, 1004, 1030, 1078, 1697 |
| PflFI | GACNNNGTC | 1 cut(s) | 125 |
| PfoI | TCCNGGA | 2 cut(s) | 528, 1851 |
| PleI | GAGTC | 6 cut(s) | 62, 299, 986, 1027, 1150, 1666 |
| PpsI | GAGTC | 6 cut(s) | 62, 299, 986, 1027, 1150, 1666 |
| PpuMI | RGGWCCY | 2 cut(s) | 1446, 1758 |
| PscI | ACATGT | 1 cut(s) | 1579 |
| PsiI | TTATAA | 1 cut(s) | 1197 |
| Psp124BI | GAGCTC | 4 cut(s) | 36, 474, 537, 729 |
| Psp5II | RGGWCCY | 2 cut(s) | 1446, 1758 |
| Psp6I | CCWGG | 3 cut(s) | 621, 819, 1851 |
| PspFI | CCCAGC | 3 cut(s) | 63, 1701, 1881 |
| PspGI | CCWGG | 3 cut(s) | 621, 819, 1851 |
| PspOMI | GGGCCC | 1 cut(s) | 871 |
| PspPI | GGNCC | 6 cut(s) | 88, 513, 871, 872, 1446, 1758 |
| PspPPI | RGGWCCY | 2 cut(s) | 1446, 1758 |
| PspXI | VCTCGAGB | 2 cut(s) | 502, 728 |
| PsuI | RGATCY | 3 cut(s) | 738, 1044, 1898 |
| PsyI | GACNNNGTC | 1 cut(s) | 125 |
| RsaI | GTAC | 4 cut(s) | 1131, 1141, 1250, 1692 |
| RsaNI | GTAC | 4 cut(s) | 1130, 1140, 1249, 1691 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1584 |
| SacI | GAGCTC | 4 cut(s) | 36, 474, 537, 729 |
| SacII | CCGCGG | 1 cut(s) | 484 |
| SalI | GTCGAC | 1 cut(s) | 407 |
| SapI | GCTCTTC | 2 cut(s) | 893, 944 |
| SaqAI | TTAA | 3 cut(s) | 1350, 1440, 1644 |
| Sau96I | GGNCC | 6 cut(s) | 88, 513, 871, 872, 1446, 1758 |
| SchI | GAGTC | 6 cut(s) | 62, 299, 986, 1028, 1150, 1666 |
| SduI | GDGCHC | 6 cut(s) | 36, 303, 474, 537, 729, 875 |
| SfaNI | GCATC | 9 cut(s) | 86, 534, 544, 627, 780, 834, 921, 1372, 1810 |
| SfcI | CTRYAG | 2 cut(s) | 508, 520 |
| Sfr274I | CTCGAG | 2 cut(s) | 502, 728 |
| Sfr303I | CCGCGG | 1 cut(s) | 484 |
| SfuI | TTCGAA | 3 cut(s) | 108, 402, 1002 |
| SgrBI | CCGCGG | 1 cut(s) | 484 |
| SinI | GGWCC | 3 cut(s) | 513, 1446, 1758 |
| SlaI | CTCGAG | 2 cut(s) | 502, 728 |
| SmaI | CCCGGG | 1 cut(s) | 92 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1584 |
| SmlI | CTYRAG | 6 cut(s) | 502, 607, 728, 1483, 1674, 1888 |
| SmoI | CTYRAG | 6 cut(s) | 502, 607, 728, 1483, 1674, 1888 |
| SpeI | ACTAGT | 1 cut(s) | 1520 |
| Sse9I | AATT | 7 cut(s) | 398, 1143, 1171, 1289, 1346, 1351, 1903 |
| SseBI | AGGCCT | 1 cut(s) | 767 |
| SspMI | CTAG | 3 cut(s) | 246, 674, 1521 |
| SstI | GAGCTC | 4 cut(s) | 36, 474, 537, 729 |
| StuI | AGGCCT | 1 cut(s) | 767 |
| StyI | CCWWGG | 3 cut(s) | 240, 762, 1308 |
| TaaI | ACNGT | 2 cut(s) | 747, 865 |
| TaiI | ACGT | 1 cut(s) | 705 |
| TasI | AATT | 7 cut(s) | 398, 1143, 1171, 1289, 1346, 1351, 1903 |
| TfiI | GAWTC | 7 cut(s) | 488, 656, 946, 1004, 1030, 1078, 1697 |
| Tru1I | TTAA | 3 cut(s) | 1350, 1440, 1644 |
| Tru9I | TTAA | 3 cut(s) | 1350, 1440, 1644 |
| TscAI | CASTG | 1 cut(s) | 722 |
| TseI | GCWGC | 3 cut(s) | 633, 1514, 1717 |
| TspDTI | ATGAA | 6 cut(s) | 168, 844, 1184, 1409, 1424, 1655 |
| TspGWI | ACGGA | 2 cut(s) | 254, 1816 |
| TspMI | CCCGGG | 1 cut(s) | 90 |
| TspRI | CASTG | 1 cut(s) | 722 |
| Tth111I | GACNNNGTC | 1 cut(s) | 125 |
| VpaK11BI | GGWCC | 3 cut(s) | 513, 1446, 1758 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 772 |
| XapI | RAATTY | 1 cut(s) | 398 |
| XceI | RCATGY | 1 cut(s) | 1583 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1273, 1790 |
| XhoI | CTCGAG | 2 cut(s) | 502, 728 |
| XmaI | CCCGGG | 1 cut(s) | 90 |
| XmiI | GTMKAC | 2 cut(s) | 408, 627 |
| XmnI | GAANNNNTTC | 1 cut(s) | 938 |
| XspI | CTAG | 3 cut(s) | 246, 674, 1521 |
| ZraI | GACGTC | 1 cut(s) | 703 |