Citrate synthase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0133621 RchiOBHm_Chr4g0410741 |
| rosa_roxburghii | Rroxscaffold_3G00222300 Rroxscaffold_7G00203320 |
| rosa_samantha | Rh2BG057200 Rh2CG059200 Rh2DG388400 Rh5AG143600 Rh5CG558700 |
| rosa_wichuraiana | Rw2G029790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 114 |
| AgsI | TTSAA | 1 cut(s) | 223 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 256 |
| AjnI | CCWGG | 2 cut(s) | 144, 346 |
| AluBI | AGCT | 2 cut(s) | 24, 332 |
| AluI | AGCT | 2 cut(s) | 24, 332 |
| Alw26I | GTCTC | 1 cut(s) | 264 |
| AsuHPI | GGTGA | 1 cut(s) | 161 |
| BciT130I | CCWGG | 2 cut(s) | 146, 348 |
| BcoDI | GTCTC | 1 cut(s) | 264 |
| BfaI | CTAG | 4 cut(s) | 48, 272, 339, 352 |
| Bme1390I | CCNGG | 2 cut(s) | 146, 348 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 256 |
| BmiI | GGNNCC | 1 cut(s) | 203 |
| BmrFI | CCNGG | 2 cut(s) | 146, 348 |
| BmrI | ACTGGG | 1 cut(s) | 85 |
| BmsI | GCATC | 1 cut(s) | 235 |
| BmuI | ACTGGG | 1 cut(s) | 85 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| BpuEI | CTTGAG | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 2 cut(s) | 144, 145 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 114 |
| Bse1I | ACTGG | 2 cut(s) | 91, 139 |
| BseBI | CCWGG | 2 cut(s) | 146, 348 |
| BseDI | CCNNGG | 2 cut(s) | 144, 145 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 114 |
| BseNI | ACTGG | 2 cut(s) | 91, 139 |
| BsgI | GTGCAG | 1 cut(s) | 162 |
| BsiSI | CCGG | 1 cut(s) | 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 114 |
| BsmAI | GTCTC | 1 cut(s) | 264 |
| Bsp143I | GATC | 2 cut(s) | 165, 299 |
| BspHI | TCATGA | 1 cut(s) | 168 |
| BspLI | GGNNCC | 1 cut(s) | 203 |
| BsrI | ACTGG | 2 cut(s) | 91, 139 |
| BssECI | CCNNGG | 2 cut(s) | 144, 145 |
| BssMI | GATC | 2 cut(s) | 165, 299 |
| Bst2UI | CCWGG | 2 cut(s) | 146, 348 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 214 |
| BstDEI | CTNAG | 2 cut(s) | 162, 236 |
| BstKTI | GATC | 2 cut(s) | 168, 302 |
| BstMAI | GTCTC | 1 cut(s) | 264 |
| BstMBI | GATC | 2 cut(s) | 165, 299 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 214 |
| BstNI | CCWGG | 2 cut(s) | 146, 348 |
| BstSCI | CCNGG | 2 cut(s) | 144, 346 |
| BtsIMutI | CAGTG | 1 cut(s) | 132 |
| CciI | TCATGA | 1 cut(s) | 168 |
| CviAII | CATG | 2 cut(s) | 126, 169 |
| CviJI | RGCY | 5 cut(s) | 24, 118, 202, 332, 351 |
| CviKI_1 | RGCY | 5 cut(s) | 24, 118, 202, 332, 351 |
| DdeI | CTNAG | 2 cut(s) | 162, 236 |
| DpnI | GATC | 2 cut(s) | 167, 301 |
| DpnII | GATC | 2 cut(s) | 165, 299 |
| DriI | GACNNNNNGTC | 1 cut(s) | 256 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 256 |
| EcoRII | CCWGG | 2 cut(s) | 144, 346 |
| FaeI | CATG | 2 cut(s) | 129, 172 |
| FaiI | YATR | 7 cut(s) | 59, 127, 170, 187, 189, 213, 215 |
| FatI | CATG | 2 cut(s) | 125, 168 |
| FspBI | CTAG | 4 cut(s) | 48, 272, 339, 352 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HapII | CCGG | 1 cut(s) | 205 |
| Hin1II | CATG | 2 cut(s) | 129, 172 |
| HincII | GTYRAC | 1 cut(s) | 15 |
| HindII | GTYRAC | 1 cut(s) | 15 |
| HinfI | GANTC | 3 cut(s) | 140, 152, 335 |
| HpaI | GTTAAC | 1 cut(s) | 15 |
| HpaII | CCGG | 1 cut(s) | 205 |
| HphI | GGTGA | 1 cut(s) | 161 |
| Hpy166II | GTNNAC | 1 cut(s) | 15 |
| Hpy188I | TCNGA | 4 cut(s) | 55, 70, 157, 304 |
| Hpy188III | TCNNGA | 3 cut(s) | 169, 297, 339 |
| Hpy8I | GTNNAC | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 5 cut(s) | 103, 179, 248, 268, 287 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 214 |
| HpyF3I | CTNAG | 2 cut(s) | 162, 236 |
| Hsp92II | CATG | 2 cut(s) | 129, 172 |
| KspAI | GTTAAC | 1 cut(s) | 15 |
| Kzo9I | GATC | 2 cut(s) | 165, 299 |
| LmnI | GCTCC | 1 cut(s) | 207 |
| LpnPI | CCDG | 8 cut(s) | 104, 104, 120, 131, 158, 167, 218, 333 |
| LweI | GCATC | 1 cut(s) | 235 |
| MaeI | CTAG | 4 cut(s) | 48, 272, 339, 352 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MalI | GATC | 2 cut(s) | 167, 301 |
| MboI | GATC | 2 cut(s) | 165, 299 |
| MboII | GAAGA | 1 cut(s) | 78 |
| MluCI | AATT | 1 cut(s) | 254 |
| MmeI | TCCRAC | 2 cut(s) | 100, 259 |
| MnlI | CCTC | 1 cut(s) | 165 |
| MseI | TTAA | 1 cut(s) | 14 |
| MspI | CCGG | 1 cut(s) | 205 |
| MspR9I | CCNGG | 2 cut(s) | 146, 348 |
| MvaI | CCWGG | 2 cut(s) | 146, 348 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 214 |
| NdeII | GATC | 2 cut(s) | 165, 299 |
| NlaIII | CATG | 2 cut(s) | 129, 172 |
| NlaIV | GGNNCC | 1 cut(s) | 203 |
| PagI | TCATGA | 1 cut(s) | 168 |
| PasI | CCCWGGG | 1 cut(s) | 145 |
| PfeI | GAWTC | 3 cut(s) | 140, 152, 335 |
| Psp6I | CCWGG | 2 cut(s) | 144, 346 |
| PspGI | CCWGG | 2 cut(s) | 144, 346 |
| PspN4I | GGNNCC | 1 cut(s) | 203 |
| SaqAI | TTAA | 1 cut(s) | 14 |
| Sau3AI | GATC | 2 cut(s) | 165, 299 |
| ScrFI | CCNGG | 2 cut(s) | 146, 348 |
| SetI | ASST | 4 cut(s) | 26, 176, 186, 334 |
| SfaNI | GCATC | 1 cut(s) | 235 |
| SmlI | CTYRAG | 1 cut(s) | 261 |
| SmoI | CTYRAG | 1 cut(s) | 261 |
| Sse9I | AATT | 1 cut(s) | 254 |
| SspMI | CTAG | 4 cut(s) | 48, 272, 339, 352 |
| StyD4I | CCNGG | 2 cut(s) | 144, 346 |
| TaqI | TCGA | 1 cut(s) | 298 |
| TasI | AATT | 1 cut(s) | 254 |
| TfiI | GAWTC | 3 cut(s) | 140, 152, 335 |
| Tru1I | TTAA | 1 cut(s) | 14 |
| Tru9I | TTAA | 1 cut(s) | 14 |
| TscAI | CASTG | 1 cut(s) | 139 |
| TspGWI | ACGGA | 2 cut(s) | 94, 244 |
| TspRI | CASTG | 1 cut(s) | 139 |
| XbaI | TCTAGA | 1 cut(s) | 338 |
| XspI | CTAG | 4 cut(s) | 48, 272, 339, 352 |