Citrate synthase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0133621 RchiOBHm_Chr4g0410741 |
| rosa_roxburghii | Rroxscaffold_3G00222300 Rroxscaffold_7G00203320 |
| rosa_samantha | Rh2BG057200 Rh2CG059200 Rh2DG388400 Rh5AG143600 Rh5CG558700 |
| rosa_wichuraiana | Rw2G029790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 141 |
| AgsI | TTSAA | 1 cut(s) | 250 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 283 |
| AjnI | CCWGG | 1 cut(s) | 171 |
| AluBI | AGCT | 2 cut(s) | 14, 49 |
| AluI | AGCT | 2 cut(s) | 14, 49 |
| AoxI | GGCC | 1 cut(s) | 200 |
| ApeKI | GCWGC | 1 cut(s) | 14 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| BciT130I | CCWGG | 1 cut(s) | 173 |
| BciVI | GTATCC | 1 cut(s) | 63 |
| BfuI | GTATCC | 1 cut(s) | 63 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| Bme1390I | CCNGG | 1 cut(s) | 173 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 283 |
| BmiI | GGNNCC | 1 cut(s) | 230 |
| BmrFI | CCNGG | 1 cut(s) | 173 |
| BmrI | ACTGGG | 1 cut(s) | 112 |
| BmsI | GCATC | 1 cut(s) | 262 |
| BmuI | ACTGGG | 1 cut(s) | 112 |
| BpmI | CTGGAG | 2 cut(s) | 26, 183 |
| BsaJI | CCNNGG | 2 cut(s) | 171, 172 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 141 |
| Bse1I | ACTGG | 2 cut(s) | 118, 166 |
| BseBI | CCWGG | 1 cut(s) | 173 |
| BseDI | CCNNGG | 2 cut(s) | 171, 172 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 141 |
| BseNI | ACTGG | 2 cut(s) | 118, 166 |
| BsgI | GTGCAG | 1 cut(s) | 189 |
| BshFI | GGCC | 1 cut(s) | 202 |
| BsiSI | CCGG | 1 cut(s) | 232 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 141 |
| BsnI | GGCC | 1 cut(s) | 202 |
| Bsp143I | GATC | 1 cut(s) | 192 |
| BspANI | GGCC | 1 cut(s) | 202 |
| BspHI | TCATGA | 1 cut(s) | 195 |
| BspLI | GGNNCC | 1 cut(s) | 230 |
| BsrI | ACTGG | 2 cut(s) | 118, 166 |
| BssECI | CCNNGG | 2 cut(s) | 171, 172 |
| BssMI | GATC | 1 cut(s) | 192 |
| Bst2UI | CCWGG | 1 cut(s) | 173 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 241 |
| BstC8I | GCNNGC | 1 cut(s) | 204 |
| BstDEI | CTNAG | 2 cut(s) | 189, 263 |
| BstKTI | GATC | 1 cut(s) | 195 |
| BstMBI | GATC | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 241 |
| BstNI | CCWGG | 1 cut(s) | 173 |
| BstSCI | CCNGG | 1 cut(s) | 171 |
| BsuI | GTATCC | 1 cut(s) | 63 |
| BsuRI | GGCC | 1 cut(s) | 202 |
| BtsIMutI | CAGTG | 1 cut(s) | 159 |
| Cac8I | GCNNGC | 1 cut(s) | 204 |
| CciI | TCATGA | 1 cut(s) | 195 |
| CviAII | CATG | 2 cut(s) | 153, 196 |
| CviJI | RGCY | 5 cut(s) | 14, 49, 145, 202, 229 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 49, 145, 202, 229 |
| DdeI | CTNAG | 2 cut(s) | 189, 263 |
| DpnI | GATC | 1 cut(s) | 194 |
| DpnII | GATC | 1 cut(s) | 192 |
| DriI | GACNNNNNGTC | 1 cut(s) | 283 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 283 |
| Eco147I | AGGCCT | 1 cut(s) | 202 |
| EcoRII | CCWGG | 1 cut(s) | 171 |
| FaeI | CATG | 2 cut(s) | 156, 199 |
| FaiI | YATR | 8 cut(s) | 75, 86, 154, 197, 214, 216, 240, 242 |
| FatI | CATG | 2 cut(s) | 152, 195 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| GluI | GCNGC | 1 cut(s) | 15 |
| GsuI | CTGGAG | 2 cut(s) | 26, 183 |
| HaeIII | GGCC | 1 cut(s) | 202 |
| HapII | CCGG | 1 cut(s) | 232 |
| Hin1II | CATG | 2 cut(s) | 156, 199 |
| HincII | GTYRAC | 1 cut(s) | 40 |
| HindII | GTYRAC | 1 cut(s) | 40 |
| HinfI | GANTC | 2 cut(s) | 167, 179 |
| HpaI | GTTAAC | 1 cut(s) | 40 |
| HpaII | CCGG | 1 cut(s) | 232 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 3 cut(s) | 82, 97, 184 |
| Hpy188III | TCNNGA | 1 cut(s) | 196 |
| Hpy8I | GTNNAC | 1 cut(s) | 40 |
| HpyCH4V | TGCA | 4 cut(s) | 17, 130, 206, 275 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 241 |
| HpyF3I | CTNAG | 2 cut(s) | 189, 263 |
| Hsp92II | CATG | 2 cut(s) | 156, 199 |
| KspAI | GTTAAC | 1 cut(s) | 40 |
| Kzo9I | GATC | 1 cut(s) | 192 |
| LmnI | GCTCC | 1 cut(s) | 234 |
| LpnPI | CCDG | 8 cut(s) | 131, 131, 147, 158, 185, 194, 216, 245 |
| LweI | GCATC | 1 cut(s) | 262 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MalI | GATC | 1 cut(s) | 194 |
| MboI | GATC | 1 cut(s) | 192 |
| MboII | GAAGA | 1 cut(s) | 105 |
| MluCI | AATT | 1 cut(s) | 281 |
| MmeI | TCCRAC | 1 cut(s) | 127 |
| MnlI | CCTC | 2 cut(s) | 146, 192 |
| MseI | TTAA | 1 cut(s) | 39 |
| MspI | CCGG | 1 cut(s) | 232 |
| MspR9I | CCNGG | 1 cut(s) | 173 |
| MvaI | CCWGG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 241 |
| NdeII | GATC | 1 cut(s) | 192 |
| NlaIII | CATG | 2 cut(s) | 156, 199 |
| NlaIV | GGNNCC | 1 cut(s) | 230 |
| PagI | TCATGA | 1 cut(s) | 195 |
| PasI | CCCWGGG | 1 cut(s) | 172 |
| PceI | AGGCCT | 1 cut(s) | 202 |
| PfeI | GAWTC | 2 cut(s) | 167, 179 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| Psp6I | CCWGG | 1 cut(s) | 171 |
| PspGI | CCWGG | 1 cut(s) | 171 |
| PspN4I | GGNNCC | 1 cut(s) | 230 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 1 cut(s) | 192 |
| ScrFI | CCNGG | 1 cut(s) | 173 |
| SetI | ASST | 3 cut(s) | 16, 51, 213 |
| SfaNI | GCATC | 1 cut(s) | 262 |
| Sse9I | AATT | 1 cut(s) | 281 |
| SseBI | AGGCCT | 1 cut(s) | 202 |
| StuI | AGGCCT | 1 cut(s) | 202 |
| StyD4I | CCNGG | 1 cut(s) | 171 |
| TaqI | TCGA | 1 cut(s) | 138 |
| TasI | AATT | 1 cut(s) | 281 |
| TfiI | GAWTC | 2 cut(s) | 167, 179 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TscAI | CASTG | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 14 |
| TspGWI | ACGGA | 2 cut(s) | 121, 271 |
| TspRI | CASTG | 1 cut(s) | 166 |